RNA–Protein interactions for RNA: ENSMUST00000179869.2

Hmgcs1-201, Transcript of Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgcs1, Length 3,245 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1-201ENSMUST00000179869 Atp1b4Q99ME6 356 aa12.18□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Gm13695A2AK44 830 aa12.18□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Ssh2Q5SW75 1423 aa12.18□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Wdr7Q920I9 1489 aa12.17□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Apbb1Q9QXJ1 710 aa12.17□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Cd109Q8R422 1442 aa12.17□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Supt6hQ62383 1726 aaKnown RBP12.17□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Rangap1P46061 589 aaKnown RBP12.16□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Pank3Q8R2W9 370 aa12.16□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Arhgef12Q8R4H2 1543 aaKnown RBP12.16□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Kif14L0N7N1 1674 aaKnown RBP12.16□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Cdc42bpaQ3UU96 1719 aa12.16□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Mug2P28666 1451 aa12.15□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Pik3c2gO70167 1506 aa12.15□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Kiaa1551Q5DTW7 1521 aa12.15□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Slc4a1apE9PX68 744 aa12.15□□□□□ -0.47
Hmgcs1-201ENSMUST00000179869 Fan1Q69ZT1 1020 aa12.15□□□□□ -0.47
Hmgcs1-201ENSMUST00000179869 Cwc22Q8C5N3 908 aaKnown RBP12.15□□□□□ -0.47
Hmgcs1-201ENSMUST00000179869 Clstn2Q9ER65 966 aa12.15□□□□□ -0.47
Hmgcs1-201ENSMUST00000179869 Gm20521D3Z5F7 333 aa12.13□□□□□ -0.47
Hmgcs1-201ENSMUST00000179869 Fancd2Q80V62 1450 aa12.12□□□□□ -0.47
Hmgcs1-201ENSMUST00000179869 PnisrA2AJT4 805 aaKnown RBP12.11□□□□□ -0.47
Hmgcs1-201ENSMUST00000179869 Neurod2Q62414 383 aa12.11□□□□□ -0.47
Hmgcs1-201ENSMUST00000179869 Mapkbp1Q6NS57 1503 aa12.11□□□□□ -0.47
Hmgcs1-201ENSMUST00000179869 Atp7aQ64430 1491 aa12.1□□□□□ -0.47
Hmgcs1-201ENSMUST00000179869 Myom3A2ABU4 1439 aa12.1□□□□□ -0.47
Hmgcs1-201ENSMUST00000179869 CrbnQ8C7D2 445 aa12.1□□□□□ -0.47
Hmgcs1-201ENSMUST00000179869 Atp10dQ8K2X1 1416 aa12.1□□□□□ -0.47
Hmgcs1-201ENSMUST00000179869 Cul7Q8VE73 1689 aa12.1□□□□□ -0.47
Hmgcs1-201ENSMUST00000179869 Esx1O88933 382 aa12.09□□□□□ -0.47
Hmgcs1-201ENSMUST00000179869 Mlh3A0A1Y7VMP7 1443 aa12.09□□□□□ -0.47
Hmgcs1-201ENSMUST00000179869 Rock2P70336 1388 aa12.09□□□□□ -0.47
Hmgcs1-201ENSMUST00000179869 Lemd3Q9WU40 921 aa12.09□□□□□ -0.47
Hmgcs1-201ENSMUST00000179869 Rtl5Q5DTT4 599 aa12.09□□□□□ -0.47
Hmgcs1-201ENSMUST00000179869 Stk26Q99JT2 416 aa12.09□□□□□ -0.47
Hmgcs1-201ENSMUST00000179869 L3mbtl2P59178 703 aa12.08□□□□□ -0.48
Hmgcs1-201ENSMUST00000179869 Dnajc5P60904 198 aa12.07□□□□□ -0.48
Hmgcs1-201ENSMUST00000179869 Anp32bQ9EST5 272 aaKnown RBP12.07□□□□□ -0.48
Hmgcs1-201ENSMUST00000179869 Srcin1Q9QWI6 1250 aa12.07□□□□□ -0.48
Hmgcs1-201ENSMUST00000179869 Dnmt1P13864 1620 aaKnown RBP12.07□□□□□ -0.48
Hmgcs1-201ENSMUST00000179869 Ythdc2B2RR83 1445 aaKnown RBP12.06□□□□□ -0.48
Hmgcs1-201ENSMUST00000179869 Zranb1Q7M760 708 aa12.06□□□□□ -0.48
Hmgcs1-201ENSMUST00000179869 Senp3Q9EP97 568 aaKnown RBP12.06□□□□□ -0.48
Hmgcs1-201ENSMUST00000179869 Map3k4O08648 1597 aa12.06□□□□□ -0.48
Hmgcs1-201ENSMUST00000179869 Asxl1P59598 1514 aa12.06□□□□□ -0.48
Hmgcs1-201ENSMUST00000179869 Abcc1O35379 1528 aa12.05□□□□□ -0.48
Hmgcs1-201ENSMUST00000179869 Srpk2O54781 681 aaKnown RBP12.05□□□□□ -0.48
Hmgcs1-201ENSMUST00000179869 Trim26Q99PN3 545 aa12.05□□□□□ -0.48
Hmgcs1-201ENSMUST00000179869 Polr3glQ8R0C0 218 aa12.05□□□□□ -0.48
Hmgcs1-201ENSMUST00000179869 Nlrp6Q91WS2 869 aa12.05□□□□□ -0.48
Hmgcs1-201ENSMUST00000179869 Tcerg1Q8CGF7 1100 aaKnown RBP12.05□□□□□ -0.48
Hmgcs1-201ENSMUST00000179869 Col17a1Q07563 1470 aa12.04□□□□□ -0.48
Hmgcs1-201ENSMUST00000179869 PrkcshO08795 521 aa12.04□□□□□ -0.48
Hmgcs1-201ENSMUST00000179869 Setbp1Q9Z180 1582 aa12.04□□□□□ -0.48
Hmgcs1-201ENSMUST00000179869 Pprc1Q6NZN1 1644 aa12.04□□□□□ -0.48
Hmgcs1-201ENSMUST00000179869 Dcaf11Q91VU6 549 aa12.03□□□□□ -0.48
Hmgcs1-201ENSMUST00000179869 Liat1Q810M6 228 aa12.03□□□□□ -0.48
Hmgcs1-201ENSMUST00000179869 Camsap2Q8C1B1 1461 aa12.02□□□□□ -0.48
Hmgcs1-201ENSMUST00000179869 Caskin1Q6P9K8 1431 aa12.02□□□□□ -0.49
Hmgcs1-201ENSMUST00000179869 Usp40Q8BWR4 1235 aa12.01□□□□□ -0.49
Hmgcs1-201ENSMUST00000179869 PrxO55103 1391 aa12.01□□□□□ -0.49
Hmgcs1-201ENSMUST00000179869 Zscan21Q07231 555 aa12.01□□□□□ -0.49
Hmgcs1-201ENSMUST00000179869 Zfp444Q3TDV8 331 aaKnown RBP12.01□□□□□ -0.49
Hmgcs1-201ENSMUST00000179869 Zscan10Q3URR7 782 aa12.01□□□□□ -0.49
Hmgcs1-201ENSMUST00000179869 Plekhg5Q66T02 1073 aa12.01□□□□□ -0.49
Hmgcs1-201ENSMUST00000179869 Dbr1Q923B1 550 aa12□□□□□ -0.49
Hmgcs1-201ENSMUST00000179869 NeflP08551 543 aa12□□□□□ -0.49
Hmgcs1-201ENSMUST00000179869 Fhod3Q76LL6 1578 aa12□□□□□ -0.49
Hmgcs1-201ENSMUST00000179869 Tarbp1E9Q368 1579 aa11.99□□□□□ -0.49
Hmgcs1-201ENSMUST00000179869 B4galnt3Q6L8S8 986 aa11.99□□□□□ -0.49
Hmgcs1-201ENSMUST00000179869 Naip6Q9JIB6 1403 aa11.99□□□□□ -0.49
Hmgcs1-201ENSMUST00000179869 Stag3O70576 1240 aa11.99□□□□□ -0.49
Hmgcs1-201ENSMUST00000179869 Lrrc9Q8CDN9 1456 aa11.98□□□□□ -0.49
Hmgcs1-201ENSMUST00000179869 Ppp1r18Q8BQ30 594 aa11.98□□□□□ -0.49
Hmgcs1-201ENSMUST00000179869 Gtf2e1Q9D0D5 440 aa11.98□□□□□ -0.49
Hmgcs1-201ENSMUST00000179869 Tmf1B9EKI3 1091 aa11.97□□□□□ -0.49
Hmgcs1-201ENSMUST00000179869 ArxO35085 564 aa11.97□□□□□ -0.49
Hmgcs1-201ENSMUST00000179869 AI481877A2ALV5 1481 aa11.97□□□□□ -0.49
Hmgcs1-201ENSMUST00000179869 Dot1lQ6XZL8 1540 aa11.97□□□□□ -0.49
Hmgcs1-201ENSMUST00000179869 Znf316Q6PGE4 1016 aa11.96□□□□□ -0.49
Hmgcs1-201ENSMUST00000179869 Pabpn1Q8CCS6 302 aaKnown RBP11.96□□□□□ -0.49
Hmgcs1-201ENSMUST00000179869 Polr3aB2RXC6 1390 aa11.96□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 Fam208aQ69ZR9 1610 aaKnown RBP11.96□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 PtprtQ99M80 1454 aa11.95□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 ChgaP26339 463 aaKnown RBP11.95□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 PtprgQ05909 1442 aa11.95□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 Mak16Q8BGS0 296 aaKnown RBP11.95□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 RalgapbQ8BQZ4 1484 aa11.95□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 Kif7B7ZNG0 1348 aa11.94□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 Erbb3Q61526 1339 aa11.94□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 Prdm16A2A935 1275 aa11.94□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 Egfem1Q8C088 590 aa11.94□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 Fam184bQ0KK56 942 aa11.94□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 Speer4f1Q9D5Q6 258 aa11.94□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 Ttc21bQ0HA38 1315 aa11.93□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 Armcx1Q9CX83 456 aa11.93□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 Mbd5B1AYB6 1498 aa11.93□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 4933416C03RikQ3V063 378 aa11.92□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 Ppp2r1aQ76MZ3 589 aa11.92□□□□□ -0.5
Hmgcs1-201ENSMUST00000179869 DaxxO35613 739 aa11.92□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 62.2 ms