RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Zbtb7cQ8VCZ7 619 aa17.34■□□□□ 0.37
Ccdc28b-201ENSMUST00000030586 Trpm2Q91YD4 1506 aa17.33■□□□□ 0.37
Ccdc28b-201ENSMUST00000030586 Vps8Q0P5W1 1427 aa17.33■□□□□ 0.36
Ccdc28b-201ENSMUST00000030586 Usp54Q8BL06 1588 aaKnown RBP17.32■□□□□ 0.36
Ccdc28b-201ENSMUST00000030586 Ehmt2Q9Z148 1263 aaKnown RBP17.32■□□□□ 0.36
Ccdc28b-201ENSMUST00000030586 Abca6Q8K441 1624 aa17.32■□□□□ 0.36
Ccdc28b-201ENSMUST00000030586 UacaQ8CGB3 1411 aa17.31■□□□□ 0.36
Ccdc28b-201ENSMUST00000030586 Plch2A2AP18 1501 aa17.31■□□□□ 0.36
Ccdc28b-201ENSMUST00000030586 4930407I10RikD3Z5T8 1512 aa17.31■□□□□ 0.36
Ccdc28b-201ENSMUST00000030586 Abca17E9PX95 1733 aa17.3■□□□□ 0.36
Ccdc28b-201ENSMUST00000030586 Ercc6l2Q9JIM3 1537 aa17.29■□□□□ 0.36
Ccdc28b-201ENSMUST00000030586 Rfx7F8VPJ6 1459 aa17.29■□□□□ 0.36
Ccdc28b-201ENSMUST00000030586 Arhgap23Q69ZH9 1483 aa17.29■□□□□ 0.36
Ccdc28b-201ENSMUST00000030586 Zfp644E9QA22 1323 aa17.28■□□□□ 0.36
Ccdc28b-201ENSMUST00000030586 Pde4cQ3UEI1 686 aa17.28■□□□□ 0.36
Ccdc28b-201ENSMUST00000030586 Dip2bQ3UH60 1574 aa17.28■□□□□ 0.36
Ccdc28b-201ENSMUST00000030586 Knl1Q66JQ7 1612 aa17.27■□□□□ 0.36
Ccdc28b-201ENSMUST00000030586 CltcQ68FD5 1675 aaKnown RBP17.26■□□□□ 0.35
Ccdc28b-201ENSMUST00000030586 NclP09405 707 aaKnown RBP17.25■□□□□ 0.35
Ccdc28b-201ENSMUST00000030586 ShprhQ7TPQ3 1674 aa17.25■□□□□ 0.35
Ccdc28b-201ENSMUST00000030586 Med14A2ABV5 1459 aaKnown RBP17.24■□□□□ 0.35
Ccdc28b-201ENSMUST00000030586 AlkP97793 1621 aa17.23■□□□□ 0.35
Ccdc28b-201ENSMUST00000030586 Supt6hQ62383 1726 aaKnown RBP17.23■□□□□ 0.35
Ccdc28b-201ENSMUST00000030586 RictorQ6QI06 1708 aa17.22■□□□□ 0.35
Ccdc28b-201ENSMUST00000030586 Hnrnpul2Q00PI9 745 aaKnown RBP17.21■□□□□ 0.35
Ccdc28b-201ENSMUST00000030586 Rsph4aQ8BYM7 716 aa17.21■□□□□ 0.35
Ccdc28b-201ENSMUST00000030586 Bcl9Q9D219 1425 aa17.2■□□□□ 0.34
Ccdc28b-201ENSMUST00000030586 Nup155Q99P88 1391 aaKnown RBP17.19■□□□□ 0.34
Ccdc28b-201ENSMUST00000030586 Asxl1P59598 1514 aa17.18■□□□□ 0.34
Ccdc28b-201ENSMUST00000030586 Map4P27546 1125 aaKnown RBP17.18■□□□□ 0.34
Ccdc28b-201ENSMUST00000030586 Hfm1D3Z4R1 1434 aa17.17■□□□□ 0.34
Ccdc28b-201ENSMUST00000030586 Robo2Q7TPD3 1470 aa17.17■□□□□ 0.34
Ccdc28b-201ENSMUST00000030586 Prex1Q69ZK0 1650 aa17.16■□□□□ 0.34
Ccdc28b-201ENSMUST00000030586 Mia2Q91ZV0 1396 aa17.16■□□□□ 0.34
Ccdc28b-201ENSMUST00000030586 Ttll5Q8CHB8 1328 aa17.15■□□□□ 0.34
Ccdc28b-201ENSMUST00000030586 Fhad1A6PWD2 1420 aa17.14■□□□□ 0.33
Ccdc28b-201ENSMUST00000030586 Dip2aQ8BWT5 1523 aa17.14■□□□□ 0.33
Ccdc28b-201ENSMUST00000030586 Ttc21bQ0HA38 1315 aa17.14■□□□□ 0.33
Ccdc28b-201ENSMUST00000030586 Tmem131lQ3U3D7 1597 aa17.14■□□□□ 0.33
Ccdc28b-201ENSMUST00000030586 Topaz1E5FYH1 1653 aa17.13■□□□□ 0.33
Ccdc28b-201ENSMUST00000030586 Myo5cE9Q1F5 1742 aa17.13■□□□□ 0.33
Ccdc28b-201ENSMUST00000030586 Adamts7Q68SA9 1657 aa17.11■□□□□ 0.33
Ccdc28b-201ENSMUST00000030586 Gm13697A2AK42 830 aa17.1■□□□□ 0.33
Ccdc28b-201ENSMUST00000030586 Clstn2Q9ER65 966 aa17.1■□□□□ 0.33
Ccdc28b-201ENSMUST00000030586 AnkarA2RT91 1465 aa17.1■□□□□ 0.33
Ccdc28b-201ENSMUST00000030586 Abcc6Q9R1S7 1498 aa17.1■□□□□ 0.33
Ccdc28b-201ENSMUST00000030586 Kif1bQ60575 1816 aaKnown RBP17.09■□□□□ 0.33
Ccdc28b-201ENSMUST00000030586 Myom3A2ABU4 1439 aa17.07■□□□□ 0.32
Ccdc28b-201ENSMUST00000030586 Ylpm1Q9R0I7 1386 aaKnown RBP17.07■□□□□ 0.32
Ccdc28b-201ENSMUST00000030586 Scn4aQ9ER60 1841 aa17.06■□□□□ 0.32
Ccdc28b-201ENSMUST00000030586 PtprgQ05909 1442 aa17.05■□□□□ 0.32
Ccdc28b-201ENSMUST00000030586 Ube2uB1AUC4 352 aa17.05■□□□□ 0.32
Ccdc28b-201ENSMUST00000030586 Trak1Q6PD31 939 aa17.04■□□□□ 0.32
Ccdc28b-201ENSMUST00000030586 Cd109Q8R422 1442 aa17.04■□□□□ 0.32
Ccdc28b-201ENSMUST00000030586 GphnQ8BUV3 769 aaKnown RBP17.03■□□□□ 0.32
Ccdc28b-201ENSMUST00000030586 Ltbp4Q8K4G1 1666 aa17.02■□□□□ 0.32
Ccdc28b-201ENSMUST00000030586 Nsd2Q8BVE8 1365 aa17.01■□□□□ 0.31
Ccdc28b-201ENSMUST00000030586 Adgrb3Q80ZF8 1522 aa17.01■□□□□ 0.31
Ccdc28b-201ENSMUST00000030586 Akap12Q9WTQ5 1684 aa17.01■□□□□ 0.31
Ccdc28b-201ENSMUST00000030586 Pip4k2bQ80XI4 416 aa17■□□□□ 0.31
Ccdc28b-201ENSMUST00000030586 DroshaQ5HZJ0 1373 aaKnown RBP17■□□□□ 0.31
Ccdc28b-201ENSMUST00000030586 Skint5A7XUY5 1461 aa16.99■□□□□ 0.31
Ccdc28b-201ENSMUST00000030586 Ncoa1P70365 1447 aa16.99■□□□□ 0.31
Ccdc28b-201ENSMUST00000030586 Tecpr2Q3UH45 1423 aa16.98■□□□□ 0.31
Ccdc28b-201ENSMUST00000030586 Mphosph9A6H5Y1 991 aa16.98■□□□□ 0.31
Ccdc28b-201ENSMUST00000030586 Atp7aQ64430 1491 aa16.98■□□□□ 0.31
Ccdc28b-201ENSMUST00000030586 Scaf11E9PZM7 1456 aaKnown RBP16.97■□□□□ 0.31
Ccdc28b-201ENSMUST00000030586 Ino80Q6ZPV2 1559 aa16.96■□□□□ 0.31
Ccdc28b-201ENSMUST00000030586 Rimbp3Q3V0F0 1606 aa16.96■□□□□ 0.3
Ccdc28b-201ENSMUST00000030586 Chd2E9PZM4 1827 aaKnown RBP16.95■□□□□ 0.3
Ccdc28b-201ENSMUST00000030586 Tarbp1E9Q368 1579 aa16.94■□□□□ 0.3
Ccdc28b-201ENSMUST00000030586 Itsn1Q9Z0R4 1714 aa16.93■□□□□ 0.3
Ccdc28b-201ENSMUST00000030586 Dhx9O70133 1380 aaKnown RBP16.93■□□□□ 0.3
Ccdc28b-201ENSMUST00000030586 Erich6D3Z6S9 713 aa16.93■□□□□ 0.3
Ccdc28b-201ENSMUST00000030586 Edc4Q3UJB9 1406 aaKnown RBP16.93■□□□□ 0.3
Ccdc28b-201ENSMUST00000030586 Naip7Q9JIB3 1402 aa16.93■□□□□ 0.3
Ccdc28b-201ENSMUST00000030586 Sall3Q62255 1320 aa16.93■□□□□ 0.3
Ccdc28b-201ENSMUST00000030586 Stk24Q99KH8 431 aa16.91■□□□□ 0.3
Ccdc28b-201ENSMUST00000030586 Lamc1P02468 1607 aaKnown RBP16.91■□□□□ 0.3
Ccdc28b-201ENSMUST00000030586 Efcab6Q6P1E8 1516 aa16.91■□□□□ 0.3
Ccdc28b-201ENSMUST00000030586 Iqgap3F8VQ29 1632 aa16.9■□□□□ 0.3
Ccdc28b-201ENSMUST00000030586 IghaA0A0A6YXW6 389 aa16.89■□□□□ 0.29
Ccdc28b-201ENSMUST00000030586 Mier1Q5UAK0 511 aa16.89■□□□□ 0.29
Ccdc28b-201ENSMUST00000030586 Arid4bA2CG63 1314 aaKnown RBP16.88■□□□□ 0.29
Ccdc28b-201ENSMUST00000030586 Kif13aQ9EQW7 1749 aa16.87■□□□□ 0.29
Ccdc28b-201ENSMUST00000030586 Rims2Q9EQZ7 1530 aa16.87■□□□□ 0.29
Ccdc28b-201ENSMUST00000030586 Kdm5aQ3UXZ9 1690 aa16.87■□□□□ 0.29
Ccdc28b-201ENSMUST00000030586 Phlpp1Q8CHE4 1687 aa16.87■□□□□ 0.29
Ccdc28b-201ENSMUST00000030586 AatkQ80YE4 1365 aa16.87■□□□□ 0.29
Ccdc28b-201ENSMUST00000030586 Pkd2O35245 966 aa16.86■□□□□ 0.29
Ccdc28b-201ENSMUST00000030586 Txndc2Q6P902 515 aa16.85■□□□□ 0.29
Ccdc28b-201ENSMUST00000030586 Prrc2bQ7TPM1 1486 aaKnown RBP16.85■□□□□ 0.29
Ccdc28b-201ENSMUST00000030586 Pik3c2gO70167 1506 aa16.85■□□□□ 0.29
Ccdc28b-201ENSMUST00000030586 Rapgef3Q8VCC8 918 aa16.84■□□□□ 0.29
Ccdc28b-201ENSMUST00000030586 Uggt1Q6P5E4 1551 aa16.84■□□□□ 0.29
Ccdc28b-201ENSMUST00000030586 ErbinQ80TH2 1402 aa16.83■□□□□ 0.28
Ccdc28b-201ENSMUST00000030586 Mroh1E0CZ22 1640 aa16.82■□□□□ 0.28
Ccdc28b-201ENSMUST00000030586 Ccer2J3QPU5 274 aa16.82■□□□□ 0.28
Ccdc28b-201ENSMUST00000030586 Kif21bQ9QXL1 1668 aa16.81■□□□□ 0.28
Ccdc28b-201ENSMUST00000030586 Abca8aQ8K442 1620 aa16.81■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms