RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Ttll5Q8CHB8 1328 aa15.3■□□□□ 0.04
Pcif1-201ENSMUST00000041643 Mink1Q9JM52 1308 aa15.3■□□□□ 0.04
Pcif1-201ENSMUST00000041643 Il16O54824 1322 aa15.3■□□□□ 0.04
Pcif1-201ENSMUST00000041643 Inpp5dQ9ES52 1191 aa15.3■□□□□ 0.04
Pcif1-201ENSMUST00000041643 A2mQ6GQT1 1474 aa15.29■□□□□ 0.04
Pcif1-201ENSMUST00000041643 Ggt6Q6PDE7 497 aa15.29■□□□□ 0.04
Pcif1-201ENSMUST00000041643 Chmp4bQ9D8B3 224 aaKnown RBP15.29■□□□□ 0.04
Pcif1-201ENSMUST00000041643 Ap3b2Q9JME5 1082 aa15.29■□□□□ 0.04
Pcif1-201ENSMUST00000041643 Kif21aQ9QXL2 1672 aa15.28■□□□□ 0.04
Pcif1-201ENSMUST00000041643 Dbr1Q923B1 550 aa15.28■□□□□ 0.04
Pcif1-201ENSMUST00000041643 Rtn4Q99P72 1162 aaKnown RBP15.28■□□□□ 0.04
Pcif1-201ENSMUST00000041643 CrbnQ8C7D2 445 aa15.27■□□□□ 0.03
Pcif1-201ENSMUST00000041643 Smg6P61406 1418 aaKnown RBP15.27■□□□□ 0.03
Pcif1-201ENSMUST00000041643 Igf1rQ60751 1373 aa15.25■□□□□ 0.03
Pcif1-201ENSMUST00000041643 Fam184bQ0KK56 942 aa15.25■□□□□ 0.03
Pcif1-201ENSMUST00000041643 Slx4Q6P1D7 1565 aa15.25■□□□□ 0.03
Pcif1-201ENSMUST00000041643 Mbd3Q9Z2D8 285 aaKnown RBP15.24■□□□□ 0.03
Pcif1-201ENSMUST00000041643 Kif7B7ZNG0 1348 aa15.22■□□□□ 0.03
Pcif1-201ENSMUST00000041643 WizO88286 1684 aaKnown RBP15.22■□□□□ 0.03
Pcif1-201ENSMUST00000041643 Dhx9O70133 1380 aaKnown RBP15.22■□□□□ 0.03
Pcif1-201ENSMUST00000041643 CanxP35564 591 aaKnown RBP15.22■□□□□ 0.03
Pcif1-201ENSMUST00000041643 Gpatch8A2A6A1 1505 aa15.21■□□□□ 0.03
Pcif1-201ENSMUST00000041643 Naip2Q9QUK4 1447 aa15.21■□□□□ 0.03
Pcif1-201ENSMUST00000041643 Puf60Q3UEB3 564 aaKnown RBP15.21■□□□□ 0.03
Pcif1-201ENSMUST00000041643 Thoc2B1AZI6 1594 aaKnown RBP15.21■□□□□ 0.03
Pcif1-201ENSMUST00000041643 B4galnt3Q6L8S8 986 aa15.21■□□□□ 0.03
Pcif1-201ENSMUST00000041643 Tnnt1O88346 262 aa15.21■□□□□ 0.02
Pcif1-201ENSMUST00000041643 Senp3Q9EP97 568 aaKnown RBP15.21■□□□□ 0.02
Pcif1-201ENSMUST00000041643 Tsen2Q6P7W5 460 aa15.2■□□□□ 0.02
Pcif1-201ENSMUST00000041643 HdgfP51859 237 aaKnown RBP15.19■□□□□ 0.02
Pcif1-201ENSMUST00000041643 SafbD3YXK2 937 aaKnown RBP15.19■□□□□ 0.02
Pcif1-201ENSMUST00000041643 Map7O88735 730 aa15.19■□□□□ 0.02
Pcif1-201ENSMUST00000041643 Zscan10Q3URR7 782 aa15.19■□□□□ 0.02
Pcif1-201ENSMUST00000041643 Q9D9H8 365 aa15.19■□□□□ 0.02
Pcif1-201ENSMUST00000041643 Samd9lQ69Z37 1561 aa15.18■□□□□ 0.02
Pcif1-201ENSMUST00000041643 Tmco5bQ80X59 307 aa15.18■□□□□ 0.02
Pcif1-201ENSMUST00000041643 Abcc5Q9R1X5 1436 aa15.18■□□□□ 0.02
Pcif1-201ENSMUST00000041643 Q3TQI7 289 aaKnown RBP15.18■□□□□ 0.02
Pcif1-201ENSMUST00000041643 Afap1Q80YS6 731 aa15.18■□□□□ 0.02
Pcif1-201ENSMUST00000041643 Disp1Q3TDN0 1521 aa15.17■□□□□ 0.02
Pcif1-201ENSMUST00000041643 Myom3A2ABU4 1439 aa15.17■□□□□ 0.02
Pcif1-201ENSMUST00000041643 DekQ7TNV0 380 aaKnown RBP15.17■□□□□ 0.02
Pcif1-201ENSMUST00000041643 Cabp4Q8VHC5 271 aa15.17■□□□□ 0.02
Pcif1-201ENSMUST00000041643 Caskin1Q6P9K8 1431 aa15.16■□□□□ 0.02
Pcif1-201ENSMUST00000041643 Slc4a3P16283 1227 aa15.15■□□□□ 0.02
Pcif1-201ENSMUST00000041643 Ksr2Q3UVC0 959 aa15.15■□□□□ 0.02
Pcif1-201ENSMUST00000041643 Pla2r1Q62028 1487 aa15.15■□□□□ 0.02
Pcif1-201ENSMUST00000041643 Gsto1O09131 240 aa15.15■□□□□ 0.02
Pcif1-201ENSMUST00000041643 Mlh3A0A1Y7VMP7 1443 aa15.14■□□□□ 0.01
Pcif1-201ENSMUST00000041643 Atp10dQ8K2X1 1416 aa15.14■□□□□ 0.01
Pcif1-201ENSMUST00000041643 Znf330Q922H9 316 aa15.14■□□□□ 0.01
Pcif1-201ENSMUST00000041643 Rock1P70335 1354 aa15.14■□□□□ 0.01
Pcif1-201ENSMUST00000041643 GsdmaQ9EST1 446 aa15.13■□□□□ 0.01
Pcif1-201ENSMUST00000041643 Tcerg1Q8CGF7 1100 aaKnown RBP15.13■□□□□ 0.01
Pcif1-201ENSMUST00000041643 Ccar1Q8CH18 1146 aaKnown RBP15.13■□□□□ 0.01
Pcif1-201ENSMUST00000041643 HnrnpuQ8VEK3 800 aaKnown RBP15.13■□□□□ 0.01
Pcif1-201ENSMUST00000041643 Vsig10D3YX43 558 aa15.12■□□□□ 0.01
Pcif1-201ENSMUST00000041643 Fancd2Q80V62 1450 aa15.12■□□□□ 0.01
Pcif1-201ENSMUST00000041643 Eif4g1Q6NZJ6 1600 aaKnown RBP15.12■□□□□ 0.01
Pcif1-201ENSMUST00000041643 Pibf1E9Q6K3 756 aa15.12■□□□□ 0.01
Pcif1-201ENSMUST00000041643 PxdnQ3UQ28 1475 aa15.11■□□□□ 0.01
Pcif1-201ENSMUST00000041643 Stk31Q99MW1 1018 aa15.11■□□□□ 0.01
Pcif1-201ENSMUST00000041643 1700123L14RikQ3V2K7 440 aa15.11■□□□□ 0.01
Pcif1-201ENSMUST00000041643 Atp2b2Q9R0K7 1198 aa15.11■□□□□ 0.01
Pcif1-201ENSMUST00000041643 4930567H17RikQ3V0K5 233 aa15.1■□□□□ 0.01
Pcif1-201ENSMUST00000041643 BC005561E9Q5E2 1589 aa15.1■□□□□ 0.01
Pcif1-201ENSMUST00000041643 Pak3Q61036 559 aa15.09■□□□□ 0.01
Pcif1-201ENSMUST00000041643 Pip4k2bQ80XI4 416 aa15.09■□□□□ 0.01
Pcif1-201ENSMUST00000041643 Gm21190A0A0G2JGJ6 266 aa15.09■□□□□ 0.01
Pcif1-201ENSMUST00000041643 Ncoa3O09000 1398 aa15.09■□□□□ 0.01
Pcif1-201ENSMUST00000041643 Hsp90aa1P07901 733 aaKnown RBP15.09■□□□□ 0.01
Pcif1-201ENSMUST00000041643 Rapgef6Q5NCJ1 1609 aa15.09■□□□□ 0.01
Pcif1-201ENSMUST00000041643 Fam71e1A1L3C1 212 aa15.08■□□□□ 0.01
Pcif1-201ENSMUST00000041643 Hsp90b1P08113 802 aaKnown RBP15.08■□□□□ 0
Pcif1-201ENSMUST00000041643 KnstrnQ9D9Z1 312 aaKnown RBP15.08■□□□□ 0
Pcif1-201ENSMUST00000041643 Rfx7F8VPJ6 1459 aa15.08■□□□□ 0
Pcif1-201ENSMUST00000041643 Q8BT18 775 aa15.08■□□□□ 0
Pcif1-201ENSMUST00000041643 Supt16hQ920B9 1047 aa15.07■□□□□ 0
Pcif1-201ENSMUST00000041643 OvosQ3UU35 1456 aa15.07■□□□□ 0
Pcif1-201ENSMUST00000041643 Fyb1O35601 819 aa15.07■□□□□ 0
Pcif1-201ENSMUST00000041643 Sart3Q9JLI8 962 aaKnown RBP15.06■□□□□ 0
Pcif1-201ENSMUST00000041643 Ythdc1E9Q5K9 736 aaKnown RBP15.05■□□□□ 0
Pcif1-201ENSMUST00000041643 FanciQ8K368 1330 aa15.05■□□□□ -0
Pcif1-201ENSMUST00000041643 Cluap1Q8R3P7 413 aa15.05■□□□□ -0
Pcif1-201ENSMUST00000041643 Esx1O88933 382 aa15.04■□□□□ -0
Pcif1-201ENSMUST00000041643 Rpgrip1lQ8CG73 1264 aa15.04■□□□□ -0
Pcif1-201ENSMUST00000041643 AI481877A2ALV5 1481 aa15.03■□□□□ -0
Pcif1-201ENSMUST00000041643 Ppm1gQ61074 542 aa15.03■□□□□ -0
Pcif1-201ENSMUST00000041643 Ttc21bQ0HA38 1315 aa15.03■□□□□ -0
Pcif1-201ENSMUST00000041643 Gm1043A0A140LJC2 1431 aa15.02■□□□□ -0
Pcif1-201ENSMUST00000041643 Eif4g2Q62448 906 aaKnown RBP15.02■□□□□ -0
Pcif1-201ENSMUST00000041643 Chmp5Q9D7S9 219 aa15.02■□□□□ -0
Pcif1-201ENSMUST00000041643 Mapkbp1Q6NS57 1503 aa15.02■□□□□ -0
Pcif1-201ENSMUST00000041643 Ythdc2B2RR83 1445 aaKnown RBP15.02□□□□□ -0.01
Pcif1-201ENSMUST00000041643 Prex2Q3LAC4 1598 aa15.02□□□□□ -0.01
Pcif1-201ENSMUST00000041643 Shroom2A2ALU4 1481 aa15.02□□□□□ -0.01
Pcif1-201ENSMUST00000041643 Atf3Q60765 181 aa15□□□□□ -0.01
Pcif1-201ENSMUST00000041643 EspnQ9ET47 871 aa15□□□□□ -0.01
Pcif1-201ENSMUST00000041643 Rab11fip3Q8CHD8 1047 aa15□□□□□ -0.01
Pcif1-201ENSMUST00000041643 Ccdc60Q8C4J0 545 aa14.99□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms