RNA–Protein interactions for RNA: ENSMUST00000173600.1

Ltb-203, Transcript of Lymphotoxin-beta, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ltb, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ltb-203ENSMUST00000173600 Prdm16A2A935 1275 aa32.72■■■□□ 2.83
Ltb-203ENSMUST00000173600 Uggt2E9Q4X2 1504 aa32.71■■■□□ 2.83
Ltb-203ENSMUST00000173600 Plekhh2Q8C115 1491 aa32.67■■■□□ 2.82
Ltb-203ENSMUST00000173600 Topbp1Q6ZQF0 1515 aa32.67■■■□□ 2.82
Ltb-203ENSMUST00000173600 Plch2A2AP18 1501 aa32.64■■■□□ 2.82
Ltb-203ENSMUST00000173600 Bcl9Q9D219 1425 aa32.64■■■□□ 2.82
Ltb-203ENSMUST00000173600 Abca17E9PX95 1733 aa32.63■■■□□ 2.81
Ltb-203ENSMUST00000173600 Naip5Q9R016 1403 aa32.63■■■□□ 2.81
Ltb-203ENSMUST00000173600 Arhgap23Q69ZH9 1483 aa32.6■■■□□ 2.81
Ltb-203ENSMUST00000173600 Ltbp4Q8K4G1 1666 aa32.57■■■□□ 2.8
Ltb-203ENSMUST00000173600 Med14A2ABV5 1459 aaKnown RBP32.55■■■□□ 2.8
Ltb-203ENSMUST00000173600 Gm13697A2AK42 830 aa32.55■■■□□ 2.8
Ltb-203ENSMUST00000173600 3425401B19RikD3Z1D3 1412 aa32.54■■■□□ 2.8
Ltb-203ENSMUST00000173600 Cabp1Q9JLK7 227 aa32.54■■■□□ 2.8
Ltb-203ENSMUST00000173600 Spag9Q58A65 1321 aaKnown RBP32.53■■■□□ 2.8
Ltb-203ENSMUST00000173600 Rsph4aQ8BYM7 716 aa32.53■■■□□ 2.8
Ltb-203ENSMUST00000173600 Zbtb7cQ8VCZ7 619 aa32.53■■■□□ 2.8
Ltb-203ENSMUST00000173600 Usp54Q8BL06 1588 aaKnown RBP32.53■■■□□ 2.8
Ltb-203ENSMUST00000173600 Ncoa1P70365 1447 aa32.51■■■□□ 2.79
Ltb-203ENSMUST00000173600 Adgrl2Q8JZZ7 1487 aa32.49■■■□□ 2.79
Ltb-203ENSMUST00000173600 Adgrb2Q8CGM1 1561 aa32.49■■■□□ 2.79
Ltb-203ENSMUST00000173600 Chic2Q9D9G3 165 aa32.46■■■□□ 2.79
Ltb-203ENSMUST00000173600 Ssh2Q5SW75 1423 aa32.44■■■□□ 2.78
Ltb-203ENSMUST00000173600 Phlpp1Q8CHE4 1687 aa32.43■■■□□ 2.78
Ltb-203ENSMUST00000173600 Abcc6Q9R1S7 1498 aa32.42■■■□□ 2.78
Ltb-203ENSMUST00000173600 Rimbp3Q3V0F0 1606 aa32.41■■■□□ 2.78
Ltb-203ENSMUST00000173600 Hspa1lP16627 641 aa32.4■■■□□ 2.78
Ltb-203ENSMUST00000173600 Il16O54824 1322 aa32.4■■■□□ 2.78
Ltb-203ENSMUST00000173600 Myo5cE9Q1F5 1742 aa32.39■■■□□ 2.78
Ltb-203ENSMUST00000173600 ShprhQ7TPQ3 1674 aa32.37■■■□□ 2.77
Ltb-203ENSMUST00000173600 Kdm3bQ6ZPY7 1562 aa32.37■■■□□ 2.77
Ltb-203ENSMUST00000173600 Prex1Q69ZK0 1650 aa32.37■■■□□ 2.77
Ltb-203ENSMUST00000173600 GphnQ8BUV3 769 aaKnown RBP32.36■■■□□ 2.77
Ltb-203ENSMUST00000173600 Hfm1D3Z4R1 1434 aa32.34■■■□□ 2.77
Ltb-203ENSMUST00000173600 Vps8Q0P5W1 1427 aa32.34■■■□□ 2.77
Ltb-203ENSMUST00000173600 Iqsec2Q5DU25 1478 aa32.3■■■□□ 2.76
Ltb-203ENSMUST00000173600 Scaf11E9PZM7 1456 aaKnown RBP32.29■■■□□ 2.76
Ltb-203ENSMUST00000173600 Hnrnpul2Q00PI9 745 aaKnown RBP32.29■■■□□ 2.76
Ltb-203ENSMUST00000173600 Robo2Q7TPD3 1470 aa32.28■■■□□ 2.76
Ltb-203ENSMUST00000173600 Kif1bQ60575 1816 aaKnown RBP32.28■■■□□ 2.76
Ltb-203ENSMUST00000173600 Adamts7Q68SA9 1657 aa32.27■■■□□ 2.76
Ltb-203ENSMUST00000173600 Rims2Q9EQZ7 1530 aa32.25■■■□□ 2.75
Ltb-203ENSMUST00000173600 AlkP97793 1621 aa32.23■■■□□ 2.75
Ltb-203ENSMUST00000173600 Gli3Q61602 1583 aa32.23■■■□□ 2.75
Ltb-203ENSMUST00000173600 Pde4cQ3UEI1 686 aa32.2■■■□□ 2.75
Ltb-203ENSMUST00000173600 Kif7B7ZNG0 1348 aa32.2■■■□□ 2.74
Ltb-203ENSMUST00000173600 DroshaQ5HZJ0 1373 aaKnown RBP32.19■■■□□ 2.74
Ltb-203ENSMUST00000173600 Chd2E9PZM4 1827 aaKnown RBP32.19■■■□□ 2.74
Ltb-203ENSMUST00000173600 Akap12Q9WTQ5 1684 aa32.16■■■□□ 2.74
Ltb-203ENSMUST00000173600 Adgrb3Q80ZF8 1522 aa32.13■■■□□ 2.73
Ltb-203ENSMUST00000173600 Rapgef3Q8VCC8 918 aa32.11■■■□□ 2.73
Ltb-203ENSMUST00000173600 Asxl1P59598 1514 aa32.07■■■□□ 2.72
Ltb-203ENSMUST00000173600 Fam50aQ9WV03 339 aaKnown RBP32.06■■■□□ 2.72
Ltb-203ENSMUST00000173600 Arid4bA2CG63 1314 aaKnown RBP32.05■■■□□ 2.72
Ltb-203ENSMUST00000173600 Fhad1A6PWD2 1420 aa32.04■■■□□ 2.72
Ltb-203ENSMUST00000173600 NclP09405 707 aaKnown RBP32.03■■■□□ 2.72
Ltb-203ENSMUST00000173600 Bcl11bQ99PV8 884 aa32.03■■■□□ 2.72
Ltb-203ENSMUST00000173600 Tmem131lQ3U3D7 1597 aa32.02■■■□□ 2.72
Ltb-203ENSMUST00000173600 UacaQ8CGB3 1411 aa32.02■■■□□ 2.72
Ltb-203ENSMUST00000173600 Gemin5Q8BX17 1502 aaKnown RBP32.02■■■□□ 2.72
Ltb-203ENSMUST00000173600 Kdm5aQ3UXZ9 1690 aa32■■■□□ 2.71
Ltb-203ENSMUST00000173600 Iqgap1Q9JKF1 1657 aaKnown RBP32■■■□□ 2.71
Ltb-203ENSMUST00000173600 Kif13aQ9EQW7 1749 aa31.99■■■□□ 2.71
Ltb-203ENSMUST00000173600 Ttc21bQ0HA38 1315 aa31.97■■■□□ 2.71
Ltb-203ENSMUST00000173600 Rfx7F8VPJ6 1459 aa31.97■■■□□ 2.71
Ltb-203ENSMUST00000173600 PzpQ61838 1495 aa31.97■■■□□ 2.71
Ltb-203ENSMUST00000173600 Lamc1P02468 1607 aaKnown RBP31.96■■■□□ 2.71
Ltb-203ENSMUST00000173600 Nrxn3Q6P9K9 1571 aa31.94■■■□□ 2.7
Ltb-203ENSMUST00000173600 Tubgcp6G5E8P0 1769 aa31.94■■■□□ 2.7
Ltb-203ENSMUST00000173600 AnkarA2RT91 1465 aa31.93■■■□□ 2.7
Ltb-203ENSMUST00000173600 Itsn1Q9Z0R4 1714 aa31.93■■■□□ 2.7
Ltb-203ENSMUST00000173600 Map4P27546 1125 aaKnown RBP31.93■■■□□ 2.7
Ltb-203ENSMUST00000173600 Zfp644E9QA22 1323 aa31.93■■■□□ 2.7
Ltb-203ENSMUST00000173600 Nup155Q99P88 1391 aaKnown RBP31.93■■■□□ 2.7
Ltb-203ENSMUST00000173600 Skint5A7XUY5 1461 aa31.9■■■□□ 2.7
Ltb-203ENSMUST00000173600 Zc3h13E9Q784 1729 aaKnown RBP31.89■■■□□ 2.7
Ltb-203ENSMUST00000173600 UbtfP25976 765 aaKnown RBP31.89■■■□□ 2.7
Ltb-203ENSMUST00000173600 Ylpm1Q9R0I7 1386 aaKnown RBP31.87■■■□□ 2.69
Ltb-203ENSMUST00000173600 Ino80Q6ZPV2 1559 aa31.86■■■□□ 2.69
Ltb-203ENSMUST00000173600 Clstn2Q9ER65 966 aa31.86■■■□□ 2.69
Ltb-203ENSMUST00000173600 Prdm2A2A7B5 1709 aaKnown RBP31.85■■■□□ 2.69
Ltb-203ENSMUST00000173600 Fbln2P37889 1221 aa31.83■■■□□ 2.69
Ltb-203ENSMUST00000173600 Txndc2Q6P902 515 aa31.83■■■□□ 2.69
Ltb-203ENSMUST00000173600 Myom3A2ABU4 1439 aa31.82■■■□□ 2.68
Ltb-203ENSMUST00000173600 Eif2ak4Q9QZ05 1648 aa31.81■■■□□ 2.68
Ltb-203ENSMUST00000173600 Naip7Q9JIB3 1402 aa31.8■■■□□ 2.68
Ltb-203ENSMUST00000173600 Med1Q925J9 1575 aa31.79■■■□□ 2.68
Ltb-203ENSMUST00000173600 Nsd2Q8BVE8 1365 aa31.76■■■□□ 2.67
Ltb-203ENSMUST00000173600 Efcab6Q6P1E8 1516 aa31.74■■■□□ 2.67
Ltb-203ENSMUST00000173600 Erich6D3Z6S9 713 aa31.73■■■□□ 2.67
Ltb-203ENSMUST00000173600 Cd109Q8R422 1442 aa31.72■■■□□ 2.67
Ltb-203ENSMUST00000173600 Ttll5Q8CHB8 1328 aa31.72■■■□□ 2.67
Ltb-203ENSMUST00000173600 Setd1aE9PYH6 1716 aa31.72■■■□□ 2.67
Ltb-203ENSMUST00000173600 Iqgap3F8VQ29 1632 aa31.71■■■□□ 2.67
Ltb-203ENSMUST00000173600 Myo3aQ8K3H5 1613 aa31.69■■■□□ 2.66
Ltb-203ENSMUST00000173600 P3h3Q8CG70 732 aa31.69■■■□□ 2.66
Ltb-203ENSMUST00000173600 Tecpr2Q3UH45 1423 aa31.66■■■□□ 2.66
Ltb-203ENSMUST00000173600 Gm13695A2AK44 830 aa31.66■■■□□ 2.66
Ltb-203ENSMUST00000173600 Ube2uB1AUC4 352 aa31.66■■■□□ 2.66
Ltb-203ENSMUST00000173600 Tarbp1E9Q368 1579 aa31.64■■■□□ 2.65
Retrieved 100 of 22,080 RNA–protein pairs in 119.9 ms