RNA–Protein interactions for RNA: ENSMUST00000100497.10

Actb-201, Transcript of Actin, cytoplasmic 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Actb, Length 1,920 nt, Biotype protein coding, Subcellular localisation Axon, Cell leading edge, Cytoplasm, Cytosol, Dendrite, Endoplasmic reticulum, Exosome, Growth cone, Lamellipodium, Perinuclear, Ribosome, Somatodendritic compartment .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Actb-201ENSMUST00000100497 Clasp1Q80TV8 1535 aaKnown RBP17.04■□□□□ 0.32
Actb-201ENSMUST00000100497 Trappc8E9PWG2 1437 aa17.04■□□□□ 0.32
Actb-201ENSMUST00000100497 Myom3A2ABU4 1439 aa17.04■□□□□ 0.32
Actb-201ENSMUST00000100497 Rock2P70336 1388 aa17.04■□□□□ 0.32
Actb-201ENSMUST00000100497 Abca17E9PX95 1733 aa17.03■□□□□ 0.32
Actb-201ENSMUST00000100497 Rrp7aQ9D1C9 280 aaKnown RBP17.03■□□□□ 0.32
Actb-201ENSMUST00000100497 Dhx9O70133 1380 aaKnown RBP17.02■□□□□ 0.32
Actb-201ENSMUST00000100497 Kif1bQ60575 1816 aaKnown RBP17.01■□□□□ 0.31
Actb-201ENSMUST00000100497 Dapk1Q80YE7 1442 aa17.01■□□□□ 0.31
Actb-201ENSMUST00000100497 Iqgap1Q9JKF1 1657 aaKnown RBP17.01■□□□□ 0.31
Actb-201ENSMUST00000100497 Arid3cA6PWV5 409 aa17■□□□□ 0.31
Actb-201ENSMUST00000100497 Asxl1P59598 1514 aa16.99■□□□□ 0.31
Actb-201ENSMUST00000100497 Dot1lQ6XZL8 1540 aa16.99■□□□□ 0.31
Actb-201ENSMUST00000100497 Polr3aB2RXC6 1390 aa16.99■□□□□ 0.31
Actb-201ENSMUST00000100497 Kidins220E9Q9B7 1793 aa16.99■□□□□ 0.31
Actb-201ENSMUST00000100497 Plekhg5Q66T02 1073 aa16.99■□□□□ 0.31
Actb-201ENSMUST00000100497 Cd109Q8R422 1442 aa16.98■□□□□ 0.31
Actb-201ENSMUST00000100497 Ppp1r18Q8BQ30 594 aa16.98■□□□□ 0.31
Actb-201ENSMUST00000100497 Nsd2Q8BVE8 1365 aa16.98■□□□□ 0.31
Actb-201ENSMUST00000100497 Mug2P28666 1451 aa16.98■□□□□ 0.31
Actb-201ENSMUST00000100497 Spag9Q58A65 1321 aaKnown RBP16.97■□□□□ 0.31
Actb-201ENSMUST00000100497 RalgapbQ8BQZ4 1484 aa16.97■□□□□ 0.31
Actb-201ENSMUST00000100497 Naip6Q9JIB6 1403 aa16.97■□□□□ 0.31
Actb-201ENSMUST00000100497 Ttc37F8VPK0 1563 aa16.96■□□□□ 0.31
Actb-201ENSMUST00000100497 Rgl3Q3UYI5 709 aa16.96■□□□□ 0.31
Actb-201ENSMUST00000100497 Sin3aQ60520 1274 aaKnown RBP16.96■□□□□ 0.31
Actb-201ENSMUST00000100497 Robo2Q7TPD3 1470 aa16.95■□□□□ 0.3
Actb-201ENSMUST00000100497 Gm13695A2AK44 830 aa16.95■□□□□ 0.3
Actb-201ENSMUST00000100497 Setd1aE9PYH6 1716 aa16.95■□□□□ 0.3
Actb-201ENSMUST00000100497 Zfyve16Q80U44 1528 aa16.92■□□□□ 0.3
Actb-201ENSMUST00000100497 Card11Q8CIS0 1159 aa16.92■□□□□ 0.3
Actb-201ENSMUST00000100497 Atp7aQ64430 1491 aa16.91■□□□□ 0.3
Actb-201ENSMUST00000100497 AglF8VPN4 1532 aa16.91■□□□□ 0.3
Actb-201ENSMUST00000100497 AdgbG3UZ78 1657 aa16.9■□□□□ 0.3
Actb-201ENSMUST00000100497 Rundc1Q0VDN7 615 aa16.9■□□□□ 0.3
Actb-201ENSMUST00000100497 Usp54Q8BL06 1588 aaKnown RBP16.9■□□□□ 0.3
Actb-201ENSMUST00000100497 ShprhQ7TPQ3 1674 aa16.89■□□□□ 0.3
Actb-201ENSMUST00000100497 Depdc5P61460 1591 aa16.88■□□□□ 0.29
Actb-201ENSMUST00000100497 Myo5cE9Q1F5 1742 aa16.88■□□□□ 0.29
Actb-201ENSMUST00000100497 Arid4bA2CG63 1314 aaKnown RBP16.88■□□□□ 0.29
Actb-201ENSMUST00000100497 Aplp2Q06335 707 aa16.87■□□□□ 0.29
Actb-201ENSMUST00000100497 Mapk8ip2Q9ERE9 830 aa16.87■□□□□ 0.29
Actb-201ENSMUST00000100497 Plch2A2AP18 1501 aa16.87■□□□□ 0.29
Actb-201ENSMUST00000100497 Ylpm1Q9R0I7 1386 aaKnown RBP16.87■□□□□ 0.29
Actb-201ENSMUST00000100497 Pde4cQ3UEI1 686 aa16.86■□□□□ 0.29
Actb-201ENSMUST00000100497 Xrn1P97789 1719 aaKnown RBP16.86■□□□□ 0.29
Actb-201ENSMUST00000100497 Abca9Q8K449 1623 aa16.86■□□□□ 0.29
Actb-201ENSMUST00000100497 Lemd3Q9WU40 921 aa16.85■□□□□ 0.29
Actb-201ENSMUST00000100497 Nos1Q9Z0J4 1429 aa16.84■□□□□ 0.29
Actb-201ENSMUST00000100497 Uggt2E9Q4X2 1504 aa16.83■□□□□ 0.29
Actb-201ENSMUST00000100497 Cdk13Q69ZA1 1511 aaKnown RBP16.83■□□□□ 0.29
Actb-201ENSMUST00000100497 Tarbp1E9Q368 1579 aa16.83■□□□□ 0.28
Actb-201ENSMUST00000100497 Znf518aB2RRF6 1478 aaKnown RBP16.82■□□□□ 0.28
Actb-201ENSMUST00000100497 Znf710Q3U288 666 aa16.82■□□□□ 0.28
Actb-201ENSMUST00000100497 Washc2Q6PGL7 1334 aa16.81■□□□□ 0.28
Actb-201ENSMUST00000100497 Edc4Q3UJB9 1406 aaKnown RBP16.8■□□□□ 0.28
Actb-201ENSMUST00000100497 Map3k5O35099 1380 aa16.79■□□□□ 0.28
Actb-201ENSMUST00000100497 NrdcQ8BHG1 1161 aa16.79■□□□□ 0.28
Actb-201ENSMUST00000100497 AnkarA2RT91 1465 aa16.79■□□□□ 0.28
Actb-201ENSMUST00000100497 Csrnp3P59055 597 aa16.78■□□□□ 0.28
Actb-201ENSMUST00000100497 Grwd1Q810D6 446 aaKnown RBP16.78■□□□□ 0.28
Actb-201ENSMUST00000100497 OvosQ3UU35 1456 aa16.78■□□□□ 0.28
Actb-201ENSMUST00000100497 Atp10aO54827 1508 aa16.77■□□□□ 0.28
Actb-201ENSMUST00000100497 Hnrnpul2Q00PI9 745 aaKnown RBP16.77■□□□□ 0.28
Actb-201ENSMUST00000100497 Kdm5cP41230 1554 aa16.77■□□□□ 0.27
Actb-201ENSMUST00000100497 Anp32bQ9EST5 272 aaKnown RBP16.76■□□□□ 0.27
Actb-201ENSMUST00000100497 Zmym4A2A791 1549 aaKnown RBP16.76■□□□□ 0.27
Actb-201ENSMUST00000100497 Topbp1Q6ZQF0 1515 aa16.75■□□□□ 0.27
Actb-201ENSMUST00000100497 Kiaa0556Q8C753 1610 aa16.74■□□□□ 0.27
Actb-201ENSMUST00000100497 Mroh3A0A1D5RM54 893 aa16.74■□□□□ 0.27
Actb-201ENSMUST00000100497 Fndc1E9Q043 1732 aa16.74■□□□□ 0.27
Actb-201ENSMUST00000100497 Cep152A2AUM9 1736 aaKnown RBP16.74■□□□□ 0.27
Actb-201ENSMUST00000100497 Pcdh10E9PXQ7 1057 aa16.74■□□□□ 0.27
Actb-201ENSMUST00000100497 Mrs2Q5NCE8 434 aa16.73■□□□□ 0.27
Actb-201ENSMUST00000100497 PnisrA2AJT4 805 aaKnown RBP16.72■□□□□ 0.27
Actb-201ENSMUST00000100497 Stard8Q8K031 1019 aa16.72■□□□□ 0.27
Actb-201ENSMUST00000100497 Adamts13Q769J6 1426 aa16.72■□□□□ 0.27
Actb-201ENSMUST00000100497 Cdc42bpgQ80UW5 1551 aa16.72■□□□□ 0.27
Actb-201ENSMUST00000100497 Zbtb7cQ8VCZ7 619 aa16.72■□□□□ 0.27
Actb-201ENSMUST00000100497 Tulp4Q9JIL5 1547 aa16.71■□□□□ 0.27
Actb-201ENSMUST00000100497 Tmem131lQ3U3D7 1597 aa16.71■□□□□ 0.27
Actb-201ENSMUST00000100497 Abcc6Q9R1S7 1498 aa16.71■□□□□ 0.26
Actb-201ENSMUST00000100497 Tubgcp6G5E8P0 1769 aa16.7■□□□□ 0.26
Actb-201ENSMUST00000100497 Akap12Q9WTQ5 1684 aa16.7■□□□□ 0.26
Actb-201ENSMUST00000100497 Kif3bQ61771 747 aa16.7■□□□□ 0.26
Actb-201ENSMUST00000100497 Iqgap3F8VQ29 1632 aa16.7■□□□□ 0.26
Actb-201ENSMUST00000100497 Ifit1bl1D3Z6F0 470 aa16.68■□□□□ 0.26
Actb-201ENSMUST00000100497 CenpbP27790 599 aa16.68■□□□□ 0.26
Actb-201ENSMUST00000100497 Abca6Q8K441 1624 aa16.67■□□□□ 0.26
Actb-201ENSMUST00000100497 Exoc6Q8R313 802 aa16.67■□□□□ 0.26
Actb-201ENSMUST00000100497 ErbinQ80TH2 1402 aa16.67■□□□□ 0.26
Actb-201ENSMUST00000100497 Sbno1Q689Z5 1390 aa16.67■□□□□ 0.26
Actb-201ENSMUST00000100497 Synj2Q9D2G5 1434 aa16.66■□□□□ 0.26
Actb-201ENSMUST00000100497 Abca8aQ8K442 1620 aa16.66■□□□□ 0.26
Actb-201ENSMUST00000100497 Ttc21bQ0HA38 1315 aa16.66■□□□□ 0.26
Actb-201ENSMUST00000100497 Hecw2Q6I6G8 1578 aa16.66■□□□□ 0.26
Actb-201ENSMUST00000100497 Prex1Q69ZK0 1650 aa16.64■□□□□ 0.25
Actb-201ENSMUST00000100497 Gli2Q0VGT2 1544 aa16.64■□□□□ 0.25
Actb-201ENSMUST00000100497 Efcab6Q6P1E8 1516 aa16.64■□□□□ 0.25
Actb-201ENSMUST00000100497 Pola1P33609 1465 aa16.63■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 9501.8 ms