RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Tpm3-rs7D3Z2H9 248 aa21.59■■□□□ 1.05
Usp48-201ENSMUST00000055131 Synj1Q8CHC4 1574 aa21.58■■□□□ 1.05
Usp48-201ENSMUST00000055131 Ccnb3Q810T2 1396 aa21.58■■□□□ 1.05
Usp48-201ENSMUST00000055131 CenpjQ569L8 1344 aa21.57■■□□□ 1.04
Usp48-201ENSMUST00000055131 Sart1Q9Z315 806 aaKnown RBP21.56■■□□□ 1.04
Usp48-201ENSMUST00000055131 Mical1Q8VDP3 1048 aa21.55■■□□□ 1.04
Usp48-201ENSMUST00000055131 Rapgef2Q8CHG7 1496 aa21.55■■□□□ 1.04
Usp48-201ENSMUST00000055131 Gpatch11Q3UFS4 262 aa21.55■■□□□ 1.04
Usp48-201ENSMUST00000055131 Utp14aQ640M1 767 aaKnown RBP21.54■■□□□ 1.04
Usp48-201ENSMUST00000055131 Usp47Q8BY87 1376 aa21.54■■□□□ 1.04
Usp48-201ENSMUST00000055131 Slc4a10Q5DTL9 1118 aa21.54■■□□□ 1.04
Usp48-201ENSMUST00000055131 RdxP26043 583 aaKnown RBP21.53■■□□□ 1.04
Usp48-201ENSMUST00000055131 Kiaa0754Q69ZZ9 979 aa21.53■■□□□ 1.04
Usp48-201ENSMUST00000055131 Rrp12Q6P5B0 1295 aaKnown RBP21.53■■□□□ 1.04
Usp48-201ENSMUST00000055131 Inpp5dQ9ES52 1191 aa21.53■■□□□ 1.04
Usp48-201ENSMUST00000055131 Cald1E9QA15 768 aaKnown RBP21.52■■□□□ 1.04
Usp48-201ENSMUST00000055131 Smg6P61406 1418 aaKnown RBP21.52■■□□□ 1.04
Usp48-201ENSMUST00000055131 Ccdc60Q8C4J0 545 aa21.51■■□□□ 1.03
Usp48-201ENSMUST00000055131 Carmil1Q6EDY6 1374 aa21.5■■□□□ 1.03
Usp48-201ENSMUST00000055131 Dnai2A2AC93 623 aa21.5■■□□□ 1.03
Usp48-201ENSMUST00000055131 HdgfP51859 237 aaKnown RBP21.5■■□□□ 1.03
Usp48-201ENSMUST00000055131 Ylpm1Q9R0I7 1386 aaKnown RBP21.49■■□□□ 1.03
Usp48-201ENSMUST00000055131 Stard8Q8K031 1019 aa21.48■■□□□ 1.03
Usp48-201ENSMUST00000055131 Atp6v1dP57746 247 aa21.48■■□□□ 1.03
Usp48-201ENSMUST00000055131 Stk31Q99MW1 1018 aa21.48■■□□□ 1.03
Usp48-201ENSMUST00000055131 Ccer1Q9CQL2 403 aa21.46■■□□□ 1.03
Usp48-201ENSMUST00000055131 Smarca4Q3TKT4 1613 aaKnown RBP21.46■■□□□ 1.03
Usp48-201ENSMUST00000055131 Ap3b2Q9JME5 1082 aa21.45■■□□□ 1.02
Usp48-201ENSMUST00000055131 LrpprcQ6PB66 1392 aaKnown RBP21.45■■□□□ 1.02
Usp48-201ENSMUST00000055131 Cgnl1Q6AW69 1298 aa21.44■■□□□ 1.02
Usp48-201ENSMUST00000055131 Pabpn1Q8CCS6 302 aaKnown RBP21.44■■□□□ 1.02
Usp48-201ENSMUST00000055131 Dhx29Q6PGC1 1365 aaKnown RBP21.44■■□□□ 1.02
Usp48-201ENSMUST00000055131 Pak3Q61036 559 aa21.44■■□□□ 1.02
Usp48-201ENSMUST00000055131 Usp40Q8BWR4 1235 aa21.43■■□□□ 1.02
Usp48-201ENSMUST00000055131 Cabp4Q8VHC5 271 aa21.43■■□□□ 1.02
Usp48-201ENSMUST00000055131 Cc2d1aQ8K1A6 943 aa21.43■■□□□ 1.02
Usp48-201ENSMUST00000055131 Rsph3aQ3UFY4 516 aa21.42■■□□□ 1.02
Usp48-201ENSMUST00000055131 Kif7B7ZNG0 1348 aa21.42■■□□□ 1.02
Usp48-201ENSMUST00000055131 UacaQ8CGB3 1411 aa21.42■■□□□ 1.02
Usp48-201ENSMUST00000055131 Trim30aP15533 496 aa21.41■■□□□ 1.02
Usp48-201ENSMUST00000055131 GsdmaQ9EST1 446 aa21.41■■□□□ 1.02
Usp48-201ENSMUST00000055131 Tpd52l1O54818 204 aa21.41■■□□□ 1.02
Usp48-201ENSMUST00000055131 Rock1P70335 1354 aa21.41■■□□□ 1.02
Usp48-201ENSMUST00000055131 G3bp1P97855 465 aaKnown RBP21.4■■□□□ 1.02
Usp48-201ENSMUST00000055131 Sf3a1Q8K4Z5 791 aaKnown RBP21.4■■□□□ 1.02
Usp48-201ENSMUST00000055131 Taok2Q6ZQ29 1240 aa21.4■■□□□ 1.02
Usp48-201ENSMUST00000055131 Shq1Q7TMX5 569 aa21.38■■□□□ 1.01
Usp48-201ENSMUST00000055131 Crybg2B7ZCC2 1516 aa21.38■■□□□ 1.01
Usp48-201ENSMUST00000055131 Smarca2Q6DIC0 1577 aa21.38■■□□□ 1.01
Usp48-201ENSMUST00000055131 Esx1O88933 382 aa21.38■■□□□ 1.01
Usp48-201ENSMUST00000055131 Fam184bQ0KK56 942 aa21.38■■□□□ 1.01
Usp48-201ENSMUST00000055131 Ddrgk1Q80WW9 315 aa21.37■■□□□ 1.01
Usp48-201ENSMUST00000055131 Becn1O88597 448 aa21.37■■□□□ 1.01
Usp48-201ENSMUST00000055131 AppP12023 770 aa21.37■■□□□ 1.01
Usp48-201ENSMUST00000055131 Mink1Q9JM52 1308 aa21.36■■□□□ 1.01
Usp48-201ENSMUST00000055131 Rfx1P48377 963 aa21.36■■□□□ 1.01
Usp48-201ENSMUST00000055131 Cspp1B2RX88 1205 aa21.35■■□□□ 1.01
Usp48-201ENSMUST00000055131 St18Q80TY4 1045 aa21.35■■□□□ 1.01
Usp48-201ENSMUST00000055131 Filip1lQ6P6L0 1131 aa21.34■■□□□ 1.01
Usp48-201ENSMUST00000055131 VgfQ0VGU4 617 aa21.33■■□□□ 1.01
Usp48-201ENSMUST00000055131 Isy1Q69ZQ2 285 aaKnown RBP21.33■■□□□ 1.01
Usp48-201ENSMUST00000055131 Ccdc47Q9D024 483 aaKnown RBP21.33■■□□□ 1
Usp48-201ENSMUST00000055131 Tpm3P21107 285 aaKnown RBP21.33■■□□□ 1
Usp48-201ENSMUST00000055131 Rsph4aQ8BYM7 716 aa21.32■■□□□ 1
Usp48-201ENSMUST00000055131 Triml2E9PW10 424 aa21.31■■□□□ 1
Usp48-201ENSMUST00000055131 Casq1O09165 405 aa21.31■■□□□ 1
Usp48-201ENSMUST00000055131 Eif2s2Q99L45 331 aaKnown RBP21.31■■□□□ 1
Usp48-201ENSMUST00000055131 Nap1l3Q794H2 544 aa21.3■■□□□ 1
Usp48-201ENSMUST00000055131 WrnO09053 1401 aa21.3■■□□□ 1
Usp48-201ENSMUST00000055131 Dapk1Q80YE7 1442 aa21.3■■□□□ 1
Usp48-201ENSMUST00000055131 Ak7Q9D2H2 614 aa21.3■■□□□ 1
Usp48-201ENSMUST00000055131 Zscan10Q3URR7 782 aa21.3■■□□□ 1
Usp48-201ENSMUST00000055131 Mre11Q61216 706 aa21.29■■□□□ 1
Usp48-201ENSMUST00000055131 Vps53Q8CCB4 832 aa21.29■■□□□ 1
Usp48-201ENSMUST00000055131 Gtf3c3Q3TMP1 882 aa21.28■■□□□ 1
Usp48-201ENSMUST00000055131 Iqgap2Q3UQ44 1575 aa21.28■■□□□ 1
Usp48-201ENSMUST00000055131 BccipQ9CWI3 316 aa21.28■■□□□ 1
Usp48-201ENSMUST00000055131 Ubap1lG3UW59 384 aa21.27■■□□□ 1
Usp48-201ENSMUST00000055131 SetQ9EQU5 289 aaKnown RBP21.27■□□□□ 0.99
Usp48-201ENSMUST00000055131 Ralbp1Q62172 648 aa21.26■□□□□ 0.99
Usp48-201ENSMUST00000055131 4933402E13RikQ9D4D2 429 aa21.26■□□□□ 0.99
Usp48-201ENSMUST00000055131 Soga1E1U8D0 1418 aa21.25■□□□□ 0.99
Usp48-201ENSMUST00000055131 Sh3bgrQ9WUZ7 214 aa21.24■□□□□ 0.99
Usp48-201ENSMUST00000055131 Chmp4cQ9D7F7 232 aa21.24■□□□□ 0.99
Usp48-201ENSMUST00000055131 Ush1cQ9ES64 910 aa21.24■□□□□ 0.99
Usp48-201ENSMUST00000055131 Gm21969J3QJZ1 289 aa21.24■□□□□ 0.99
Usp48-201ENSMUST00000055131 Polr3gQ6NXY9 223 aa21.24■□□□□ 0.99
Usp48-201ENSMUST00000055131 Utp3Q9JI13 469 aaKnown RBP21.24■□□□□ 0.99
Usp48-201ENSMUST00000055131 Tceal9Q9DD24 104 aa21.23■□□□□ 0.99
Usp48-201ENSMUST00000055131 Trim58Q5NCC9 485 aa21.23■□□□□ 0.99
Usp48-201ENSMUST00000055131 Gm21190A0A0G2JGJ6 266 aa21.22■□□□□ 0.99
Usp48-201ENSMUST00000055131 Cc2d2bA0A286YDU8 1405 aa21.22■□□□□ 0.99
Usp48-201ENSMUST00000055131 Phactr2B1AVP0 632 aa21.22■□□□□ 0.99
Usp48-201ENSMUST00000055131 Tomm22Q9CPQ3 142 aa21.21■□□□□ 0.99
Usp48-201ENSMUST00000055131 Smc4Q8CG47 1286 aa21.21■□□□□ 0.99
Usp48-201ENSMUST00000055131 Usp16Q99LG0 825 aa21.2■□□□□ 0.98
Usp48-201ENSMUST00000055131 Rpgrip1lQ8CG73 1264 aa21.2■□□□□ 0.98
Usp48-201ENSMUST00000055131 Cttnbp2B9EJA2 1648 aa21.2■□□□□ 0.98
Usp48-201ENSMUST00000055131 Kri1Q8VDQ9 704 aaKnown RBP21.2■□□□□ 0.98
Usp48-201ENSMUST00000055131 KinQ8K339 391 aa21.2■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms