RNA–Protein interactions for RNA: ENSMUST00000064098.13

Ldb3-204, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-204ENSMUST00000064098 Hnrnpul2Q00PI9 745 aaKnown RBP17.46■□□□□ 0.39
Ldb3-204ENSMUST00000064098 Naip6Q9JIB6 1403 aa17.45■□□□□ 0.38
Ldb3-204ENSMUST00000064098 Cdc42bpgQ80UW5 1551 aa17.45■□□□□ 0.38
Ldb3-204ENSMUST00000064098 Trak1Q6PD31 939 aa17.44■□□□□ 0.38
Ldb3-204ENSMUST00000064098 Gli2Q0VGT2 1544 aa17.44■□□□□ 0.38
Ldb3-204ENSMUST00000064098 Ankrd36D3Z4K0 1415 aa17.42■□□□□ 0.38
Ldb3-204ENSMUST00000064098 ShprhQ7TPQ3 1674 aa17.41■□□□□ 0.38
Ldb3-204ENSMUST00000064098 NpatQ8BMA5 1420 aa17.4■□□□□ 0.38
Ldb3-204ENSMUST00000064098 Supt6hQ62383 1726 aaKnown RBP17.4■□□□□ 0.38
Ldb3-204ENSMUST00000064098 Pkd2O35245 966 aa17.39■□□□□ 0.37
Ldb3-204ENSMUST00000064098 Asxl1P59598 1514 aa17.39■□□□□ 0.37
Ldb3-204ENSMUST00000064098 Topbp1Q6ZQF0 1515 aa17.39■□□□□ 0.37
Ldb3-204ENSMUST00000064098 Qser1A2BIE1 1698 aa17.38■□□□□ 0.37
Ldb3-204ENSMUST00000064098 Lamc1P02468 1607 aaKnown RBP17.38■□□□□ 0.37
Ldb3-204ENSMUST00000064098 Kif1bQ60575 1816 aaKnown RBP17.38■□□□□ 0.37
Ldb3-204ENSMUST00000064098 PtprgQ05909 1442 aa17.38■□□□□ 0.37
Ldb3-204ENSMUST00000064098 Zmym4A2A791 1549 aaKnown RBP17.38■□□□□ 0.37
Ldb3-204ENSMUST00000064098 Plch2A2AP18 1501 aa17.38■□□□□ 0.37
Ldb3-204ENSMUST00000064098 Cfap65Q3V0B4 1847 aa17.38■□□□□ 0.37
Ldb3-204ENSMUST00000064098 Robo2Q7TPD3 1470 aa17.36■□□□□ 0.37
Ldb3-204ENSMUST00000064098 Cd109Q8R422 1442 aa17.35■□□□□ 0.37
Ldb3-204ENSMUST00000064098 Trpm1Q2TV84 1622 aa17.34■□□□□ 0.37
Ldb3-204ENSMUST00000064098 Uggt2E9Q4X2 1504 aa17.34■□□□□ 0.37
Ldb3-204ENSMUST00000064098 Hspa5P20029 655 aaKnown RBP17.33■□□□□ 0.37
Ldb3-204ENSMUST00000064098 Kif14L0N7N1 1674 aaKnown RBP17.33■□□□□ 0.37
Ldb3-204ENSMUST00000064098 Myo5cE9Q1F5 1742 aa17.33■□□□□ 0.37
Ldb3-204ENSMUST00000064098 Dhx9O70133 1380 aaKnown RBP17.33■□□□□ 0.37
Ldb3-204ENSMUST00000064098 Afap1Q80YS6 731 aa17.33■□□□□ 0.36
Ldb3-204ENSMUST00000064098 Myom3A2ABU4 1439 aa17.33■□□□□ 0.36
Ldb3-204ENSMUST00000064098 Kif21bQ9QXL1 1668 aa17.31■□□□□ 0.36
Ldb3-204ENSMUST00000064098 Naip5Q9R016 1403 aa17.31■□□□□ 0.36
Ldb3-204ENSMUST00000064098 Pcgf6Q99NA9 353 aa17.31■□□□□ 0.36
Ldb3-204ENSMUST00000064098 Nsd2Q8BVE8 1365 aa17.29■□□□□ 0.36
Ldb3-204ENSMUST00000064098 Ylpm1Q9R0I7 1386 aaKnown RBP17.29■□□□□ 0.36
Ldb3-204ENSMUST00000064098 Supt5hO55201 1082 aaKnown RBP17.29■□□□□ 0.36
Ldb3-204ENSMUST00000064098 Ttc21bQ0HA38 1315 aa17.28■□□□□ 0.36
Ldb3-204ENSMUST00000064098 Abca6Q8K441 1624 aa17.28■□□□□ 0.36
Ldb3-204ENSMUST00000064098 Atp7aQ64430 1491 aa17.28■□□□□ 0.36
Ldb3-204ENSMUST00000064098 TonslQ6NZL6 1363 aa17.27■□□□□ 0.36
Ldb3-204ENSMUST00000064098 Adamtsl3G3UXC7 1706 aa17.27■□□□□ 0.35
Ldb3-204ENSMUST00000064098 Prex1Q69ZK0 1650 aa17.26■□□□□ 0.35
Ldb3-204ENSMUST00000064098 AnkarA2RT91 1465 aa17.24■□□□□ 0.35
Ldb3-204ENSMUST00000064098 Rsph4aQ8BYM7 716 aa17.24■□□□□ 0.35
Ldb3-204ENSMUST00000064098 Usp47Q8BY87 1376 aa17.24■□□□□ 0.35
Ldb3-204ENSMUST00000064098 Tmem131lQ3U3D7 1597 aa17.23■□□□□ 0.35
Ldb3-204ENSMUST00000064098 Rprd2Q6NXI6 1469 aaKnown RBP17.22■□□□□ 0.35
Ldb3-204ENSMUST00000064098 Pik3c2gO70167 1506 aa17.22■□□□□ 0.35
Ldb3-204ENSMUST00000064098 Camsap2Q8C1B1 1461 aa17.22■□□□□ 0.35
Ldb3-204ENSMUST00000064098 Las1lA2BE28 776 aaKnown RBP17.22■□□□□ 0.35
Ldb3-204ENSMUST00000064098 Edc4Q3UJB9 1406 aaKnown RBP17.2■□□□□ 0.34
Ldb3-204ENSMUST00000064098 Safb2Q80YR5 991 aaKnown RBP17.2■□□□□ 0.34
Ldb3-204ENSMUST00000064098 Erich6D3Z6S9 713 aa17.19■□□□□ 0.34
Ldb3-204ENSMUST00000064098 DroshaQ5HZJ0 1373 aaKnown RBP17.18■□□□□ 0.34
Ldb3-204ENSMUST00000064098 Alpk3Q924C5 1678 aa17.17■□□□□ 0.34
Ldb3-204ENSMUST00000064098 Tarbp1E9Q368 1579 aa17.17■□□□□ 0.34
Ldb3-204ENSMUST00000064098 Dot1lQ6XZL8 1540 aa17.16■□□□□ 0.34
Ldb3-204ENSMUST00000064098 CltcQ68FD5 1675 aaKnown RBP17.16■□□□□ 0.34
Ldb3-204ENSMUST00000064098 Adamts7Q68SA9 1657 aa17.15■□□□□ 0.34
Ldb3-204ENSMUST00000064098 Aebp2Q9Z248 504 aaKnown RBP17.15■□□□□ 0.34
Ldb3-204ENSMUST00000064098 Hfm1D3Z4R1 1434 aa17.14■□□□□ 0.34
Ldb3-204ENSMUST00000064098 Rgl3Q3UYI5 709 aa17.14■□□□□ 0.33
Ldb3-204ENSMUST00000064098 MlecQ6ZQI3 291 aaKnown RBP17.14■□□□□ 0.33
Ldb3-204ENSMUST00000064098 Hdac5Q9Z2V6 1113 aa17.14■□□□□ 0.33
Ldb3-204ENSMUST00000064098 Talpid3E9PV87 1520 aa17.13■□□□□ 0.33
Ldb3-204ENSMUST00000064098 Myom2Q14BI5 1463 aa17.13■□□□□ 0.33
Ldb3-204ENSMUST00000064098 Arhgap23Q69ZH9 1483 aa17.13■□□□□ 0.33
Ldb3-204ENSMUST00000064098 Stk24Q99KH8 431 aa17.12■□□□□ 0.33
Ldb3-204ENSMUST00000064098 Rock1P70335 1354 aa17.12■□□□□ 0.33
Ldb3-204ENSMUST00000064098 Sall3Q62255 1320 aa17.12■□□□□ 0.33
Ldb3-204ENSMUST00000064098 Ppip5k1A2ARP1 1436 aa17.11■□□□□ 0.33
Ldb3-204ENSMUST00000064098 Washc2Q6PGL7 1334 aa17.11■□□□□ 0.33
Ldb3-204ENSMUST00000064098 RictorQ6QI06 1708 aa17.11■□□□□ 0.33
Ldb3-204ENSMUST00000064098 Iqgap3F8VQ29 1632 aa17.11■□□□□ 0.33
Ldb3-204ENSMUST00000064098 Knl1Q66JQ7 1612 aa17.1■□□□□ 0.33
Ldb3-204ENSMUST00000064098 Sall2Q9QX96 1004 aa17.09■□□□□ 0.33
Ldb3-204ENSMUST00000064098 Tecpr2Q3UH45 1423 aa17.08■□□□□ 0.33
Ldb3-204ENSMUST00000064098 Gm13697A2AK42 830 aa17.08■□□□□ 0.33
Ldb3-204ENSMUST00000064098 Akap12Q9WTQ5 1684 aa17.08■□□□□ 0.32
Ldb3-204ENSMUST00000064098 ErbinQ80TH2 1402 aa17.08■□□□□ 0.32
Ldb3-204ENSMUST00000064098 Neurod1Q60867 357 aa17.08■□□□□ 0.32
Ldb3-204ENSMUST00000064098 Mroh3A0A1D5RM54 893 aa17.07■□□□□ 0.32
Ldb3-204ENSMUST00000064098 Ino80Q6ZPV2 1559 aa17.06■□□□□ 0.32
Ldb3-204ENSMUST00000064098 Skint5A7XUY5 1461 aa17.06■□□□□ 0.32
Ldb3-204ENSMUST00000064098 MyclP10166 368 aa17.06■□□□□ 0.32
Ldb3-204ENSMUST00000064098 Ppargc1bQ8VHJ7 1014 aa17.05■□□□□ 0.32
Ldb3-204ENSMUST00000064098 Med14A2ABV5 1459 aaKnown RBP17.05■□□□□ 0.32
Ldb3-204ENSMUST00000064098 AatkQ80YE4 1365 aa17.05■□□□□ 0.32
Ldb3-204ENSMUST00000064098 Wdr66E9Q743 1299 aa17.04■□□□□ 0.32
Ldb3-204ENSMUST00000064098 Abca8aQ8K442 1620 aa17.02■□□□□ 0.32
Ldb3-204ENSMUST00000064098 Grwd1Q810D6 446 aaKnown RBP17.02■□□□□ 0.32
Ldb3-204ENSMUST00000064098 Efcab6Q6P1E8 1516 aa17.01■□□□□ 0.31
Ldb3-204ENSMUST00000064098 Adgrb3Q80ZF8 1522 aa17.01■□□□□ 0.31
Ldb3-204ENSMUST00000064098 Ercc6l2Q9JIM3 1537 aa17.01■□□□□ 0.31
Ldb3-204ENSMUST00000064098 Ahdc1Q6PAL7 1594 aaKnown RBP17.01■□□□□ 0.31
Ldb3-204ENSMUST00000064098 Abcc6Q9R1S7 1498 aa17■□□□□ 0.31
Ldb3-204ENSMUST00000064098 Prdm2A2A7B5 1709 aaKnown RBP16.98■□□□□ 0.31
Ldb3-204ENSMUST00000064098 Adamts13Q769J6 1426 aa16.98■□□□□ 0.31
Ldb3-204ENSMUST00000064098 Ifit1bl1D3Z6F0 470 aa16.98■□□□□ 0.31
Ldb3-204ENSMUST00000064098 Dip2bQ3UH60 1574 aa16.97■□□□□ 0.31
Ldb3-204ENSMUST00000064098 Uggt1Q6P5E4 1551 aa16.97■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 8.8 ms