RNA–Protein interactions for RNA: ENSMUST00000054588.14

Col9a1-201, Transcript of Collagen alpha-1(IX) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col9a1, Length 3,834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-201ENSMUST00000054588 Gm20521D3Z5F7 333 aa14.36□□□□□ -0.11
Col9a1-201ENSMUST00000054588 Neurod2Q62414 383 aa14.36□□□□□ -0.11
Col9a1-201ENSMUST00000054588 Mbd5B1AYB6 1498 aa14.35□□□□□ -0.11
Col9a1-201ENSMUST00000054588 Ccdc141E9Q8Q6 1531 aa14.35□□□□□ -0.11
Col9a1-201ENSMUST00000054588 Naip6Q9JIB6 1403 aa14.34□□□□□ -0.11
Col9a1-201ENSMUST00000054588 Caskin1Q6P9K8 1431 aa14.34□□□□□ -0.11
Col9a1-201ENSMUST00000054588 Map3k4O08648 1597 aa14.33□□□□□ -0.11
Col9a1-201ENSMUST00000054588 Kif3bQ61771 747 aa14.33□□□□□ -0.12
Col9a1-201ENSMUST00000054588 Mug2P28666 1451 aa14.33□□□□□ -0.12
Col9a1-201ENSMUST00000054588 Jph4Q80WT0 628 aa14.32□□□□□ -0.12
Col9a1-201ENSMUST00000054588 Myom3A2ABU4 1439 aa14.32□□□□□ -0.12
Col9a1-201ENSMUST00000054588 Mapkbp1Q6NS57 1503 aa14.32□□□□□ -0.12
Col9a1-201ENSMUST00000054588 Upf2A2AT37 1269 aaKnown RBP14.32□□□□□ -0.12
Col9a1-201ENSMUST00000054588 Wdr7Q920I9 1489 aa14.3□□□□□ -0.12
Col9a1-201ENSMUST00000054588 Srpk2O54781 681 aaKnown RBP14.29□□□□□ -0.12
Col9a1-201ENSMUST00000054588 RalgapbQ8BQZ4 1484 aa14.29□□□□□ -0.12
Col9a1-201ENSMUST00000054588 Stk26Q99JT2 416 aa14.28□□□□□ -0.12
Col9a1-201ENSMUST00000054588 Kif14L0N7N1 1674 aaKnown RBP14.28□□□□□ -0.12
Col9a1-201ENSMUST00000054588 Setd1bQ8CFT2 1985 aa14.28□□□□□ -0.12
Col9a1-201ENSMUST00000054588 Abcc2Q8VI47 1543 aa14.28□□□□□ -0.12
Col9a1-201ENSMUST00000054588 Cpsf1Q9EPU4 1441 aaKnown RBP14.28□□□□□ -0.12
Col9a1-201ENSMUST00000054588 DiexfQ8BTT6 772 aaKnown RBP14.28□□□□□ -0.12
Col9a1-201ENSMUST00000054588 Senp3Q9EP97 568 aaKnown RBP14.28□□□□□ -0.12
Col9a1-201ENSMUST00000054588 Polr3aB2RXC6 1390 aa14.26□□□□□ -0.13
Col9a1-201ENSMUST00000054588 Asxl1P59598 1514 aa14.26□□□□□ -0.13
Col9a1-201ENSMUST00000054588 Hdac5Q9Z2V6 1113 aa14.26□□□□□ -0.13
Col9a1-201ENSMUST00000054588 Prex2Q3LAC4 1598 aa14.26□□□□□ -0.13
Col9a1-201ENSMUST00000054588 Trpm2Q91YD4 1506 aa14.25□□□□□ -0.13
Col9a1-201ENSMUST00000054588 Tcerg1Q8CGF7 1100 aaKnown RBP14.25□□□□□ -0.13
Col9a1-201ENSMUST00000054588 Supt6hQ62383 1726 aaKnown RBP14.25□□□□□ -0.13
Col9a1-201ENSMUST00000054588 Rock1P70335 1354 aa14.24□□□□□ -0.13
Col9a1-201ENSMUST00000054588 Zscan21Q07231 555 aa14.23□□□□□ -0.13
Col9a1-201ENSMUST00000054588 Ppp1r18Q8BQ30 594 aa14.23□□□□□ -0.13
Col9a1-201ENSMUST00000054588 Fmn2Q9JL04 1578 aa14.23□□□□□ -0.13
Col9a1-201ENSMUST00000054588 Map3k5O35099 1380 aa14.22□□□□□ -0.13
Col9a1-201ENSMUST00000054588 Adgrl2Q8JZZ7 1487 aa14.21□□□□□ -0.13
Col9a1-201ENSMUST00000054588 Bcl11aQ9QYE3 773 aa14.21□□□□□ -0.13
Col9a1-201ENSMUST00000054588 Cdk13Q69ZA1 1511 aaKnown RBP14.21□□□□□ -0.13
Col9a1-201ENSMUST00000054588 Fan1Q69ZT1 1020 aa14.21□□□□□ -0.13
Col9a1-201ENSMUST00000054588 Dbr1Q923B1 550 aa14.21□□□□□ -0.13
Col9a1-201ENSMUST00000054588 Lemd3Q9WU40 921 aa14.21□□□□□ -0.14
Col9a1-201ENSMUST00000054588 Mak16Q8BGS0 296 aaKnown RBP14.2□□□□□ -0.14
Col9a1-201ENSMUST00000054588 Stag3O70576 1240 aa14.2□□□□□ -0.14
Col9a1-201ENSMUST00000054588 NgefQ8CHT1 710 aa14.2□□□□□ -0.14
Col9a1-201ENSMUST00000054588 Mroh2aD3Z750 1679 aa14.19□□□□□ -0.14
Col9a1-201ENSMUST00000054588 PtprgQ05909 1442 aa14.19□□□□□ -0.14
Col9a1-201ENSMUST00000054588 L3mbtl2P59178 703 aa14.19□□□□□ -0.14
Col9a1-201ENSMUST00000054588 Slc4a1apE9PX68 744 aa14.19□□□□□ -0.14
Col9a1-201ENSMUST00000054588 Safb2Q80YR5 991 aaKnown RBP14.19□□□□□ -0.14
Col9a1-201ENSMUST00000054588 Liat1Q810M6 228 aa14.18□□□□□ -0.14
Col9a1-201ENSMUST00000054588 Plin1Q8CGN5 517 aa14.18□□□□□ -0.14
Col9a1-201ENSMUST00000054588 Fancd2Q80V62 1450 aa14.17□□□□□ -0.14
Col9a1-201ENSMUST00000054588 Lrrc9Q8CDN9 1456 aa14.17□□□□□ -0.14
Col9a1-201ENSMUST00000054588 4933416C03RikQ3V063 378 aa14.17□□□□□ -0.14
Col9a1-201ENSMUST00000054588 Znf316Q6PGE4 1016 aa14.17□□□□□ -0.14
Col9a1-201ENSMUST00000054588 Inpp5dQ9ES52 1191 aa14.17□□□□□ -0.14
Col9a1-201ENSMUST00000054588 Pak3Q61036 559 aa14.16□□□□□ -0.14
Col9a1-201ENSMUST00000054588 Exosc9Q9JHI7 438 aaKnown RBP14.16□□□□□ -0.14
Col9a1-201ENSMUST00000054588 Arid4bA2CG63 1314 aaKnown RBP14.16□□□□□ -0.14
Col9a1-201ENSMUST00000054588 B4galnt3Q6L8S8 986 aa14.16□□□□□ -0.14
Col9a1-201ENSMUST00000054588 Rpgrip1lQ8CG73 1264 aa14.16□□□□□ -0.14
Col9a1-201ENSMUST00000054588 Armcx1Q9CX83 456 aa14.16□□□□□ -0.14
Col9a1-201ENSMUST00000054588 Kank1E9Q238 1360 aa14.16□□□□□ -0.14
Col9a1-201ENSMUST00000054588 Cd109Q8R422 1442 aa14.16□□□□□ -0.14
Col9a1-201ENSMUST00000054588 Irx6Q9ER75 438 aa14.16□□□□□ -0.14
Col9a1-201ENSMUST00000054588 Amer1Q7TS75 1132 aa14.15□□□□□ -0.14
Col9a1-201ENSMUST00000054588 CrbnQ8C7D2 445 aa14.15□□□□□ -0.14
Col9a1-201ENSMUST00000054588 Pank3Q8R2W9 370 aa14.15□□□□□ -0.14
Col9a1-201ENSMUST00000054588 Ipo9Q91YE6 1041 aa14.15□□□□□ -0.14
Col9a1-201ENSMUST00000054588 Dot1lQ6XZL8 1540 aa14.14□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Dcaf11Q91VU6 549 aa14.14□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Spag9Q58A65 1321 aaKnown RBP14.14□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Neo1P97798 1493 aa14.14□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Rrbp1Q99PL5 1605 aaKnown RBP14.14□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Arhgap5P97393 1501 aa14.14□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Ccdc27Q3V036 639 aa14.13□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Srcin1Q9QWI6 1250 aa14.13□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Gapvd1Q6PAR5 1458 aa14.13□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Zmym4A2A791 1549 aaKnown RBP14.12□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Ssh2Q5SW75 1423 aa14.12□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Iqgap1Q9JKF1 1657 aaKnown RBP14.12□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Mink1Q9JM52 1308 aa14.11□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Zfp444Q3TDV8 331 aaKnown RBP14.1□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Mbd3Q9Z2D8 285 aaKnown RBP14.1□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Lrriq1Q0P5X1 1673 aa14.1□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Setd1aE9PYH6 1716 aa14.1□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Prkrip1Q9CWV6 186 aaKnown RBP14.09□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Gtf2e1Q9D0D5 440 aa14.09□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Atp7aQ64430 1491 aa14.09□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Ppip5k1A2ARP1 1436 aa14.09□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Rusc2Q80U22 1514 aa14.09□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Tmf1B9EKI3 1091 aa14.09□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Q7TT23 1179 aa14.09□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Dnmt1P13864 1620 aaKnown RBP14.08□□□□□ -0.15
Col9a1-201ENSMUST00000054588 IqubQ8CDK3 788 aa14.08□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Eif4g3Q80XI3 1579 aaKnown RBP14.08□□□□□ -0.15
Col9a1-201ENSMUST00000054588 Prdm16A2A935 1275 aa14.08□□□□□ -0.16
Col9a1-201ENSMUST00000054588 Fam208aQ69ZR9 1610 aaKnown RBP14.08□□□□□ -0.16
Col9a1-201ENSMUST00000054588 Pde4cQ3UEI1 686 aa14.08□□□□□ -0.16
Col9a1-201ENSMUST00000054588 Kdm5cP41230 1554 aa14.07□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms