RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Stk11ipQ3TAA7 1072 aa14.65□□□□□ -0.07
Ndc1-204ENSMUST00000139560 Q7TT23 1179 aa14.64□□□□□ -0.07
Ndc1-204ENSMUST00000139560 Rtf1A2AQ19 715 aaKnown RBP14.64□□□□□ -0.07
Ndc1-204ENSMUST00000139560 Cc2d1aQ8K1A6 943 aa14.63□□□□□ -0.07
Ndc1-204ENSMUST00000139560 Rock2P70336 1388 aa14.63□□□□□ -0.07
Ndc1-204ENSMUST00000139560 Znf326O88291 580 aa14.63□□□□□ -0.07
Ndc1-204ENSMUST00000139560 Kiaa0754Q69ZZ9 979 aa14.63□□□□□ -0.07
Ndc1-204ENSMUST00000139560 Crybg2B7ZCC2 1516 aa14.62□□□□□ -0.07
Ndc1-204ENSMUST00000139560 Zfp644E9QA22 1323 aa14.62□□□□□ -0.07
Ndc1-204ENSMUST00000139560 Rassf8Q8CJ96 419 aa14.62□□□□□ -0.07
Ndc1-204ENSMUST00000139560 Sh3bp5Q9Z131 463 aa14.62□□□□□ -0.07
Ndc1-204ENSMUST00000139560 Utp14aQ640M1 767 aaKnown RBP14.62□□□□□ -0.07
Ndc1-204ENSMUST00000139560 Pank1Q8K4K6 548 aa14.62□□□□□ -0.07
Ndc1-204ENSMUST00000139560 Dhx29Q6PGC1 1365 aaKnown RBP14.62□□□□□ -0.07
Ndc1-204ENSMUST00000139560 Mre11Q61216 706 aa14.61□□□□□ -0.07
Ndc1-204ENSMUST00000139560 Mical1Q8VDP3 1048 aa14.61□□□□□ -0.07
Ndc1-204ENSMUST00000139560 Atad2bE9Q166 1460 aaKnown RBP14.6□□□□□ -0.07
Ndc1-204ENSMUST00000139560 Chmp4bQ9D8B3 224 aaKnown RBP14.59□□□□□ -0.07
Ndc1-204ENSMUST00000139560 VgfQ0VGU4 617 aa14.59□□□□□ -0.07
Ndc1-204ENSMUST00000139560 Plekhh2Q8C115 1491 aa14.59□□□□□ -0.07
Ndc1-204ENSMUST00000139560 Ggt6Q6PDE7 497 aa14.59□□□□□ -0.07
Ndc1-204ENSMUST00000139560 WrnO09053 1401 aa14.58□□□□□ -0.07
Ndc1-204ENSMUST00000139560 Q3TQI7 289 aaKnown RBP14.58□□□□□ -0.07
Ndc1-204ENSMUST00000139560 PnnO35691 725 aaKnown RBP14.58□□□□□ -0.08
Ndc1-204ENSMUST00000139560 Ccdc60Q8C4J0 545 aa14.58□□□□□ -0.08
Ndc1-204ENSMUST00000139560 Nutm1Q8BHP2 1126 aa14.57□□□□□ -0.08
Ndc1-204ENSMUST00000139560 Fbxo2Q80UW2 297 aa14.57□□□□□ -0.08
Ndc1-204ENSMUST00000139560 Zfp777B9EKF4 885 aa14.57□□□□□ -0.08
Ndc1-204ENSMUST00000139560 MccE9PWI3 1003 aa14.56□□□□□ -0.08
Ndc1-204ENSMUST00000139560 Nol12Q8BG17 217 aa14.56□□□□□ -0.08
Ndc1-204ENSMUST00000139560 Tsen2Q6P7W5 460 aa14.55□□□□□ -0.08
Ndc1-204ENSMUST00000139560 Tdrd9Q14BI7 1383 aa14.55□□□□□ -0.08
Ndc1-204ENSMUST00000139560 Brpf1B2RRD7 1212 aa14.54□□□□□ -0.08
Ndc1-204ENSMUST00000139560 Q8BT18 775 aa14.54□□□□□ -0.08
Ndc1-204ENSMUST00000139560 Iffo2Q8R2V2 512 aa14.54□□□□□ -0.08
Ndc1-204ENSMUST00000139560 BicraF8VPZ9 1578 aa14.54□□□□□ -0.08
Ndc1-204ENSMUST00000139560 Rnf214Q8BFU3 668 aaKnown RBP14.54□□□□□ -0.08
Ndc1-204ENSMUST00000139560 Tomm22Q9CPQ3 142 aa14.54□□□□□ -0.08
Ndc1-204ENSMUST00000139560 HnrnpuQ8VEK3 800 aaKnown RBP14.54□□□□□ -0.08
Ndc1-204ENSMUST00000139560 Nectin2P32507 530 aa14.53□□□□□ -0.08
Ndc1-204ENSMUST00000139560 Ddrgk1Q80WW9 315 aa14.53□□□□□ -0.08
Ndc1-204ENSMUST00000139560 Dhx57Q6P5D3 1388 aaKnown RBP14.53□□□□□ -0.08
Ndc1-204ENSMUST00000139560 Anapc15P60007 132 aa14.53□□□□□ -0.08
Ndc1-204ENSMUST00000139560 Zfp444Q3TDV8 331 aaKnown RBP14.53□□□□□ -0.08
Ndc1-204ENSMUST00000139560 Polr3gQ6NXY9 223 aa14.52□□□□□ -0.09
Ndc1-204ENSMUST00000139560 Ccar1Q8CH18 1146 aaKnown RBP14.51□□□□□ -0.09
Ndc1-204ENSMUST00000139560 Rock1P70335 1354 aa14.51□□□□□ -0.09
Ndc1-204ENSMUST00000139560 Trim30aP15533 496 aa14.51□□□□□ -0.09
Ndc1-204ENSMUST00000139560 Ccdc183A2AJB1 534 aa14.51□□□□□ -0.09
Ndc1-204ENSMUST00000139560 Becn1O88597 448 aa14.5□□□□□ -0.09
Ndc1-204ENSMUST00000139560 Rsph3aQ3UFY4 516 aa14.5□□□□□ -0.09
Ndc1-204ENSMUST00000139560 Adam1bQ8R534 806 aa14.5□□□□□ -0.09
Ndc1-204ENSMUST00000139560 Rbm10Q99KG3 930 aaKnown RBP14.5□□□□□ -0.09
Ndc1-204ENSMUST00000139560 Tnpo1Q8BFY9 898 aaKnown RBP14.49□□□□□ -0.09
Ndc1-204ENSMUST00000139560 Ccdc30Q8BVF4 654 aa14.49□□□□□ -0.09
Ndc1-204ENSMUST00000139560 Kif7B7ZNG0 1348 aa14.49□□□□□ -0.09
Ndc1-204ENSMUST00000139560 Dapk1Q80YE7 1442 aa14.49□□□□□ -0.09
Ndc1-204ENSMUST00000139560 Washc2Q6PGL7 1334 aa14.49□□□□□ -0.09
Ndc1-204ENSMUST00000139560 Spag9Q58A65 1321 aaKnown RBP14.49□□□□□ -0.09
Ndc1-204ENSMUST00000139560 MecomP14404 1042 aa14.49□□□□□ -0.09
Ndc1-204ENSMUST00000139560 Shq1Q7TMX5 569 aa14.48□□□□□ -0.09
Ndc1-204ENSMUST00000139560 Zscan10Q3URR7 782 aa14.48□□□□□ -0.09
Ndc1-204ENSMUST00000139560 Jph4Q80WT0 628 aa14.48□□□□□ -0.09
Ndc1-204ENSMUST00000139560 Ush1cQ9ES64 910 aa14.48□□□□□ -0.09
Ndc1-204ENSMUST00000139560 Mink1Q9JM52 1308 aa14.48□□□□□ -0.09
Ndc1-204ENSMUST00000139560 Usp40Q8BWR4 1235 aa14.48□□□□□ -0.09
Ndc1-204ENSMUST00000139560 Prkrip1Q9CWV6 186 aaKnown RBP14.48□□□□□ -0.09
Ndc1-204ENSMUST00000139560 Ylpm1Q9R0I7 1386 aaKnown RBP14.47□□□□□ -0.09
Ndc1-204ENSMUST00000139560 Phactr2B1AVP0 632 aa14.47□□□□□ -0.09
Ndc1-204ENSMUST00000139560 L3mbtl2P59178 703 aa14.46□□□□□ -0.09
Ndc1-204ENSMUST00000139560 Cabp4Q8VHC5 271 aa14.46□□□□□ -0.09
Ndc1-204ENSMUST00000139560 PnisrA2AJT4 805 aaKnown RBP14.45□□□□□ -0.1
Ndc1-204ENSMUST00000139560 Smarca4Q3TKT4 1613 aaKnown RBP14.44□□□□□ -0.1
Ndc1-204ENSMUST00000139560 Fam184bQ0KK56 942 aa14.44□□□□□ -0.1
Ndc1-204ENSMUST00000139560 Utp3Q9JI13 469 aaKnown RBP14.44□□□□□ -0.1
Ndc1-204ENSMUST00000139560 Triml2E9PW10 424 aa14.44□□□□□ -0.1
Ndc1-204ENSMUST00000139560 Pdcl3Q8BVF2 240 aa14.44□□□□□ -0.1
Ndc1-204ENSMUST00000139560 UacaQ8CGB3 1411 aa14.44□□□□□ -0.1
Ndc1-204ENSMUST00000139560 Ipo4Q8VI75 1082 aa14.43□□□□□ -0.1
Ndc1-204ENSMUST00000139560 G3bp1P97855 465 aaKnown RBP14.42□□□□□ -0.1
Ndc1-204ENSMUST00000139560 Q4VA45 678 aa14.42□□□□□ -0.1
Ndc1-204ENSMUST00000139560 CenpjQ569L8 1344 aa14.42□□□□□ -0.1
Ndc1-204ENSMUST00000139560 Slc4a10Q5DTL9 1118 aa14.42□□□□□ -0.1
Ndc1-204ENSMUST00000139560 Sf3a1Q8K4Z5 791 aaKnown RBP14.42□□□□□ -0.1
Ndc1-204ENSMUST00000139560 GsdmaQ9EST1 446 aa14.42□□□□□ -0.1
Ndc1-204ENSMUST00000139560 Soga1E1U8D0 1418 aa14.41□□□□□ -0.1
Ndc1-204ENSMUST00000139560 PogkQ80TC5 607 aa14.41□□□□□ -0.1
Ndc1-204ENSMUST00000139560 Cc2d2bA0A286YDU8 1405 aa14.41□□□□□ -0.1
Ndc1-204ENSMUST00000139560 Casq1O09165 405 aa14.41□□□□□ -0.1
Ndc1-204ENSMUST00000139560 Ap3b2Q9JME5 1082 aa14.41□□□□□ -0.1
Ndc1-204ENSMUST00000139560 Pabpn1Q8CCS6 302 aaKnown RBP14.41□□□□□ -0.1
Ndc1-204ENSMUST00000139560 Rabep1O35551 862 aa14.4□□□□□ -0.1
Ndc1-204ENSMUST00000139560 Trim58Q5NCC9 485 aa14.4□□□□□ -0.1
Ndc1-204ENSMUST00000139560 Gm973E9Q295 1059 aa14.4□□□□□ -0.1
Ndc1-204ENSMUST00000139560 Apaf1O88879 1249 aa14.4□□□□□ -0.1
Ndc1-204ENSMUST00000139560 Babam1Q3UI43 333 aa14.4□□□□□ -0.1
Ndc1-204ENSMUST00000139560 Chmp3Q9CQ10 224 aa14.4□□□□□ -0.1
Ndc1-204ENSMUST00000139560 RdxP26043 583 aaKnown RBP14.39□□□□□ -0.11
Ndc1-204ENSMUST00000139560 Paxip1Q6NZQ4 1056 aa14.39□□□□□ -0.11
Ndc1-204ENSMUST00000139560 PtmsQ9D0J8 101 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms