RNA–Protein interactions for RNA: ENSMUST00000023068.7

Smc1b-201, Transcript of Structural maintenance of chromosomes protein 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc1b, Length 4,047 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1b-201ENSMUST00000023068 Rnf17Q99MV7 1640 aa10.67□□□□□ -0.7
Smc1b-201ENSMUST00000023068 Gm38655A0A286YDK6 273 aa10.67□□□□□ -0.7
Smc1b-201ENSMUST00000023068 Atp7aQ64430 1491 aa10.67□□□□□ -0.7
Smc1b-201ENSMUST00000023068 Fhod3Q76LL6 1578 aa10.66□□□□□ -0.7
Smc1b-201ENSMUST00000023068 Prdm16A2A935 1275 aa10.66□□□□□ -0.7
Smc1b-201ENSMUST00000023068 Ptch1Q61115 1434 aa10.65□□□□□ -0.7
Smc1b-201ENSMUST00000023068 Mrs2Q5NCE8 434 aa10.65□□□□□ -0.71
Smc1b-201ENSMUST00000023068 Setbp1Q9Z180 1582 aa10.64□□□□□ -0.71
Smc1b-201ENSMUST00000023068 Cdk13Q69ZA1 1511 aaKnown RBP10.64□□□□□ -0.71
Smc1b-201ENSMUST00000023068 Atp1b4Q99ME6 356 aa10.64□□□□□ -0.71
Smc1b-201ENSMUST00000023068 Csrnp3P59055 597 aa10.63□□□□□ -0.71
Smc1b-201ENSMUST00000023068 Adgrl2Q8JZZ7 1487 aa10.63□□□□□ -0.71
Smc1b-201ENSMUST00000023068 Kidins220E9Q9B7 1793 aa10.63□□□□□ -0.71
Smc1b-201ENSMUST00000023068 Zfyve16Q80U44 1528 aa10.63□□□□□ -0.71
Smc1b-201ENSMUST00000023068 Eif5bQ05D44 1216 aaKnown RBP10.62□□□□□ -0.71
Smc1b-201ENSMUST00000023068 Cfap74Q3UY96 1578 aa10.62□□□□□ -0.71
Smc1b-201ENSMUST00000023068 Depdc5P61460 1591 aa10.62□□□□□ -0.71
Smc1b-201ENSMUST00000023068 Ak9G3UYQ4 1894 aa10.62□□□□□ -0.71
Smc1b-201ENSMUST00000023068 Mug2P28666 1451 aa10.61□□□□□ -0.71
Smc1b-201ENSMUST00000023068 Myom3A2ABU4 1439 aa10.61□□□□□ -0.71
Smc1b-201ENSMUST00000023068 Abcc3B2RX12 1523 aa10.61□□□□□ -0.71
Smc1b-201ENSMUST00000023068 Trpm2Q91YD4 1506 aa10.61□□□□□ -0.71
Smc1b-201ENSMUST00000023068 Usp54Q8BL06 1588 aaKnown RBP10.6□□□□□ -0.71
Smc1b-201ENSMUST00000023068 Exoc6Q8R313 802 aa10.6□□□□□ -0.71
Smc1b-201ENSMUST00000023068 Adgrl3Q80TS3 1537 aa10.6□□□□□ -0.71
Smc1b-201ENSMUST00000023068 Fan1Q69ZT1 1020 aa10.6□□□□□ -0.71
Smc1b-201ENSMUST00000023068 PtprgQ05909 1442 aa10.59□□□□□ -0.71
Smc1b-201ENSMUST00000023068 Anks4bQ8K3X6 423 aa10.59□□□□□ -0.71
Smc1b-201ENSMUST00000023068 Lamc1P02468 1607 aaKnown RBP10.59□□□□□ -0.71
Smc1b-201ENSMUST00000023068 Tarbp1E9Q368 1579 aa10.59□□□□□ -0.71
Smc1b-201ENSMUST00000023068 P3h3Q8CG70 732 aa10.59□□□□□ -0.71
Smc1b-201ENSMUST00000023068 Abca9Q8K449 1623 aa10.59□□□□□ -0.71
Smc1b-201ENSMUST00000023068 Gm20521D3Z5F7 333 aa10.58□□□□□ -0.72
Smc1b-201ENSMUST00000023068 OvosQ3UU35 1456 aa10.58□□□□□ -0.72
Smc1b-201ENSMUST00000023068 Dot1lQ6XZL8 1540 aa10.58□□□□□ -0.72
Smc1b-201ENSMUST00000023068 Smg6P61406 1418 aaKnown RBP10.57□□□□□ -0.72
Smc1b-201ENSMUST00000023068 Cnga1P29974 684 aa10.57□□□□□ -0.72
Smc1b-201ENSMUST00000023068 Pdcd11Q6NS46 1862 aaKnown RBP10.57□□□□□ -0.72
Smc1b-201ENSMUST00000023068 Ttc21bQ0HA38 1315 aa10.57□□□□□ -0.72
Smc1b-201ENSMUST00000023068 NrdcQ8BHG1 1161 aa10.57□□□□□ -0.72
Smc1b-201ENSMUST00000023068 Ncoa1P70365 1447 aa10.55□□□□□ -0.72
Smc1b-201ENSMUST00000023068 Afap1Q80YS6 731 aa10.55□□□□□ -0.72
Smc1b-201ENSMUST00000023068 Kiaa1210E9Q0C6 1637 aa10.55□□□□□ -0.72
Smc1b-201ENSMUST00000023068 Srpk2O54781 681 aaKnown RBP10.55□□□□□ -0.72
Smc1b-201ENSMUST00000023068 Cwc22Q8C5N3 908 aaKnown RBP10.55□□□□□ -0.72
Smc1b-201ENSMUST00000023068 Yeats2Q3TUF7 1407 aa10.55□□□□□ -0.72
Smc1b-201ENSMUST00000023068 Dnajc5gQ8C632 165 aa10.55□□□□□ -0.72
Smc1b-201ENSMUST00000023068 Kif1bQ60575 1816 aaKnown RBP10.55□□□□□ -0.72
Smc1b-201ENSMUST00000023068 Nsd2Q8BVE8 1365 aa10.55□□□□□ -0.72
Smc1b-201ENSMUST00000023068 Xrn1P97789 1719 aaKnown RBP10.54□□□□□ -0.72
Smc1b-201ENSMUST00000023068 Kif21bQ9QXL1 1668 aa10.54□□□□□ -0.72
Smc1b-201ENSMUST00000023068 Col17a1Q07563 1470 aa10.54□□□□□ -0.72
Smc1b-201ENSMUST00000023068 Stk26Q99JT2 416 aa10.54□□□□□ -0.72
Smc1b-201ENSMUST00000023068 Edc4Q3UJB9 1406 aaKnown RBP10.53□□□□□ -0.72
Smc1b-201ENSMUST00000023068 Cfap65Q3V0B4 1847 aa10.53□□□□□ -0.72
Smc1b-201ENSMUST00000023068 Rock2P70336 1388 aa10.53□□□□□ -0.72
Smc1b-201ENSMUST00000023068 Camsap2Q8C1B1 1461 aa10.53□□□□□ -0.72
Smc1b-201ENSMUST00000023068 ShprhQ7TPQ3 1674 aa10.53□□□□□ -0.72
Smc1b-201ENSMUST00000023068 Mast1Q9R1L5 1570 aa10.53□□□□□ -0.72
Smc1b-201ENSMUST00000023068 ErbinQ80TH2 1402 aa10.53□□□□□ -0.72
Smc1b-201ENSMUST00000023068 Srcin1Q9QWI6 1250 aa10.52□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Pprc1Q6NZN1 1644 aa10.52□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Inpp5dQ9ES52 1191 aa10.51□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Nos1Q9Z0J4 1429 aa10.51□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Hecw1Q8K4P8 1604 aa10.51□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Gli2Q0VGT2 1544 aa10.51□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Slc4a1apE9PX68 744 aa10.5□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Pank3Q8R2W9 370 aa10.5□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Polr3aB2RXC6 1390 aa10.5□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Ecm2Q5FW85 670 aa10.5□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Slc4a2P13808 1237 aaKnown RBP10.49□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Stra8P70278 393 aa10.49□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Usp40Q8BWR4 1235 aa10.49□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Ylpm1Q9R0I7 1386 aaKnown RBP10.49□□□□□ -0.73
Smc1b-201ENSMUST00000023068 SafbD3YXK2 937 aaKnown RBP10.49□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Naip6Q9JIB6 1403 aa10.49□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Rock1P70335 1354 aa10.49□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Abca6Q8K441 1624 aa10.49□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Mbd5B1AYB6 1498 aa10.48□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Znf518aB2RRF6 1478 aaKnown RBP10.48□□□□□ -0.73
Smc1b-201ENSMUST00000023068 RalgapbQ8BQZ4 1484 aa10.47□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Stag3O70576 1240 aa10.47□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Safb2Q80YR5 991 aaKnown RBP10.47□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Rad21Q61550 635 aaKnown RBP10.47□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Abcc6Q9R1S7 1498 aa10.47□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Gm13695A2AK44 830 aa10.46□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Gtf2e1Q9D0D5 440 aa10.46□□□□□ -0.73
Smc1b-201ENSMUST00000023068 Zranb1Q7M760 708 aa10.46□□□□□ -0.74
Smc1b-201ENSMUST00000023068 Znf710Q3U288 666 aa10.45□□□□□ -0.74
Smc1b-201ENSMUST00000023068 Dip2cE9PWR4 1557 aa10.45□□□□□ -0.74
Smc1b-201ENSMUST00000023068 Puf60Q3UEB3 564 aaKnown RBP10.45□□□□□ -0.74
Smc1b-201ENSMUST00000023068 Q7TT23 1179 aa10.45□□□□□ -0.74
Smc1b-201ENSMUST00000023068 Tulp4Q9JIL5 1547 aa10.44□□□□□ -0.74
Smc1b-201ENSMUST00000023068 Myo5cE9Q1F5 1742 aa10.44□□□□□ -0.74
Smc1b-201ENSMUST00000023068 Shq1Q7TMX5 569 aa10.44□□□□□ -0.74
Smc1b-201ENSMUST00000023068 Adamts13Q769J6 1426 aa10.44□□□□□ -0.74
Smc1b-201ENSMUST00000023068 Cpsf1Q9EPU4 1441 aaKnown RBP10.44□□□□□ -0.74
Smc1b-201ENSMUST00000023068 Rpgrip1lQ8CG73 1264 aa10.43□□□□□ -0.74
Smc1b-201ENSMUST00000023068 AatkQ80YE4 1365 aa10.43□□□□□ -0.74
Smc1b-201ENSMUST00000023068 Hdac5Q9Z2V6 1113 aa10.43□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms