RNA–Protein interactions for RNA: ENSMUST00000129269.7

Stag1-206, Transcript of Cohesin subunit SA-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Stag1, Length 6,186 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1-206ENSMUST00000129269 Q9D9H8 365 aa17.6■□□□□ 0.41
Stag1-206ENSMUST00000129269 KnstrnQ9D9Z1 312 aaKnown RBP17.59■□□□□ 0.41
Stag1-206ENSMUST00000129269 Slc4a10Q5DTL9 1118 aa17.59■□□□□ 0.41
Stag1-206ENSMUST00000129269 Iqgap2Q3UQ44 1575 aa17.59■□□□□ 0.41
Stag1-206ENSMUST00000129269 Dmrt2Q8BG36 561 aa17.58■□□□□ 0.41
Stag1-206ENSMUST00000129269 AppP12023 770 aa17.58■□□□□ 0.4
Stag1-206ENSMUST00000129269 Dnai2A2AC93 623 aa17.58■□□□□ 0.4
Stag1-206ENSMUST00000129269 Ppm1gQ61074 542 aa17.57■□□□□ 0.4
Stag1-206ENSMUST00000129269 Zpr1Q62384 459 aa17.57■□□□□ 0.4
Stag1-206ENSMUST00000129269 Klf15Q9EPW2 415 aa17.57■□□□□ 0.4
Stag1-206ENSMUST00000129269 Iffo2Q8R2V2 512 aa17.57■□□□□ 0.4
Stag1-206ENSMUST00000129269 Trim44Q9QXA7 346 aa17.57■□□□□ 0.4
Stag1-206ENSMUST00000129269 Rad54l2Q99NG0 1466 aa17.56■□□□□ 0.4
Stag1-206ENSMUST00000129269 Zscan21Q07231 555 aa17.56■□□□□ 0.4
Stag1-206ENSMUST00000129269 Ncoa2Q61026 1462 aa17.55■□□□□ 0.4
Stag1-206ENSMUST00000129269 Slc4a3P16283 1227 aa17.55■□□□□ 0.4
Stag1-206ENSMUST00000129269 Afap1Q80YS6 731 aa17.55■□□□□ 0.4
Stag1-206ENSMUST00000129269 Vps53Q8CCB4 832 aa17.55■□□□□ 0.4
Stag1-206ENSMUST00000129269 Eva1cP58659 440 aa17.54■□□□□ 0.4
Stag1-206ENSMUST00000129269 Ccdc27Q3V036 639 aa17.54■□□□□ 0.4
Stag1-206ENSMUST00000129269 Isy1Q69ZQ2 285 aaKnown RBP17.53■□□□□ 0.4
Stag1-206ENSMUST00000129269 Ccar1Q8CH18 1146 aaKnown RBP17.53■□□□□ 0.4
Stag1-206ENSMUST00000129269 ErbinQ80TH2 1402 aa17.53■□□□□ 0.4
Stag1-206ENSMUST00000129269 Casc1Q6TDU8 730 aa17.53■□□□□ 0.4
Stag1-206ENSMUST00000129269 Stard8Q8K031 1019 aa17.53■□□□□ 0.4
Stag1-206ENSMUST00000129269 Pank3Q8R2W9 370 aa17.53■□□□□ 0.4
Stag1-206ENSMUST00000129269 Dhx16G3X8X0 1044 aaKnown RBP17.52■□□□□ 0.39
Stag1-206ENSMUST00000129269 Bcl11aQ9QYE3 773 aa17.51■□□□□ 0.39
Stag1-206ENSMUST00000129269 Gm10471E9Q1C7 252 aa17.5■□□□□ 0.39
Stag1-206ENSMUST00000129269 Spryd3E9Q9B3 442 aa17.5■□□□□ 0.39
Stag1-206ENSMUST00000129269 Cc2d1aQ8K1A6 943 aa17.5■□□□□ 0.39
Stag1-206ENSMUST00000129269 Map3k5O35099 1380 aa17.5■□□□□ 0.39
Stag1-206ENSMUST00000129269 TatQ8QZR1 454 aa17.49■□□□□ 0.39
Stag1-206ENSMUST00000129269 BcanQ61361 883 aa17.49■□□□□ 0.39
Stag1-206ENSMUST00000129269 Ttll5Q8CHB8 1328 aa17.48■□□□□ 0.39
Stag1-206ENSMUST00000129269 Bcl2l13P59017 434 aa17.48■□□□□ 0.39
Stag1-206ENSMUST00000129269 Zranb3Q6NZP1 1069 aa17.47■□□□□ 0.39
Stag1-206ENSMUST00000129269 ScribQ80U72 1612 aa17.47■□□□□ 0.39
Stag1-206ENSMUST00000129269 Mak16Q8BGS0 296 aaKnown RBP17.46■□□□□ 0.39
Stag1-206ENSMUST00000129269 Sytl4Q9R0Q1 673 aa17.46■□□□□ 0.39
Stag1-206ENSMUST00000129269 Pde3bQ61409 1100 aa17.46■□□□□ 0.39
Stag1-206ENSMUST00000129269 Inpp5dQ9ES52 1191 aa17.46■□□□□ 0.39
Stag1-206ENSMUST00000129269 Rbm5Q91YE7 815 aaKnown RBP17.46■□□□□ 0.39
Stag1-206ENSMUST00000129269 Cttnbp2B9EJA2 1648 aa17.45■□□□□ 0.38
Stag1-206ENSMUST00000129269 Pcmtd1P59913 357 aa17.45■□□□□ 0.38
Stag1-206ENSMUST00000129269 Usp47Q8BY87 1376 aa17.45■□□□□ 0.38
Stag1-206ENSMUST00000129269 CgnP59242 1191 aa17.45■□□□□ 0.38
Stag1-206ENSMUST00000129269 Kcnn1Q9EQR3 537 aa17.44■□□□□ 0.38
Stag1-206ENSMUST00000129269 Smc4Q8CG47 1286 aa17.44■□□□□ 0.38
Stag1-206ENSMUST00000129269 Atp2b2Q9R0K7 1198 aa17.44■□□□□ 0.38
Stag1-206ENSMUST00000129269 Gsto1O09131 240 aa17.43■□□□□ 0.38
Stag1-206ENSMUST00000129269 UacaQ8CGB3 1411 aa17.43■□□□□ 0.38
Stag1-206ENSMUST00000129269 Arhgap5P97393 1501 aa17.42■□□□□ 0.38
Stag1-206ENSMUST00000129269 Mical1Q8VDP3 1048 aa17.42■□□□□ 0.38
Stag1-206ENSMUST00000129269 Fgd6Q69ZL1 1399 aa17.42■□□□□ 0.38
Stag1-206ENSMUST00000129269 Pde4cQ3UEI1 686 aa17.42■□□□□ 0.38
Stag1-206ENSMUST00000129269 GorabQ8BRM2 368 aa17.42■□□□□ 0.38
Stag1-206ENSMUST00000129269 Smarca2Q6DIC0 1577 aa17.41■□□□□ 0.38
Stag1-206ENSMUST00000129269 Crybg2B7ZCC2 1516 aa17.41■□□□□ 0.38
Stag1-206ENSMUST00000129269 Kif7B7ZNG0 1348 aa17.4■□□□□ 0.38
Stag1-206ENSMUST00000129269 Gm21698A0A087WQP8 267 aa17.4■□□□□ 0.38
Stag1-206ENSMUST00000129269 Gm21671G3UY31 267 aa17.4■□□□□ 0.38
Stag1-206ENSMUST00000129269 CrebrfQ8CDG5 640 aaKnown RBP17.4■□□□□ 0.38
Stag1-206ENSMUST00000129269 Ccdc60Q8C4J0 545 aa17.4■□□□□ 0.38
Stag1-206ENSMUST00000129269 Mrc2Q64449 1479 aa17.39■□□□□ 0.37
Stag1-206ENSMUST00000129269 Ccdc146E9Q9F7 977 aa17.38■□□□□ 0.37
Stag1-206ENSMUST00000129269 Smg7Q5RJH6 1138 aaKnown RBP17.37■□□□□ 0.37
Stag1-206ENSMUST00000129269 Chmp5Q9D7S9 219 aa17.37■□□□□ 0.37
Stag1-206ENSMUST00000129269 GsdmaQ9EST1 446 aa17.37■□□□□ 0.37
Stag1-206ENSMUST00000129269 Puf60Q3UEB3 564 aaKnown RBP17.36■□□□□ 0.37
Stag1-206ENSMUST00000129269 Rab11fip3Q8CHD8 1047 aa17.36■□□□□ 0.37
Stag1-206ENSMUST00000129269 ArsiQ32KI9 573 aa17.36■□□□□ 0.37
Stag1-206ENSMUST00000129269 Mfap1aC0HKD8 439 aaKnown RBP17.35■□□□□ 0.37
Stag1-206ENSMUST00000129269 Mfap1bC0HKD9 439 aaKnown RBP17.35■□□□□ 0.37
Stag1-206ENSMUST00000129269 Htatsf1Q8BGC0 757 aa17.35■□□□□ 0.37
Stag1-206ENSMUST00000129269 Arhgap31A6X8Z5 1425 aa17.35■□□□□ 0.37
Stag1-206ENSMUST00000129269 Fam184bQ0KK56 942 aa17.35■□□□□ 0.37
Stag1-206ENSMUST00000129269 Eif2s2Q99L45 331 aaKnown RBP17.34■□□□□ 0.37
Stag1-206ENSMUST00000129269 Mbd3Q9Z2D8 285 aaKnown RBP17.34■□□□□ 0.37
Stag1-206ENSMUST00000129269 Gsdma3Q5Y4Y6 464 aa17.34■□□□□ 0.37
Stag1-206ENSMUST00000129269 Neurod6P48986 337 aa17.33■□□□□ 0.36
Stag1-206ENSMUST00000129269 Tpm3-rs7D3Z2H9 248 aa17.31■□□□□ 0.36
Stag1-206ENSMUST00000129269 Supt16hQ920B9 1047 aa17.31■□□□□ 0.36
Stag1-206ENSMUST00000129269 Gm14025A2AP89 1413 aa17.31■□□□□ 0.36
Stag1-206ENSMUST00000129269 MycnP03966 462 aaKnown RBP17.31■□□□□ 0.36
Stag1-206ENSMUST00000129269 Nsd2Q8BVE8 1365 aa17.3■□□□□ 0.36
Stag1-206ENSMUST00000129269 Duox2A2AQ99 1517 aa17.3■□□□□ 0.36
Stag1-206ENSMUST00000129269 GphnQ8BUV3 769 aaKnown RBP17.29■□□□□ 0.36
Stag1-206ENSMUST00000129269 Q8C5K5 320 aa17.28■□□□□ 0.36
Stag1-206ENSMUST00000129269 Acsbg1Q99PU5 721 aa17.28■□□□□ 0.36
Stag1-206ENSMUST00000129269 Zfp644E9QA22 1323 aa17.28■□□□□ 0.36
Stag1-206ENSMUST00000129269 HnrnpmQ9D0E1 729 aaKnown RBP17.28■□□□□ 0.36
Stag1-206ENSMUST00000129269 Speer4bQ9D9F7 267 aa17.28■□□□□ 0.36
Stag1-206ENSMUST00000129269 Usp16Q99LG0 825 aa17.27■□□□□ 0.36
Stag1-206ENSMUST00000129269 Prdm16A2A935 1275 aa17.27■□□□□ 0.36
Stag1-206ENSMUST00000129269 G3bp1P97855 465 aaKnown RBP17.27■□□□□ 0.35
Stag1-206ENSMUST00000129269 Kri1Q8VDQ9 704 aaKnown RBP17.27■□□□□ 0.35
Stag1-206ENSMUST00000129269 Slc5a4bQ91ZP4 660 aa17.27■□□□□ 0.35
Stag1-206ENSMUST00000129269 Dnajc5bQ9CQ94 199 aa17.26■□□□□ 0.35
Stag1-206ENSMUST00000129269 Efcab5A0JP43 1406 aa17.26■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 41.1 ms