RNA–Protein interactions for RNA: ENSMUST00000111045.8

Bdnf-205, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,973 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-205ENSMUST00000111045 Duox2A2AQ99 1517 aa15.1■□□□□ 0.01
Bdnf-205ENSMUST00000111045 Lamc3Q9R0B6 1581 aa15.09■□□□□ 0.01
Bdnf-205ENSMUST00000111045 AqrQ8CFQ3 1481 aaKnown RBP15.09■□□□□ 0.01
Bdnf-205ENSMUST00000111045 Map3k1P53349 1493 aa15.09■□□□□ 0.01
Bdnf-205ENSMUST00000111045 Nom1Q3UFM5 854 aaKnown RBP15.09■□□□□ 0.01
Bdnf-205ENSMUST00000111045 Grwd1Q810D6 446 aaKnown RBP15.08■□□□□ 0
Bdnf-205ENSMUST00000111045 Mphosph9A6H5Y1 991 aa15.08■□□□□ 0
Bdnf-205ENSMUST00000111045 Pkd2O35245 966 aa15.07■□□□□ 0
Bdnf-205ENSMUST00000111045 Exoc6Q8R313 802 aa15.07■□□□□ 0
Bdnf-205ENSMUST00000111045 Ttll13A4Q9F6 804 aa15.05■□□□□ 0
Bdnf-205ENSMUST00000111045 Mtus2Q3UHD3 1353 aa15.05■□□□□ 0
Bdnf-205ENSMUST00000111045 Irf5P56477 497 aa15.05■□□□□ -0
Bdnf-205ENSMUST00000111045 Lekr1B2RVN1 116 aa15.04■□□□□ -0
Bdnf-205ENSMUST00000111045 Tiam1Q60610 1591 aa15.04■□□□□ -0
Bdnf-205ENSMUST00000111045 PogzQ8BZH4 1409 aaKnown RBP15.04■□□□□ -0
Bdnf-205ENSMUST00000111045 AppP12023 770 aa15.02■□□□□ -0
Bdnf-205ENSMUST00000111045 Plin1Q8CGN5 517 aa15.02■□□□□ -0
Bdnf-205ENSMUST00000111045 Gse1Q3U3C9 1213 aa15.02■□□□□ -0
Bdnf-205ENSMUST00000111045 Paf1Q8K2T8 535 aa15.02□□□□□ -0.01
Bdnf-205ENSMUST00000111045 Prdm10Q3UTQ7 1184 aa15.01□□□□□ -0.01
Bdnf-205ENSMUST00000111045 Tnnt1O88346 262 aa15.01□□□□□ -0.01
Bdnf-205ENSMUST00000111045 Sh3bp5Q9Z131 463 aa15□□□□□ -0.01
Bdnf-205ENSMUST00000111045 Ubap1lG3UW59 384 aa15□□□□□ -0.01
Bdnf-205ENSMUST00000111045 Gys2Q8VCB3 704 aa15□□□□□ -0.01
Bdnf-205ENSMUST00000111045 Irx6Q9ER75 438 aa15□□□□□ -0.01
Bdnf-205ENSMUST00000111045 Ak7Q9D2H2 614 aa14.99□□□□□ -0.01
Bdnf-205ENSMUST00000111045 TnnQ80Z71 1560 aa14.98□□□□□ -0.01
Bdnf-205ENSMUST00000111045 Pnmal2G3X9N3 661 aa14.97□□□□□ -0.01
Bdnf-205ENSMUST00000111045 Kiaa0753Q6A000 959 aa14.96□□□□□ -0.01
Bdnf-205ENSMUST00000111045 Gtf3c6Q9D8P7 227 aa14.96□□□□□ -0.01
Bdnf-205ENSMUST00000111045 Cux1P53564 1515 aa14.96□□□□□ -0.01
Bdnf-205ENSMUST00000111045 WrnO09053 1401 aa14.96□□□□□ -0.01
Bdnf-205ENSMUST00000111045 Clcn1Q64347 994 aa14.96□□□□□ -0.01
Bdnf-205ENSMUST00000111045 Smg6P61406 1418 aaKnown RBP14.96□□□□□ -0.01
Bdnf-205ENSMUST00000111045 Pcf11G3X9Z4 1553 aa14.96□□□□□ -0.02
Bdnf-205ENSMUST00000111045 Anapc15-psA0A140T8L6 141 aa14.95□□□□□ -0.02
Bdnf-205ENSMUST00000111045 Trak1Q6PD31 939 aa14.95□□□□□ -0.02
Bdnf-205ENSMUST00000111045 Zfp644E9QA22 1323 aa14.95□□□□□ -0.02
Bdnf-205ENSMUST00000111045 Rrp7aQ9D1C9 280 aaKnown RBP14.95□□□□□ -0.02
Bdnf-205ENSMUST00000111045 Fhad1A6PWD2 1420 aa14.95□□□□□ -0.02
Bdnf-205ENSMUST00000111045 Gm973E9Q295 1059 aa14.94□□□□□ -0.02
Bdnf-205ENSMUST00000111045 Tomm22Q9CPQ3 142 aa14.93□□□□□ -0.02
Bdnf-205ENSMUST00000111045 Card11Q8CIS0 1159 aa14.93□□□□□ -0.02
Bdnf-205ENSMUST00000111045 Slc4a1apE9PX68 744 aa14.93□□□□□ -0.02
Bdnf-205ENSMUST00000111045 Cald1E9QA15 768 aaKnown RBP14.93□□□□□ -0.02
Bdnf-205ENSMUST00000111045 Map7O88735 730 aa14.93□□□□□ -0.02
Bdnf-205ENSMUST00000111045 Skap1Q3UUV5 355 aa14.93□□□□□ -0.02
Bdnf-205ENSMUST00000111045 Kif3aP28741 701 aa14.92□□□□□ -0.02
Bdnf-205ENSMUST00000111045 Casc1Q6TDU8 730 aa14.91□□□□□ -0.02
Bdnf-205ENSMUST00000111045 Ankrd26Q811D2 1581 aa14.91□□□□□ -0.02
Bdnf-205ENSMUST00000111045 Taf3Q5HZG4 932 aa14.9□□□□□ -0.02
Bdnf-205ENSMUST00000111045 Ssh1Q76I79 1042 aa14.89□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Slx4Q6P1D7 1565 aa14.89□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Mcm4P49717 862 aa14.89□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Ccdc94Q9D6J3 314 aa14.89□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Sox12Q04890 314 aa14.88□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Mbd3Q9Z2D8 285 aaKnown RBP14.88□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Mfap1aC0HKD8 439 aaKnown RBP14.88□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Mfap1bC0HKD9 439 aaKnown RBP14.88□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Map4P27546 1125 aaKnown RBP14.88□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Fez1Q8K0X8 392 aa14.88□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Gtpbp4Q99ME9 634 aaKnown RBP14.88□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Rundc1Q0VDN7 615 aa14.88□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Zrsr2Q62377 462 aaKnown RBP14.87□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Vps8Q0P5W1 1427 aa14.87□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Usp47Q8BY87 1376 aa14.87□□□□□ -0.03
Bdnf-205ENSMUST00000111045 CalrP14211 416 aaKnown RBP14.87□□□□□ -0.03
Bdnf-205ENSMUST00000111045 UacaQ8CGB3 1411 aa14.87□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Clstn2Q9ER65 966 aa14.86□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Plekhh2Q8C115 1491 aa14.86□□□□□ -0.03
Bdnf-205ENSMUST00000111045 AknaQ80VW7 1404 aa14.86□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Stac3Q8BZ71 360 aa14.85□□□□□ -0.03
Bdnf-205ENSMUST00000111045 EprsQ8CGC7 1512 aaKnown RBP14.85□□□□□ -0.03
Bdnf-205ENSMUST00000111045 CadpsQ80TJ1 1355 aa14.85□□□□□ -0.03
Bdnf-205ENSMUST00000111045 3425401B19RikD3Z1D3 1412 aa14.85□□□□□ -0.03
Bdnf-205ENSMUST00000111045 NcapgE9PWG6 1004 aa14.85□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Gm7298A0A0N4SVU1 1476 aa14.85□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Rfx1P48377 963 aa14.84□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Dnajc5bQ9CQ94 199 aa14.84□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Ncbp3Q8BZR9 615 aaKnown RBP14.84□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Rwdd1Q9CQK7 243 aa14.84□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Ankrd36D3Z4K0 1415 aa14.84□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Calcoco2A2A6M5 331 aa14.83□□□□□ -0.03
Bdnf-205ENSMUST00000111045 Urb2E9Q7L1 1524 aaKnown RBP14.83□□□□□ -0.03
Bdnf-205ENSMUST00000111045 RdxP26043 583 aaKnown RBP14.83□□□□□ -0.04
Bdnf-205ENSMUST00000111045 Kdm2aP59997 1161 aa14.83□□□□□ -0.04
Bdnf-205ENSMUST00000111045 Rnf214Q8BFU3 668 aaKnown RBP14.83□□□□□ -0.04
Bdnf-205ENSMUST00000111045 Eif4g1Q6NZJ6 1600 aaKnown RBP14.83□□□□□ -0.04
Bdnf-205ENSMUST00000111045 Prkrip1Q9CWV6 186 aaKnown RBP14.83□□□□□ -0.04
Bdnf-205ENSMUST00000111045 Il4rP16382 810 aa14.82□□□□□ -0.04
Bdnf-205ENSMUST00000111045 Anp32eP97822 260 aaKnown RBP14.82□□□□□ -0.04
Bdnf-205ENSMUST00000111045 Polr1aO35134 1717 aaKnown RBP14.82□□□□□ -0.04
Bdnf-205ENSMUST00000111045 SynmQ70IV5 1561 aa14.81□□□□□ -0.04
Bdnf-205ENSMUST00000111045 Cwc22Q8C5N3 908 aaKnown RBP14.81□□□□□ -0.04
Bdnf-205ENSMUST00000111045 Mapk8ip3Q9ESN9 1337 aa14.81□□□□□ -0.04
Bdnf-205ENSMUST00000111045 Plb1Q3TTY0 1478 aa14.81□□□□□ -0.04
Bdnf-205ENSMUST00000111045 Mak16Q8BGS0 296 aaKnown RBP14.8□□□□□ -0.04
Bdnf-205ENSMUST00000111045 Nectin2P32507 530 aa14.8□□□□□ -0.04
Bdnf-205ENSMUST00000111045 Isy1Q69ZQ2 285 aaKnown RBP14.8□□□□□ -0.04
Bdnf-205ENSMUST00000111045 Pcmtd1P59913 357 aa14.79□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms