RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 Pla2r1Q62028 1487 aa14.13□□□□□ -0.15
Msh3-202ENSMUST00000185852 Vps8Q0P5W1 1427 aa14.13□□□□□ -0.15
Msh3-202ENSMUST00000185852 TchhA0A0B4J1F9 1599 aa14.13□□□□□ -0.15
Msh3-202ENSMUST00000185852 Cd109Q8R422 1442 aa14.13□□□□□ -0.15
Msh3-202ENSMUST00000185852 Kif21aQ9QXL2 1672 aa14.12□□□□□ -0.15
Msh3-202ENSMUST00000185852 Esx1O88933 382 aa14.12□□□□□ -0.15
Msh3-202ENSMUST00000185852 Znf330Q922H9 316 aa14.12□□□□□ -0.15
Msh3-202ENSMUST00000185852 Amer1Q7TS75 1132 aa14.11□□□□□ -0.15
Msh3-202ENSMUST00000185852 Magi1Q6RHR9 1471 aa14.11□□□□□ -0.15
Msh3-202ENSMUST00000185852 Thoc2B1AZI6 1594 aaKnown RBP14.1□□□□□ -0.15
Msh3-202ENSMUST00000185852 Fam135aQ6NS59 1506 aa14.1□□□□□ -0.15
Msh3-202ENSMUST00000185852 Gm156Q58A37 223 aa14.1□□□□□ -0.15
Msh3-202ENSMUST00000185852 Puf60Q3UEB3 564 aaKnown RBP14.09□□□□□ -0.15
Msh3-202ENSMUST00000185852 Q7TT23 1179 aa14.09□□□□□ -0.15
Msh3-202ENSMUST00000185852 Tnnt1O88346 262 aa14.09□□□□□ -0.15
Msh3-202ENSMUST00000185852 Ythdc2B2RR83 1445 aaKnown RBP14.08□□□□□ -0.16
Msh3-202ENSMUST00000185852 ErbinQ80TH2 1402 aa14.08□□□□□ -0.16
Msh3-202ENSMUST00000185852 Tmco5bQ80X59 307 aa14.08□□□□□ -0.16
Msh3-202ENSMUST00000185852 WizO88286 1684 aaKnown RBP14.07□□□□□ -0.16
Msh3-202ENSMUST00000185852 Fgd1P52734 960 aa14.07□□□□□ -0.16
Msh3-202ENSMUST00000185852 Gm1043A0A140LJC2 1431 aa14.07□□□□□ -0.16
Msh3-202ENSMUST00000185852 Rpgrip1lQ8CG73 1264 aa14.07□□□□□ -0.16
Msh3-202ENSMUST00000185852 Naip2Q9QUK4 1447 aa14.06□□□□□ -0.16
Msh3-202ENSMUST00000185852 Trim30dE9PWL0 497 aa14.06□□□□□ -0.16
Msh3-202ENSMUST00000185852 BC005561E9Q5E2 1589 aa14.06□□□□□ -0.16
Msh3-202ENSMUST00000185852 Prdm16A2A935 1275 aa14.05□□□□□ -0.16
Msh3-202ENSMUST00000185852 Fam184bQ0KK56 942 aa14.05□□□□□ -0.16
Msh3-202ENSMUST00000185852 TnnQ80Z71 1560 aa14.05□□□□□ -0.16
Msh3-202ENSMUST00000185852 Kif7B7ZNG0 1348 aa14.04□□□□□ -0.16
Msh3-202ENSMUST00000185852 Trappc8E9PWG2 1437 aa14.04□□□□□ -0.16
Msh3-202ENSMUST00000185852 Golga2Q921M4 999 aa14.04□□□□□ -0.16
Msh3-202ENSMUST00000185852 Smg6P61406 1418 aaKnown RBP14.04□□□□□ -0.16
Msh3-202ENSMUST00000185852 Upf2A2AT37 1269 aaKnown RBP14.03□□□□□ -0.16
Msh3-202ENSMUST00000185852 Mak16Q8BGS0 296 aaKnown RBP14.03□□□□□ -0.16
Msh3-202ENSMUST00000185852 Fam71e1A1L3C1 212 aa14.03□□□□□ -0.16
Msh3-202ENSMUST00000185852 4930567H17RikQ3V0K5 233 aa14.03□□□□□ -0.16
Msh3-202ENSMUST00000185852 Atp10dQ8K2X1 1416 aa14.03□□□□□ -0.16
Msh3-202ENSMUST00000185852 Zscan10Q3URR7 782 aa14.03□□□□□ -0.16
Msh3-202ENSMUST00000185852 Atp2b2Q9R0K7 1198 aa14.02□□□□□ -0.16
Msh3-202ENSMUST00000185852 DaxxO35613 739 aa14.02□□□□□ -0.17
Msh3-202ENSMUST00000185852 Cabp4Q8VHC5 271 aa14.02□□□□□ -0.17
Msh3-202ENSMUST00000185852 Zranb1Q7M760 708 aa14.02□□□□□ -0.17
Msh3-202ENSMUST00000185852 Ggt6Q6PDE7 497 aa14□□□□□ -0.17
Msh3-202ENSMUST00000185852 Tsen2Q6P7W5 460 aa14□□□□□ -0.17
Msh3-202ENSMUST00000185852 Ubap1lG3UW59 384 aa14□□□□□ -0.17
Msh3-202ENSMUST00000185852 Cluap1Q8R3P7 413 aa14□□□□□ -0.17
Msh3-202ENSMUST00000185852 Magi3Q9EQJ9 1476 aa13.99□□□□□ -0.17
Msh3-202ENSMUST00000185852 Ankrd36D3Z4K0 1415 aa13.99□□□□□ -0.17
Msh3-202ENSMUST00000185852 Ksr2Q3UVC0 959 aa13.98□□□□□ -0.17
Msh3-202ENSMUST00000185852 Shroom2A2ALU4 1481 aa13.98□□□□□ -0.17
Msh3-202ENSMUST00000185852 Nsd2Q8BVE8 1365 aa13.97□□□□□ -0.17
Msh3-202ENSMUST00000185852 Washc2Q6PGL7 1334 aa13.97□□□□□ -0.17
Msh3-202ENSMUST00000185852 Slc4a2P13808 1237 aaKnown RBP13.97□□□□□ -0.17
Msh3-202ENSMUST00000185852 CenpjQ569L8 1344 aa13.96□□□□□ -0.17
Msh3-202ENSMUST00000185852 Il16O54824 1322 aa13.96□□□□□ -0.17
Msh3-202ENSMUST00000185852 Prex2Q3LAC4 1598 aa13.94□□□□□ -0.18
Msh3-202ENSMUST00000185852 Vsig10D3YX43 558 aa13.94□□□□□ -0.18
Msh3-202ENSMUST00000185852 Gm21190A0A0G2JGJ6 266 aa13.94□□□□□ -0.18
Msh3-202ENSMUST00000185852 HnrnpmQ9D0E1 729 aaKnown RBP13.94□□□□□ -0.18
Msh3-202ENSMUST00000185852 Rwdd1Q9CQK7 243 aa13.94□□□□□ -0.18
Msh3-202ENSMUST00000185852 Ap3b2Q9JME5 1082 aa13.94□□□□□ -0.18
Msh3-202ENSMUST00000185852 Ttc21bQ0HA38 1315 aa13.92□□□□□ -0.18
Msh3-202ENSMUST00000185852 Myom3A2ABU4 1439 aa13.91□□□□□ -0.18
Msh3-202ENSMUST00000185852 Apaf1O88879 1249 aa13.91□□□□□ -0.18
Msh3-202ENSMUST00000185852 Igf1rQ60751 1373 aa13.91□□□□□ -0.18
Msh3-202ENSMUST00000185852 Q8BT18 775 aa13.91□□□□□ -0.18
Msh3-202ENSMUST00000185852 Supt16hQ920B9 1047 aa13.91□□□□□ -0.18
Msh3-202ENSMUST00000185852 Evi5lH3BKQ3 813 aa13.89□□□□□ -0.19
Msh3-202ENSMUST00000185852 Rtf1A2AQ19 715 aaKnown RBP13.88□□□□□ -0.19
Msh3-202ENSMUST00000185852 Arhgef40Q3UPH7 1517 aa13.88□□□□□ -0.19
Msh3-202ENSMUST00000185852 Bcl11bQ99PV8 884 aa13.88□□□□□ -0.19
Msh3-202ENSMUST00000185852 Nup160Q9Z0W3 1402 aaKnown RBP13.88□□□□□ -0.19
Msh3-202ENSMUST00000185852 CanxP35564 591 aaKnown RBP13.87□□□□□ -0.19
Msh3-202ENSMUST00000185852 Gsto1O09131 240 aa13.87□□□□□ -0.19
Msh3-202ENSMUST00000185852 GsdmaQ9EST1 446 aa13.87□□□□□ -0.19
Msh3-202ENSMUST00000185852 Pak3Q61036 559 aa13.87□□□□□ -0.19
Msh3-202ENSMUST00000185852 Adgrb2Q8CGM1 1561 aa13.86□□□□□ -0.19
Msh3-202ENSMUST00000185852 Q3TQI7 289 aaKnown RBP13.85□□□□□ -0.19
Msh3-202ENSMUST00000185852 Cc2d1aQ8K1A6 943 aa13.85□□□□□ -0.19
Msh3-202ENSMUST00000185852 Iqcf3Q9D498 203 aa13.85□□□□□ -0.19
Msh3-202ENSMUST00000185852 Eif4g1Q6NZJ6 1600 aaKnown RBP13.85□□□□□ -0.19
Msh3-202ENSMUST00000185852 Ythdc1E9Q5K9 736 aaKnown RBP13.85□□□□□ -0.19
Msh3-202ENSMUST00000185852 Rock1P70335 1354 aa13.85□□□□□ -0.19
Msh3-202ENSMUST00000185852 Abcc1O35379 1528 aa13.85□□□□□ -0.19
Msh3-202ENSMUST00000185852 Nectin2P32507 530 aa13.84□□□□□ -0.19
Msh3-202ENSMUST00000185852 Bcl11aQ9QYE3 773 aa13.84□□□□□ -0.19
Msh3-202ENSMUST00000185852 Fancd2Q80V62 1450 aa13.84□□□□□ -0.19
Msh3-202ENSMUST00000185852 Chmp5Q9D7S9 219 aa13.84□□□□□ -0.19
Msh3-202ENSMUST00000185852 Asxl2Q8BZ32 1370 aa13.84□□□□□ -0.19
Msh3-202ENSMUST00000185852 Hsp90ab1P11499 724 aaKnown RBP13.84□□□□□ -0.19
Msh3-202ENSMUST00000185852 Kcnh8P59111 1102 aa13.83□□□□□ -0.2
Msh3-202ENSMUST00000185852 Znf710Q3U288 666 aa13.83□□□□□ -0.2
Msh3-202ENSMUST00000185852 Nutm1Q8BHP2 1126 aa13.83□□□□□ -0.2
Msh3-202ENSMUST00000185852 Cdk19Q8BWD8 501 aa13.83□□□□□ -0.2
Msh3-202ENSMUST00000185852 Stard8Q8K031 1019 aa13.83□□□□□ -0.2
Msh3-202ENSMUST00000185852 Gapvd1Q6PAR5 1458 aa13.82□□□□□ -0.2
Msh3-202ENSMUST00000185852 Ppp2r1aQ76MZ3 589 aa13.82□□□□□ -0.2
Msh3-202ENSMUST00000185852 Ccdc60Q8C4J0 545 aa13.81□□□□□ -0.2
Msh3-202ENSMUST00000185852 Unc13aQ4KUS2 1712 aa13.81□□□□□ -0.2
Msh3-202ENSMUST00000185852 Rsph4aQ8BYM7 716 aa13.81□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 25.2 ms