RNA–Protein interactions for RNA: ENSMUST00000165860.7

Ubr4-212, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

TSL 5 BASIC

Gene Ubr4, Length 15,798 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-212ENSMUST00000165860 Gps2Q921N8 327 aa7.54□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Lekr1B2RVN1 116 aa7.54□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Arid3aQ62431 601 aa7.54□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Fam107bQ3TGF2 131 aa7.54□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Rfx1P48377 963 aa7.54□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Chmp4bQ9D8B3 224 aaKnown RBP7.53□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Eea1Q8BL66 1411 aa7.53□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Prkrip1Q9CWV6 186 aaKnown RBP7.53□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Samd1D3YXK1 519 aa7.53□□□□□ -1.2
Ubr4-212ENSMUST00000165860 EzrP26040 586 aaKnown RBP7.53□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Ftsj3Q9DBE9 838 aaKnown RBP7.53□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Ralbp1Q62172 648 aa7.52□□□□□ -1.2
Ubr4-212ENSMUST00000165860 ScaperF8VQ70 1398 aaKnown RBP7.52□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Pnmal2G3X9N3 661 aa7.52□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Ccdc34Q3UI66 367 aa7.52□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Def6Q8C2K1 630 aa7.52□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Mterf4Q8BVN4 346 aa7.52□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Dhx8A2A4P0 1244 aaKnown RBP7.51□□□□□ -1.21
Ubr4-212ENSMUST00000165860 MccE9PWI3 1003 aa7.51□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Rundc1Q0VDN7 615 aa7.51□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Dnajc2P54103 621 aaKnown RBP7.51□□□□□ -1.21
Ubr4-212ENSMUST00000165860 CrbnQ8C7D2 445 aa7.51□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Tomm22Q9CPQ3 142 aa7.5□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Kcnh8P59111 1102 aa7.5□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Ccdc183A2AJB1 534 aa7.5□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Gripap1Q8VD04 806 aa7.49□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Aebp1Q640N1 1128 aa7.49□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Golga3P55937 1487 aa7.49□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Casq1O09165 405 aa7.49□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Liat1Q810M6 228 aa7.49□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Sh3bp5Q9Z131 463 aa7.49□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Mroh3A0A1D5RM54 893 aa7.49□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Scaf1Q5U4C3 1256 aaKnown RBP7.49□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Rsph10bE9PYQ0 876 aa7.49□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Itgb1bp2Q9R000 350 aa7.48□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Prm3Q62100 101 aa7.48□□□□□ -1.21
Ubr4-212ENSMUST00000165860 HomezQ80W88 542 aa7.48□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Clstn2Q9ER65 966 aa7.48□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Tpd52l1O54818 204 aa7.48□□□□□ -1.21
Ubr4-212ENSMUST00000165860 CgnP59242 1191 aa7.48□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Cbx1P83917 185 aaKnown RBP7.48□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Fam193aQ8CGI1 1231 aaKnown RBP7.48□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Ccdc94Q9D6J3 314 aa7.48□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Ylpm1Q9R0I7 1386 aaKnown RBP7.47□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Plcd3Q8K2J0 785 aa7.47□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Cdkn1cP49919 348 aa7.47□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Suds3Q8BR65 328 aa7.47□□□□□ -1.21
Ubr4-212ENSMUST00000165860 HnrnpuQ8VEK3 800 aaKnown RBP7.46□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Slc4a2P13808 1237 aaKnown RBP7.46□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Tnpo1Q8BFY9 898 aaKnown RBP7.46□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Sf3a1Q8K4Z5 791 aaKnown RBP7.46□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Zhx1P70121 873 aa7.46□□□□□ -1.21
Ubr4-212ENSMUST00000165860 Ercc3P49135 783 aa7.46□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Pkd2O35245 966 aa7.46□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Arhgap27A2AB59 869 aa7.46□□□□□ -1.22
Ubr4-212ENSMUST00000165860 NmiO35309 314 aa7.46□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Kdm2aP59997 1161 aa7.46□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Rnf214Q8BFU3 668 aaKnown RBP7.46□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Utp3Q9JI13 469 aaKnown RBP7.46□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Baz1bQ9Z277 1479 aa7.45□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Clcn1Q64347 994 aa7.45□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Ccdc83Q9D4V3 305 aa7.45□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Kif4P33174 1231 aa7.45□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Dixdc1Q80Y83 711 aa7.45□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Ubap1lG3UW59 384 aa7.45□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Ppm1eQ80TL0 749 aa7.45□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Golga2Q921M4 999 aa7.44□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Ssh1Q76I79 1042 aa7.44□□□□□ -1.22
Ubr4-212ENSMUST00000165860 KarsQ99MN1 595 aaKnown RBP7.44□□□□□ -1.22
Ubr4-212ENSMUST00000165860 AdnpQ9Z103 1108 aaKnown RBP7.44□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Gm35339A0A140LHH9 1649 aa7.44□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Atp6v1dP57746 247 aa7.44□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Znf330Q922H9 316 aa7.44□□□□□ -1.22
Ubr4-212ENSMUST00000165860 PogkQ80TC5 607 aa7.44□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Ccnb3Q810T2 1396 aa7.44□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Stk11ipQ3TAA7 1072 aa7.43□□□□□ -1.22
Ubr4-212ENSMUST00000165860 PdiltQ9DAN1 588 aa7.43□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Kif16bB1AVY7 1312 aa7.43□□□□□ -1.22
Ubr4-212ENSMUST00000165860 PnisrA2AJT4 805 aaKnown RBP7.43□□□□□ -1.22
Ubr4-212ENSMUST00000165860 St18Q80TY4 1045 aa7.42□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Znf526Q8BI66 675 aa7.42□□□□□ -1.22
Ubr4-212ENSMUST00000165860 1700122O11RikJ3QPW6 241 aa7.42□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Mcm4P49717 862 aa7.42□□□□□ -1.22
Ubr4-212ENSMUST00000165860 CrebrfQ8CDG5 640 aaKnown RBP7.42□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Smarce1O54941 411 aaKnown RBP7.42□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Tpm1P58771 284 aa7.42□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Noc3lQ8VI84 807 aaKnown RBP7.42□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Polr3gQ6NXY9 223 aa7.42□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Mphosph9A6H5Y1 991 aa7.42□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Kif2aP28740 705 aa7.42□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Usp35M0QWN7 1009 aa7.42□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Tmf1B9EKI3 1091 aa7.42□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Iqca1Q9CUL5 857 aa7.42□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Ccdc88bQ4QRL3 1481 aa7.42□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Cnga1P29974 684 aa7.42□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Kiaa1211Q5PR69 1207 aa7.42□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Znf653Q6YND2 615 aa7.41□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Tmco5bQ80X59 307 aa7.41□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Mnat1P51949 309 aa7.41□□□□□ -1.22
Ubr4-212ENSMUST00000165860 OptnQ8K3K8 584 aa7.41□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms