RNA–Protein interactions for RNA: ENSMUST00000117601.7

Limch1-203, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 5 BASIC

Gene Limch1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-203ENSMUST00000117601 Rundc1Q0VDN7 615 aa11.54□□□□□ -0.56
Limch1-203ENSMUST00000117601 Cep170Q6A065 1588 aa11.54□□□□□ -0.56
Limch1-203ENSMUST00000117601 Lemd3Q9WU40 921 aa11.54□□□□□ -0.56
Limch1-203ENSMUST00000117601 Trpm2Q91YD4 1506 aa11.54□□□□□ -0.56
Limch1-203ENSMUST00000117601 Cd109Q8R422 1442 aa11.53□□□□□ -0.56
Limch1-203ENSMUST00000117601 Lamc1P02468 1607 aaKnown RBP11.52□□□□□ -0.57
Limch1-203ENSMUST00000117601 AI481877A2ALV5 1481 aa11.52□□□□□ -0.57
Limch1-203ENSMUST00000117601 Adgrl2Q8JZZ7 1487 aa11.52□□□□□ -0.57
Limch1-203ENSMUST00000117601 Clstn2Q9ER65 966 aa11.51□□□□□ -0.57
Limch1-203ENSMUST00000117601 Hdac5Q9Z2V6 1113 aa11.51□□□□□ -0.57
Limch1-203ENSMUST00000117601 Abcc3B2RX12 1523 aa11.51□□□□□ -0.57
Limch1-203ENSMUST00000117601 Kidins220E9Q9B7 1793 aa11.51□□□□□ -0.57
Limch1-203ENSMUST00000117601 Sall3Q62255 1320 aa11.51□□□□□ -0.57
Limch1-203ENSMUST00000117601 Washc2Q6PGL7 1334 aa11.51□□□□□ -0.57
Limch1-203ENSMUST00000117601 Zfyve16Q80U44 1528 aa11.51□□□□□ -0.57
Limch1-203ENSMUST00000117601 Atp7aQ64430 1491 aa11.5□□□□□ -0.57
Limch1-203ENSMUST00000117601 Dapk1Q80YE7 1442 aa11.5□□□□□ -0.57
Limch1-203ENSMUST00000117601 Cfap74Q3UY96 1578 aa11.5□□□□□ -0.57
Limch1-203ENSMUST00000117601 Card11Q8CIS0 1159 aa11.49□□□□□ -0.57
Limch1-203ENSMUST00000117601 Pdcd11Q6NS46 1862 aaKnown RBP11.49□□□□□ -0.57
Limch1-203ENSMUST00000117601 Prdm16A2A935 1275 aa11.49□□□□□ -0.57
Limch1-203ENSMUST00000117601 Gtf3c5Q8R2T8 520 aa11.49□□□□□ -0.57
Limch1-203ENSMUST00000117601 Kiaa1210E9Q0C6 1637 aa11.48□□□□□ -0.57
Limch1-203ENSMUST00000117601 Kif21bQ9QXL1 1668 aa11.48□□□□□ -0.57
Limch1-203ENSMUST00000117601 Ifit1bl1D3Z6F0 470 aa11.48□□□□□ -0.57
Limch1-203ENSMUST00000117601 PtprgQ05909 1442 aa11.48□□□□□ -0.57
Limch1-203ENSMUST00000117601 Cdk13Q69ZA1 1511 aaKnown RBP11.48□□□□□ -0.57
Limch1-203ENSMUST00000117601 Ppp1r18Q8BQ30 594 aa11.47□□□□□ -0.57
Limch1-203ENSMUST00000117601 Abca9Q8K449 1623 aa11.47□□□□□ -0.57
Limch1-203ENSMUST00000117601 Mug2P28666 1451 aa11.47□□□□□ -0.57
Limch1-203ENSMUST00000117601 Stk24Q99KH8 431 aa11.47□□□□□ -0.57
Limch1-203ENSMUST00000117601 Camsap2Q8C1B1 1461 aa11.46□□□□□ -0.57
Limch1-203ENSMUST00000117601 Kdm2aP59997 1161 aa11.46□□□□□ -0.58
Limch1-203ENSMUST00000117601 Mroh3A0A1D5RM54 893 aa11.45□□□□□ -0.58
Limch1-203ENSMUST00000117601 Fam71e1A1L3C1 212 aa11.45□□□□□ -0.58
Limch1-203ENSMUST00000117601 Dot1lQ6XZL8 1540 aa11.45□□□□□ -0.58
Limch1-203ENSMUST00000117601 Mast1Q9R1L5 1570 aa11.45□□□□□ -0.58
Limch1-203ENSMUST00000117601 Ptch1Q61115 1434 aa11.44□□□□□ -0.58
Limch1-203ENSMUST00000117601 Tarbp1E9Q368 1579 aa11.44□□□□□ -0.58
Limch1-203ENSMUST00000117601 Usp54Q8BL06 1588 aaKnown RBP11.44□□□□□ -0.58
Limch1-203ENSMUST00000117601 Wwc2Q6NXJ0 1187 aa11.44□□□□□ -0.58
Limch1-203ENSMUST00000117601 Myom3A2ABU4 1439 aa11.43□□□□□ -0.58
Limch1-203ENSMUST00000117601 Ncoa1P70365 1447 aa11.42□□□□□ -0.58
Limch1-203ENSMUST00000117601 Ak9G3UYQ4 1894 aa11.42□□□□□ -0.58
Limch1-203ENSMUST00000117601 Pprc1Q6NZN1 1644 aa11.42□□□□□ -0.58
Limch1-203ENSMUST00000117601 Xrn1P97789 1719 aaKnown RBP11.41□□□□□ -0.58
Limch1-203ENSMUST00000117601 Depdc5P61460 1591 aa11.41□□□□□ -0.58
Limch1-203ENSMUST00000117601 Os9Q8K2C7 672 aa11.4□□□□□ -0.58
Limch1-203ENSMUST00000117601 Mbd5B1AYB6 1498 aa11.4□□□□□ -0.58
Limch1-203ENSMUST00000117601 ShprhQ7TPQ3 1674 aa11.4□□□□□ -0.58
Limch1-203ENSMUST00000117601 Adgrl3Q80TS3 1537 aa11.4□□□□□ -0.58
Limch1-203ENSMUST00000117601 Smg6P61406 1418 aaKnown RBP11.4□□□□□ -0.58
Limch1-203ENSMUST00000117601 Hecw1Q8K4P8 1604 aa11.4□□□□□ -0.59
Limch1-203ENSMUST00000117601 BccipQ9CWI3 316 aa11.39□□□□□ -0.59
Limch1-203ENSMUST00000117601 Col17a1Q07563 1470 aa11.39□□□□□ -0.59
Limch1-203ENSMUST00000117601 Edc4Q3UJB9 1406 aaKnown RBP11.39□□□□□ -0.59
Limch1-203ENSMUST00000117601 Mrs2Q5NCE8 434 aa11.38□□□□□ -0.59
Limch1-203ENSMUST00000117601 Nos1Q9Z0J4 1429 aa11.38□□□□□ -0.59
Limch1-203ENSMUST00000117601 OvosQ3UU35 1456 aa11.38□□□□□ -0.59
Limch1-203ENSMUST00000117601 Ttc21bQ0HA38 1315 aa11.38□□□□□ -0.59
Limch1-203ENSMUST00000117601 Kif1bQ60575 1816 aaKnown RBP11.37□□□□□ -0.59
Limch1-203ENSMUST00000117601 Exoc6Q8R313 802 aa11.37□□□□□ -0.59
Limch1-203ENSMUST00000117601 Neurl4Q5NCX5 1563 aa11.35□□□□□ -0.59
Limch1-203ENSMUST00000117601 Polr3aB2RXC6 1390 aa11.35□□□□□ -0.59
Limch1-203ENSMUST00000117601 Rock1P70335 1354 aa11.35□□□□□ -0.59
Limch1-203ENSMUST00000117601 Cwc22Q8C5N3 908 aaKnown RBP11.35□□□□□ -0.59
Limch1-203ENSMUST00000117601 Robo2Q7TPD3 1470 aa11.34□□□□□ -0.59
Limch1-203ENSMUST00000117601 Yeats2Q3TUF7 1407 aa11.34□□□□□ -0.59
Limch1-203ENSMUST00000117601 Naip6Q9JIB6 1403 aa11.34□□□□□ -0.59
Limch1-203ENSMUST00000117601 Nsd2Q8BVE8 1365 aa11.34□□□□□ -0.59
Limch1-203ENSMUST00000117601 Znf518aB2RRF6 1478 aaKnown RBP11.33□□□□□ -0.6
Limch1-203ENSMUST00000117601 Adamts13Q769J6 1426 aa11.33□□□□□ -0.6
Limch1-203ENSMUST00000117601 Prdm10Q3UTQ7 1184 aa11.32□□□□□ -0.6
Limch1-203ENSMUST00000117601 Abca6Q8K441 1624 aa11.32□□□□□ -0.6
Limch1-203ENSMUST00000117601 Fan1Q69ZT1 1020 aa11.32□□□□□ -0.6
Limch1-203ENSMUST00000117601 RalgapbQ8BQZ4 1484 aa11.32□□□□□ -0.6
Limch1-203ENSMUST00000117601 Abca17E9PX95 1733 aa11.32□□□□□ -0.6
Limch1-203ENSMUST00000117601 Cpsf1Q9EPU4 1441 aaKnown RBP11.31□□□□□ -0.6
Limch1-203ENSMUST00000117601 DroshaQ5HZJ0 1373 aaKnown RBP11.31□□□□□ -0.6
Limch1-203ENSMUST00000117601 Slc4a2P13808 1237 aaKnown RBP11.31□□□□□ -0.6
Limch1-203ENSMUST00000117601 Dnajc5gQ8C632 165 aa11.31□□□□□ -0.6
Limch1-203ENSMUST00000117601 Ylpm1Q9R0I7 1386 aaKnown RBP11.31□□□□□ -0.6
Limch1-203ENSMUST00000117601 Gm20521D3Z5F7 333 aa11.31□□□□□ -0.6
Limch1-203ENSMUST00000117601 Myo5cE9Q1F5 1742 aa11.3□□□□□ -0.6
Limch1-203ENSMUST00000117601 Gli2Q0VGT2 1544 aa11.3□□□□□ -0.6
Limch1-203ENSMUST00000117601 Iqgap1Q9JKF1 1657 aaKnown RBP11.3□□□□□ -0.6
Limch1-203ENSMUST00000117601 ErbinQ80TH2 1402 aa11.29□□□□□ -0.6
Limch1-203ENSMUST00000117601 Rock2P70336 1388 aa11.29□□□□□ -0.6
Limch1-203ENSMUST00000117601 Tulp4Q9JIL5 1547 aa11.28□□□□□ -0.6
Limch1-203ENSMUST00000117601 Znf710Q3U288 666 aa11.28□□□□□ -0.6
Limch1-203ENSMUST00000117601 Dip2cE9PWR4 1557 aa11.28□□□□□ -0.6
Limch1-203ENSMUST00000117601 Abcc6Q9R1S7 1498 aa11.28□□□□□ -0.6
Limch1-203ENSMUST00000117601 Afap1Q80YS6 731 aa11.28□□□□□ -0.6
Limch1-203ENSMUST00000117601 Eif5bQ05D44 1216 aaKnown RBP11.28□□□□□ -0.6
Limch1-203ENSMUST00000117601 Plekhg5Q66T02 1073 aa11.28□□□□□ -0.6
Limch1-203ENSMUST00000117601 Cfap65Q3V0B4 1847 aa11.27□□□□□ -0.6
Limch1-203ENSMUST00000117601 Fndc1E9Q043 1732 aa11.27□□□□□ -0.61
Limch1-203ENSMUST00000117601 Gm13695A2AK44 830 aa11.27□□□□□ -0.61
Limch1-203ENSMUST00000117601 Srcin1Q9QWI6 1250 aa11.27□□□□□ -0.61
Limch1-203ENSMUST00000117601 Srpk2O54781 681 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms