RNA–Protein interactions for RNA: ENSMUST00000001818.4

Crnkl1-201, Transcript of Crooked neck-like protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Crnkl1, Length 3,428 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1-201ENSMUST00000001818 Kiaa1210E9Q0C6 1637 aa10.5□□□□□ -0.73
Crnkl1-201ENSMUST00000001818 SphkapQ6NSW3 1687 aa10.5□□□□□ -0.73
Crnkl1-201ENSMUST00000001818 Usp47Q8BY87 1376 aa10.5□□□□□ -0.73
Crnkl1-201ENSMUST00000001818 Cd109Q8R422 1442 aa10.5□□□□□ -0.73
Crnkl1-201ENSMUST00000001818 Clasp1Q80TV8 1535 aaKnown RBP10.49□□□□□ -0.73
Crnkl1-201ENSMUST00000001818 Gm13695A2AK44 830 aa10.49□□□□□ -0.73
Crnkl1-201ENSMUST00000001818 Hdac5Q9Z2V6 1113 aa10.48□□□□□ -0.73
Crnkl1-201ENSMUST00000001818 Yeats2Q3TUF7 1407 aa10.48□□□□□ -0.73
Crnkl1-201ENSMUST00000001818 Abcc3B2RX12 1523 aa10.47□□□□□ -0.73
Crnkl1-201ENSMUST00000001818 Gm32742A0A1B0GT42 1604 aa10.47□□□□□ -0.73
Crnkl1-201ENSMUST00000001818 Ifit1bl1D3Z6F0 470 aa10.46□□□□□ -0.73
Crnkl1-201ENSMUST00000001818 Fndc1E9Q043 1732 aa10.46□□□□□ -0.74
Crnkl1-201ENSMUST00000001818 Dennd4bQ3U1Y4 1499 aa10.46□□□□□ -0.74
Crnkl1-201ENSMUST00000001818 Adgrl2Q8JZZ7 1487 aa10.46□□□□□ -0.74
Crnkl1-201ENSMUST00000001818 Prdm10Q3UTQ7 1184 aa10.46□□□□□ -0.74
Crnkl1-201ENSMUST00000001818 Ankrd36D3Z4K0 1415 aa10.46□□□□□ -0.74
Crnkl1-201ENSMUST00000001818 Eif5bQ05D44 1216 aaKnown RBP10.45□□□□□ -0.74
Crnkl1-201ENSMUST00000001818 AlkP97793 1621 aa10.45□□□□□ -0.74
Crnkl1-201ENSMUST00000001818 Ttc21bQ0HA38 1315 aa10.45□□□□□ -0.74
Crnkl1-201ENSMUST00000001818 Sall3Q62255 1320 aa10.45□□□□□ -0.74
Crnkl1-201ENSMUST00000001818 Nsd2Q8BVE8 1365 aa10.44□□□□□ -0.74
Crnkl1-201ENSMUST00000001818 Abca9Q8K449 1623 aa10.44□□□□□ -0.74
Crnkl1-201ENSMUST00000001818 Synj2Q9D2G5 1434 aa10.44□□□□□ -0.74
Crnkl1-201ENSMUST00000001818 Fmn2Q9JL04 1578 aa10.43□□□□□ -0.74
Crnkl1-201ENSMUST00000001818 Myom3A2ABU4 1439 aa10.43□□□□□ -0.74
Crnkl1-201ENSMUST00000001818 Kidins220E9Q9B7 1793 aa10.43□□□□□ -0.74
Crnkl1-201ENSMUST00000001818 AglF8VPN4 1532 aa10.41□□□□□ -0.74
Crnkl1-201ENSMUST00000001818 Rsph4aQ8BYM7 716 aa10.41□□□□□ -0.74
Crnkl1-201ENSMUST00000001818 Cdc42bpbQ7TT50 1713 aa10.41□□□□□ -0.74
Crnkl1-201ENSMUST00000001818 Ttc37F8VPK0 1563 aa10.41□□□□□ -0.74
Crnkl1-201ENSMUST00000001818 Gm20521D3Z5F7 333 aa10.41□□□□□ -0.74
Crnkl1-201ENSMUST00000001818 Gli2Q0VGT2 1544 aa10.4□□□□□ -0.74
Crnkl1-201ENSMUST00000001818 Naip6Q9JIB6 1403 aa10.4□□□□□ -0.74
Crnkl1-201ENSMUST00000001818 Cfap65Q3V0B4 1847 aa10.4□□□□□ -0.74
Crnkl1-201ENSMUST00000001818 Nos1Q9Z0J4 1429 aa10.4□□□□□ -0.74
Crnkl1-201ENSMUST00000001818 Srpk2O54781 681 aaKnown RBP10.4□□□□□ -0.75
Crnkl1-201ENSMUST00000001818 Rundc1Q0VDN7 615 aa10.39□□□□□ -0.75
Crnkl1-201ENSMUST00000001818 Txndc2Q6P902 515 aa10.39□□□□□ -0.75
Crnkl1-201ENSMUST00000001818 NpatQ8BMA5 1420 aa10.39□□□□□ -0.75
Crnkl1-201ENSMUST00000001818 Card11Q8CIS0 1159 aa10.39□□□□□ -0.75
Crnkl1-201ENSMUST00000001818 Anks4bQ8K3X6 423 aa10.39□□□□□ -0.75
Crnkl1-201ENSMUST00000001818 Znf518aB2RRF6 1478 aaKnown RBP10.39□□□□□ -0.75
Crnkl1-201ENSMUST00000001818 Atp7aQ64430 1491 aa10.39□□□□□ -0.75
Crnkl1-201ENSMUST00000001818 Arid4bA2CG63 1314 aaKnown RBP10.38□□□□□ -0.75
Crnkl1-201ENSMUST00000001818 ErbinQ80TH2 1402 aa10.38□□□□□ -0.75
Crnkl1-201ENSMUST00000001818 Wwc2Q6NXJ0 1187 aa10.37□□□□□ -0.75
Crnkl1-201ENSMUST00000001818 Fan1Q69ZT1 1020 aa10.37□□□□□ -0.75
Crnkl1-201ENSMUST00000001818 Ylpm1Q9R0I7 1386 aaKnown RBP10.37□□□□□ -0.75
Crnkl1-201ENSMUST00000001818 Atp10aO54827 1508 aa10.36□□□□□ -0.75
Crnkl1-201ENSMUST00000001818 Pdcd11Q6NS46 1862 aaKnown RBP10.36□□□□□ -0.75
Crnkl1-201ENSMUST00000001818 Washc2Q6PGL7 1334 aa10.36□□□□□ -0.75
Crnkl1-201ENSMUST00000001818 Usp54Q8BL06 1588 aaKnown RBP10.36□□□□□ -0.75
Crnkl1-201ENSMUST00000001818 Stk26Q99JT2 416 aa10.36□□□□□ -0.75
Crnkl1-201ENSMUST00000001818 Dip2cE9PWR4 1557 aa10.35□□□□□ -0.75
Crnkl1-201ENSMUST00000001818 Psme1P97371 249 aa10.35□□□□□ -0.75
Crnkl1-201ENSMUST00000001818 Mrs2Q5NCE8 434 aa10.35□□□□□ -0.75
Crnkl1-201ENSMUST00000001818 PtprgQ05909 1442 aa10.35□□□□□ -0.75
Crnkl1-201ENSMUST00000001818 SafbD3YXK2 937 aaKnown RBP10.34□□□□□ -0.75
Crnkl1-201ENSMUST00000001818 Mast1Q9R1L5 1570 aa10.34□□□□□ -0.75
Crnkl1-201ENSMUST00000001818 Rprd2Q6NXI6 1469 aaKnown RBP10.33□□□□□ -0.76
Crnkl1-201ENSMUST00000001818 Naip5Q9R016 1403 aa10.32□□□□□ -0.76
Crnkl1-201ENSMUST00000001818 Hecw1Q8K4P8 1604 aa10.32□□□□□ -0.76
Crnkl1-201ENSMUST00000001818 Shq1Q7TMX5 569 aa10.32□□□□□ -0.76
Crnkl1-201ENSMUST00000001818 AdgbG3UZ78 1657 aa10.31□□□□□ -0.76
Crnkl1-201ENSMUST00000001818 Kif1bQ60575 1816 aaKnown RBP10.31□□□□□ -0.76
Crnkl1-201ENSMUST00000001818 Supt6hQ62383 1726 aaKnown RBP10.31□□□□□ -0.76
Crnkl1-201ENSMUST00000001818 Kdm5cP41230 1554 aa10.3□□□□□ -0.76
Crnkl1-201ENSMUST00000001818 Pik3c2gO70167 1506 aa10.3□□□□□ -0.76
Crnkl1-201ENSMUST00000001818 Q9D9H8 365 aa10.3□□□□□ -0.76
Crnkl1-201ENSMUST00000001818 RereQ80TZ9 1558 aa10.3□□□□□ -0.76
Crnkl1-201ENSMUST00000001818 Stag3O70576 1240 aa10.3□□□□□ -0.76
Crnkl1-201ENSMUST00000001818 NrdcQ8BHG1 1161 aa10.3□□□□□ -0.76
Crnkl1-201ENSMUST00000001818 Neurl4Q5NCX5 1563 aa10.29□□□□□ -0.76
Crnkl1-201ENSMUST00000001818 Dapk1Q80YE7 1442 aa10.29□□□□□ -0.76
Crnkl1-201ENSMUST00000001818 Asxl1P59598 1514 aa10.29□□□□□ -0.76
Crnkl1-201ENSMUST00000001818 Hecw2Q6I6G8 1578 aa10.29□□□□□ -0.76
Crnkl1-201ENSMUST00000001818 Edc4Q3UJB9 1406 aaKnown RBP10.28□□□□□ -0.76
Crnkl1-201ENSMUST00000001818 Trpm2Q91YD4 1506 aa10.28□□□□□ -0.76
Crnkl1-201ENSMUST00000001818 IqubQ8CDK3 788 aa10.28□□□□□ -0.76
Crnkl1-201ENSMUST00000001818 Srcin1Q9QWI6 1250 aa10.27□□□□□ -0.76
Crnkl1-201ENSMUST00000001818 1700123L14RikQ3V2K7 440 aa10.26□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 Usp40Q8BWR4 1235 aa10.26□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 Gtf2e1Q9D0D5 440 aa10.26□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 Utp14aQ640M1 767 aaKnown RBP10.26□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 ShprhQ7TPQ3 1674 aa10.26□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 Xrn1P97789 1719 aaKnown RBP10.26□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 Puf60Q3UEB3 564 aaKnown RBP10.26□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 Exoc6Q8R313 802 aa10.26□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 Hfm1D3Z4R1 1434 aa10.25□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 Ecm2Q5FW85 670 aa10.25□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 Cnga1P29974 684 aa10.25□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 Cwc22Q8C5N3 908 aaKnown RBP10.25□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 Pip4k2bQ80XI4 416 aa10.24□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 AatkQ80YE4 1365 aa10.24□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 Tarbp1E9Q368 1579 aa10.24□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 Plch2A2AP18 1501 aa10.23□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 Rock1P70335 1354 aa10.23□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 Fhod3Q76LL6 1578 aa10.23□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 Cdc42bpgQ80UW5 1551 aa10.23□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 Abca6Q8K441 1624 aa10.23□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms