RNA–Protein interactions for RNA: ENSMUST00000024620.6

Chd1-201, Transcript of Chromodomain-helicase-DNA-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Chd1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1-201ENSMUST00000024620 Kiaa0753Q6A000 959 aa12.77□□□□□ -0.37
Chd1-201ENSMUST00000024620 Mak16Q8BGS0 296 aaKnown RBP12.75□□□□□ -0.37
Chd1-201ENSMUST00000024620 Kank1E9Q238 1360 aa12.75□□□□□ -0.37
Chd1-201ENSMUST00000024620 Pcdh10E9PXQ7 1057 aa12.75□□□□□ -0.37
Chd1-201ENSMUST00000024620 Dhx57Q6P5D3 1388 aaKnown RBP12.75□□□□□ -0.37
Chd1-201ENSMUST00000024620 Ccnb3Q810T2 1396 aa12.74□□□□□ -0.37
Chd1-201ENSMUST00000024620 Fbxo2Q80UW2 297 aa12.74□□□□□ -0.37
Chd1-201ENSMUST00000024620 Safb2Q80YR5 991 aaKnown RBP12.74□□□□□ -0.37
Chd1-201ENSMUST00000024620 Kdm4aQ8BW72 1064 aa12.74□□□□□ -0.37
Chd1-201ENSMUST00000024620 Cwc22Q8C5N3 908 aaKnown RBP12.74□□□□□ -0.37
Chd1-201ENSMUST00000024620 Exoc8Q6PGF7 716 aa12.73□□□□□ -0.37
Chd1-201ENSMUST00000024620 Pprc1Q6NZN1 1644 aa12.73□□□□□ -0.37
Chd1-201ENSMUST00000024620 Zcchc11B2RX14 1644 aaKnown RBP12.73□□□□□ -0.37
Chd1-201ENSMUST00000024620 Fhad1A6PWD2 1420 aa12.72□□□□□ -0.37
Chd1-201ENSMUST00000024620 Slc4a2P13808 1237 aaKnown RBP12.72□□□□□ -0.37
Chd1-201ENSMUST00000024620 Speer4f1Q9D5Q6 258 aa12.72□□□□□ -0.37
Chd1-201ENSMUST00000024620 NudcO35685 332 aaKnown RBP12.71□□□□□ -0.37
Chd1-201ENSMUST00000024620 SetQ9EQU5 289 aaKnown RBP12.71□□□□□ -0.37
Chd1-201ENSMUST00000024620 PnisrA2AJT4 805 aaKnown RBP12.71□□□□□ -0.38
Chd1-201ENSMUST00000024620 Ttll13A4Q9F6 804 aa12.71□□□□□ -0.38
Chd1-201ENSMUST00000024620 TraipQ8VIG6 470 aa12.71□□□□□ -0.38
Chd1-201ENSMUST00000024620 Mbd3Q9Z2D8 285 aaKnown RBP12.7□□□□□ -0.38
Chd1-201ENSMUST00000024620 Ubap1lG3UW59 384 aa12.7□□□□□ -0.38
Chd1-201ENSMUST00000024620 Fkbp15Q6P9Q6 1216 aaKnown RBP12.69□□□□□ -0.38
Chd1-201ENSMUST00000024620 CntlnA2AM05 1397 aa12.69□□□□□ -0.38
Chd1-201ENSMUST00000024620 Phldb1Q6PDH0 1371 aaKnown RBP12.68□□□□□ -0.38
Chd1-201ENSMUST00000024620 Mia2Q91ZV0 1396 aa12.68□□□□□ -0.38
Chd1-201ENSMUST00000024620 Pdia4P08003 638 aaKnown RBP12.68□□□□□ -0.38
Chd1-201ENSMUST00000024620 Eid3Q3V124 375 aa12.68□□□□□ -0.38
Chd1-201ENSMUST00000024620 Ccdc94Q9D6J3 314 aa12.67□□□□□ -0.38
Chd1-201ENSMUST00000024620 Top2bQ64511 1612 aa12.67□□□□□ -0.38
Chd1-201ENSMUST00000024620 Ccdc18Q640L5 1455 aa12.67□□□□□ -0.38
Chd1-201ENSMUST00000024620 Lrriq1Q0P5X1 1673 aa12.66□□□□□ -0.38
Chd1-201ENSMUST00000024620 Eif4g1Q6NZJ6 1600 aaKnown RBP12.66□□□□□ -0.38
Chd1-201ENSMUST00000024620 Brd4Q9ESU6 1400 aaKnown RBP12.66□□□□□ -0.38
Chd1-201ENSMUST00000024620 Arhgef5E9Q7D5 1581 aa12.66□□□□□ -0.38
Chd1-201ENSMUST00000024620 Arhgap4B1AUY3 965 aa12.66□□□□□ -0.38
Chd1-201ENSMUST00000024620 L3mbtl2P59178 703 aa12.66□□□□□ -0.38
Chd1-201ENSMUST00000024620 Sin3aQ60520 1274 aaKnown RBP12.66□□□□□ -0.38
Chd1-201ENSMUST00000024620 IbspQ61711 324 aa12.66□□□□□ -0.38
Chd1-201ENSMUST00000024620 Ppp1r9bQ6R891 817 aaKnown RBP12.66□□□□□ -0.38
Chd1-201ENSMUST00000024620 Gys2Q8VCB3 704 aa12.66□□□□□ -0.38
Chd1-201ENSMUST00000024620 Gtpbp4Q99ME9 634 aaKnown RBP12.65□□□□□ -0.38
Chd1-201ENSMUST00000024620 Mrs2Q5NCE8 434 aa12.65□□□□□ -0.39
Chd1-201ENSMUST00000024620 Polr3glQ8R0C0 218 aa12.65□□□□□ -0.39
Chd1-201ENSMUST00000024620 1700017N19RikA0A087WPJ1 469 aa12.64□□□□□ -0.39
Chd1-201ENSMUST00000024620 Synj1Q8CHC4 1574 aa12.64□□□□□ -0.39
Chd1-201ENSMUST00000024620 Brpf1B2RRD7 1212 aa12.64□□□□□ -0.39
Chd1-201ENSMUST00000024620 Cald1E9QA15 768 aaKnown RBP12.64□□□□□ -0.39
Chd1-201ENSMUST00000024620 Dhx16G3X8X0 1044 aaKnown RBP12.63□□□□□ -0.39
Chd1-201ENSMUST00000024620 Trim44Q9QXA7 346 aa12.63□□□□□ -0.39
Chd1-201ENSMUST00000024620 Map3k1P53349 1493 aa12.63□□□□□ -0.39
Chd1-201ENSMUST00000024620 Clip1Q922J3 1391 aa12.63□□□□□ -0.39
Chd1-201ENSMUST00000024620 Speer4f2E9Q366 295 aa12.63□□□□□ -0.39
Chd1-201ENSMUST00000024620 BcanQ61361 883 aa12.63□□□□□ -0.39
Chd1-201ENSMUST00000024620 P3h3Q8CG70 732 aa12.63□□□□□ -0.39
Chd1-201ENSMUST00000024620 Antxr1Q9CZ52 562 aa12.63□□□□□ -0.39
Chd1-201ENSMUST00000024620 Ano8Q6PB70 1060 aa12.62□□□□□ -0.39
Chd1-201ENSMUST00000024620 Themis2Q91YX0 663 aa12.62□□□□□ -0.39
Chd1-201ENSMUST00000024620 Igf1rQ60751 1373 aa12.61□□□□□ -0.39
Chd1-201ENSMUST00000024620 Gtf2e1Q9D0D5 440 aa12.61□□□□□ -0.39
Chd1-201ENSMUST00000024620 Wdr62Q3U3T8 1523 aa12.61□□□□□ -0.39
Chd1-201ENSMUST00000024620 Gm45140A0A0N4SUM8 220 aa12.61□□□□□ -0.39
Chd1-201ENSMUST00000024620 Mcm4P49717 862 aa12.61□□□□□ -0.39
Chd1-201ENSMUST00000024620 ScaperF8VQ70 1398 aaKnown RBP12.6□□□□□ -0.39
Chd1-201ENSMUST00000024620 Kcnh8P59111 1102 aa12.6□□□□□ -0.39
Chd1-201ENSMUST00000024620 Gtpbp6Q3U6U5 514 aa12.6□□□□□ -0.39
Chd1-201ENSMUST00000024620 Zfp251Q6PCX8 632 aa12.6□□□□□ -0.39
Chd1-201ENSMUST00000024620 Slc24a1Q91WD8 1130 aa12.6□□□□□ -0.39
Chd1-201ENSMUST00000024620 Ush1cQ9ES64 910 aa12.59□□□□□ -0.39
Chd1-201ENSMUST00000024620 Peg3Q3URU2 1571 aa12.59□□□□□ -0.39
Chd1-201ENSMUST00000024620 Ncoa1P70365 1447 aa12.59□□□□□ -0.39
Chd1-201ENSMUST00000024620 MafgO54790 162 aa12.59□□□□□ -0.39
Chd1-201ENSMUST00000024620 Ofd1Q80Z25 1017 aa12.59□□□□□ -0.39
Chd1-201ENSMUST00000024620 Nol7Q9D7Z3 254 aaKnown RBP12.59□□□□□ -0.39
Chd1-201ENSMUST00000024620 Erbb4Q61527 1308 aa12.58□□□□□ -0.4
Chd1-201ENSMUST00000024620 Mknk2Q8CDB0 459 aa12.58□□□□□ -0.4
Chd1-201ENSMUST00000024620 Ttc41Q692V3 1318 aa12.57□□□□□ -0.4
Chd1-201ENSMUST00000024620 Mtmr7Q9Z2C9 660 aa12.57□□□□□ -0.4
Chd1-201ENSMUST00000024620 Rps6ka5Q8C050 863 aa12.57□□□□□ -0.4
Chd1-201ENSMUST00000024620 Mfap1aC0HKD8 439 aaKnown RBP12.56□□□□□ -0.4
Chd1-201ENSMUST00000024620 Mfap1bC0HKD9 439 aaKnown RBP12.56□□□□□ -0.4
Chd1-201ENSMUST00000024620 Il4rP16382 810 aa12.56□□□□□ -0.4
Chd1-201ENSMUST00000024620 Fez2Q6TYB5 348 aa12.56□□□□□ -0.4
Chd1-201ENSMUST00000024620 Fam114a1Q9D281 569 aa12.56□□□□□ -0.4
Chd1-201ENSMUST00000024620 Naip5Q9R016 1403 aa12.56□□□□□ -0.4
Chd1-201ENSMUST00000024620 Mmp14P53690 582 aa12.56□□□□□ -0.4
Chd1-201ENSMUST00000024620 Kdm2bQ6P1G2 1309 aa12.55□□□□□ -0.4
Chd1-201ENSMUST00000024620 Klf15Q9EPW2 415 aa12.55□□□□□ -0.4
Chd1-201ENSMUST00000024620 Abca5Q8K448 1642 aa12.55□□□□□ -0.4
Chd1-201ENSMUST00000024620 Prm3Q62100 101 aa12.54□□□□□ -0.4
Chd1-201ENSMUST00000024620 Ercc6lQ8BHK9 1240 aa12.54□□□□□ -0.4
Chd1-201ENSMUST00000024620 Fez1Q8K0X8 392 aa12.54□□□□□ -0.4
Chd1-201ENSMUST00000024620 Ipo8Q7TMY7 1010 aa12.53□□□□□ -0.4
Chd1-201ENSMUST00000024620 Eif4g3Q80XI3 1579 aaKnown RBP12.53□□□□□ -0.4
Chd1-201ENSMUST00000024620 Frmpd1A2AKB4 1549 aa12.53□□□□□ -0.4
Chd1-201ENSMUST00000024620 Ssr1Q9CY50 286 aaKnown RBP12.53□□□□□ -0.4
Chd1-201ENSMUST00000024620 Top2aQ01320 1528 aaKnown RBP12.53□□□□□ -0.4
Chd1-201ENSMUST00000024620 MccE9PWI3 1003 aa12.53□□□□□ -0.4
Chd1-201ENSMUST00000024620 Becn1O88597 448 aa12.52□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms