RNA–Protein interactions for RNA: ENSMUST00000198359.1

Trav13n-1-201, Transcript of T cell receptor alpha variable 13N-1 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav13n-1, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1-201ENSMUST00000198359 Cdc42bpaQ3UU96 1719 aa10.89□□□□□ -0.67
Trav13n-1-201ENSMUST00000198359 Topaz1E5FYH1 1653 aa10.89□□□□□ -0.67
Trav13n-1-201ENSMUST00000198359 Trappc8E9PWG2 1437 aa10.88□□□□□ -0.67
Trav13n-1-201ENSMUST00000198359 Dip2bQ3UH60 1574 aa10.88□□□□□ -0.67
Trav13n-1-201ENSMUST00000198359 Iqsec2Q5DU25 1478 aa10.87□□□□□ -0.67
Trav13n-1-201ENSMUST00000198359 Setd5Q5XJV7 1441 aa10.86□□□□□ -0.67
Trav13n-1-201ENSMUST00000198359 Abcc3B2RX12 1523 aa10.86□□□□□ -0.67
Trav13n-1-201ENSMUST00000198359 Hspa1lP16627 641 aa10.86□□□□□ -0.67
Trav13n-1-201ENSMUST00000198359 Lmo7E9PYF4 1699 aaKnown RBP10.85□□□□□ -0.67
Trav13n-1-201ENSMUST00000198359 Ncoa1P70365 1447 aa10.85□□□□□ -0.67
Trav13n-1-201ENSMUST00000198359 Bcl9Q9D219 1425 aa10.85□□□□□ -0.67
Trav13n-1-201ENSMUST00000198359 Arhgef40Q3UPH7 1517 aa10.85□□□□□ -0.67
Trav13n-1-201ENSMUST00000198359 Pdcd11Q6NS46 1862 aaKnown RBP10.85□□□□□ -0.67
Trav13n-1-201ENSMUST00000198359 Ap3b1Q9Z1T1 1105 aa10.82□□□□□ -0.68
Trav13n-1-201ENSMUST00000198359 Hecw1Q8K4P8 1604 aa10.81□□□□□ -0.68
Trav13n-1-201ENSMUST00000198359 Npm3Q9CPP0 175 aaKnown RBP10.81□□□□□ -0.68
Trav13n-1-201ENSMUST00000198359 Spock2Q9ER58 423 aa10.81□□□□□ -0.68
Trav13n-1-201ENSMUST00000198359 Tdrd9Q14BI7 1383 aa10.8□□□□□ -0.68
Trav13n-1-201ENSMUST00000198359 Fbln2P37889 1221 aa10.8□□□□□ -0.68
Trav13n-1-201ENSMUST00000198359 Sart1Q9Z315 806 aaKnown RBP10.8□□□□□ -0.68
Trav13n-1-201ENSMUST00000198359 Gm32742A0A1B0GT42 1604 aa10.8□□□□□ -0.68
Trav13n-1-201ENSMUST00000198359 Trpm2Q91YD4 1506 aa10.79□□□□□ -0.68
Trav13n-1-201ENSMUST00000198359 Trpm1Q2TV84 1622 aa10.79□□□□□ -0.68
Trav13n-1-201ENSMUST00000198359 Pcf11G3X9Z4 1553 aa10.78□□□□□ -0.68
Trav13n-1-201ENSMUST00000198359 Cfap74Q3UY96 1578 aa10.78□□□□□ -0.68
Trav13n-1-201ENSMUST00000198359 Mkrn3Q60764 544 aa10.77□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 Gli3Q61602 1583 aa10.77□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 Cdc42bpgQ80UW5 1551 aa10.77□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 Knl1Q66JQ7 1612 aa10.76□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 Zbtb22Q9Z0G7 638 aa10.76□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 Eea1Q8BL66 1411 aa10.75□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 Cdc42bpbQ7TT50 1713 aa10.75□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 GphnQ8BUV3 769 aaKnown RBP10.75□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 CntlnA2AM05 1397 aa10.75□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 Gm1043A0A140LJC2 1431 aa10.75□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 Naip6Q9JIB6 1403 aa10.75□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 Peg3Q3URU2 1571 aa10.74□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 CltcQ68FD5 1675 aaKnown RBP10.74□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 Lmod2Q3UHZ5 550 aa10.74□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 Rapgef3Q8VCC8 918 aa10.74□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 Nos1Q9Z0J4 1429 aa10.74□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 Med14A2ABV5 1459 aaKnown RBP10.74□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 Gemin5Q8BX17 1502 aaKnown RBP10.74□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 RictorQ6QI06 1708 aa10.73□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 Map3k5O35099 1380 aa10.73□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 Caskin1Q6P9K8 1431 aa10.73□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 Fhod3Q76LL6 1578 aa10.73□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 Rimbp3Q3V0F0 1606 aa10.73□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 Slc4a2P13808 1237 aaKnown RBP10.72□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 NexmifQ5DTT1 1515 aa10.72□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 Phlpp1Q8CHE4 1687 aa10.72□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 AlkP97793 1621 aa10.71□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 Gli2Q0VGT2 1544 aa10.71□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 Tiam1Q60610 1591 aa10.71□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 Skida1Q80YR3 822 aa10.71□□□□□ -0.69
Trav13n-1-201ENSMUST00000198359 PzpQ61838 1495 aa10.7□□□□□ -0.7
Trav13n-1-201ENSMUST00000198359 Adcy10Q8C0T9 1614 aa10.69□□□□□ -0.7
Trav13n-1-201ENSMUST00000198359 Scaf11E9PZM7 1456 aaKnown RBP10.69□□□□□ -0.7
Trav13n-1-201ENSMUST00000198359 Arhgap23Q69ZH9 1483 aa10.69□□□□□ -0.7
Trav13n-1-201ENSMUST00000198359 Kif7B7ZNG0 1348 aa10.68□□□□□ -0.7
Trav13n-1-201ENSMUST00000198359 ArxO35085 564 aa10.68□□□□□ -0.7
Trav13n-1-201ENSMUST00000198359 Rims2Q9EQZ7 1530 aa10.68□□□□□ -0.7
Trav13n-1-201ENSMUST00000198359 HrcG5E8J6 738 aa10.67□□□□□ -0.7
Trav13n-1-201ENSMUST00000198359 Zbtb12Q9Z150 459 aa10.67□□□□□ -0.7
Trav13n-1-201ENSMUST00000198359 Kdm3bQ6ZPY7 1562 aa10.66□□□□□ -0.7
Trav13n-1-201ENSMUST00000198359 Slc24a1Q91WD8 1130 aa10.66□□□□□ -0.7
Trav13n-1-201ENSMUST00000198359 Bcl11bQ99PV8 884 aa10.65□□□□□ -0.7
Trav13n-1-201ENSMUST00000198359 Znf518aB2RRF6 1478 aaKnown RBP10.65□□□□□ -0.7
Trav13n-1-201ENSMUST00000198359 Naip5Q9R016 1403 aa10.64□□□□□ -0.71
Trav13n-1-201ENSMUST00000198359 Zc3h13E9Q784 1729 aaKnown RBP10.64□□□□□ -0.71
Trav13n-1-201ENSMUST00000198359 Gm13697A2AK42 830 aa10.63□□□□□ -0.71
Trav13n-1-201ENSMUST00000198359 Ubap1lG3UW59 384 aa10.63□□□□□ -0.71
Trav13n-1-201ENSMUST00000198359 Zbtb7aO88939 569 aaKnown RBP10.63□□□□□ -0.71
Trav13n-1-201ENSMUST00000198359 Kif3bQ61771 747 aa10.63□□□□□ -0.71
Trav13n-1-201ENSMUST00000198359 Cdk11bP24788 784 aaKnown RBP10.62□□□□□ -0.71
Trav13n-1-201ENSMUST00000198359 Uggt2E9Q4X2 1504 aa10.62□□□□□ -0.71
Trav13n-1-201ENSMUST00000198359 Naip1Q9QWK5 1403 aa10.6□□□□□ -0.71
Trav13n-1-201ENSMUST00000198359 Rrp7aQ9D1C9 280 aaKnown RBP10.6□□□□□ -0.71
Trav13n-1-201ENSMUST00000198359 Xrn1P97789 1719 aaKnown RBP10.6□□□□□ -0.71
Trav13n-1-201ENSMUST00000198359 DroshaQ5HZJ0 1373 aaKnown RBP10.6□□□□□ -0.71
Trav13n-1-201ENSMUST00000198359 Ccnb3Q810T2 1396 aa10.6□□□□□ -0.71
Trav13n-1-201ENSMUST00000198359 Abcc6Q9R1S7 1498 aa10.6□□□□□ -0.71
Trav13n-1-201ENSMUST00000198359 Rnf216P58283 853 aa10.59□□□□□ -0.71
Trav13n-1-201ENSMUST00000198359 Ferd3lQ923Z4 168 aa10.59□□□□□ -0.71
Trav13n-1-201ENSMUST00000198359 Lmtk2Q3TYD6 1471 aa10.58□□□□□ -0.72
Trav13n-1-201ENSMUST00000198359 Topbp1Q6ZQF0 1515 aa10.58□□□□□ -0.72
Trav13n-1-201ENSMUST00000198359 Tubgcp6G5E8P0 1769 aa10.57□□□□□ -0.72
Trav13n-1-201ENSMUST00000198359 Nrxn3Q6P9K9 1571 aa10.57□□□□□ -0.72
Trav13n-1-201ENSMUST00000198359 Spryd3E9Q9B3 442 aa10.57□□□□□ -0.72
Trav13n-1-201ENSMUST00000198359 Gtpbp6Q3U6U5 514 aa10.57□□□□□ -0.72
Trav13n-1-201ENSMUST00000198359 MycnP03966 462 aaKnown RBP10.56□□□□□ -0.72
Trav13n-1-201ENSMUST00000198359 Egfem1Q8C088 590 aa10.56□□□□□ -0.72
Trav13n-1-201ENSMUST00000198359 Hfm1D3Z4R1 1434 aa10.56□□□□□ -0.72
Trav13n-1-201ENSMUST00000198359 Plch2A2AP18 1501 aa10.55□□□□□ -0.72
Trav13n-1-201ENSMUST00000198359 Amigo3Q8C2S7 508 aa10.55□□□□□ -0.72
Trav13n-1-201ENSMUST00000198359 Chd2E9PZM4 1827 aaKnown RBP10.55□□□□□ -0.72
Trav13n-1-201ENSMUST00000198359 Fmn2Q9JL04 1578 aa10.55□□□□□ -0.72
Trav13n-1-201ENSMUST00000198359 Iqgap1Q9JKF1 1657 aaKnown RBP10.54□□□□□ -0.72
Trav13n-1-201ENSMUST00000198359 Cypt2Q6P924 180 aa10.54□□□□□ -0.72
Trav13n-1-201ENSMUST00000198359 TimelessQ9R1X4 1197 aa10.54□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms