RNA–Protein interactions for RNA: YPR189W

SKI3, Transcript of Ski complex component and TPR protein, yeast

Gene SKI3, Length 4,299 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI3	YPR189W	YCR016W	P25617	290 aa	Known RBP	1.49	□□□□□ -2.17
SKI3	YPR189W	PPZ1	P26570	692 aa		1.49	□□□□□ -2.17
SKI3	YPR189W	ZUO1	P32527	433 aa	Known RBP	1.49	□□□□□ -2.17
SKI3	YPR189W	RAD24	P32641	659 aa		1.49	□□□□□ -2.17
SKI3	YPR189W	TSA1	P34760	196 aa	Known RBP	1.49	□□□□□ -2.17
SKI3	YPR189W	LYS1	P38998	373 aa	RIP-Chip data	1.49	□□□□□ -2.17	not detected
SKI3	YPR189W	EXO1	P39875	702 aa		1.49	□□□□□ -2.17
SKI3	YPR189W	LYS12	P40495	371 aa	Known RBP	1.49	□□□□□ -2.17
SKI3	YPR189W	YJR154W	P47181	346 aa		1.49	□□□□□ -2.17
SKI3	YPR189W	YMR010W	Q03687	405 aa		1.49	□□□□□ -2.17
SKI3	YPR189W	DIC1	Q06143	298 aa		1.49	□□□□□ -2.17
SKI3	YPR189W	TAF10	Q12030	206 aa		1.49	□□□□□ -2.17
SKI3	YPR189W	SLF1	Q12034	447 aa	Known RBP	1.49	□□□□□ -2.17
SKI3	YPR189W	IKI3	Q06706	1349 aa	Known RBP	1.48	□□□□□ -2.17
SKI3	YPR189W	TDH2	P00358	332 aa	Known RBP	1.48	□□□□□ -2.17
SKI3	YPR189W	ARF1	P11076	181 aa	Known RBP	1.48	□□□□□ -2.17
SKI3	YPR189W	APA2	P22108	325 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	GPI12	P23797	304 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	COS9	P36034	407 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	YKL162C	P36052	402 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	PHD1	P36093	366 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	YHL026C	P38740	315 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	YHR182W	P38870	785 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	YRB2	P40517	327 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	TOS2	P50078	622 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	PKP2	P53170	491 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	ENT5	Q03769	411 aa	Known RBP	1.48	□□□□□ -2.17
SKI3	YPR189W	YOL075C	Q08234	1294 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	YOR029W	Q12243	111 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	RDL1	Q12305	139 aa	Known RBP	1.48	□□□□□ -2.17
SKI3	YPR189W	PRP46	Q12417	451 aa	Predicted RBP	1.48	□□□□□ -2.17
SKI3	YPR189W	MEX67	Q99257	599 aa	Known RBP	1.48	□□□□□ -2.17
SKI3	YPR189W	MATALPHA1	P0CY06	175 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	HMLALPHA1	P0CY07	175 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	CTR86	P25355	563 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	RPS2	P25443	254 aa	Known RBP	1.48	□□□□□ -2.17
SKI3	YPR189W	POP5	P28005	173 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	MEI5	P32489	222 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	YKL097C	P34245	136 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	CUE2	P36075	443 aa	Known RBP	1.48	□□□□□ -2.17
SKI3	YPR189W	SLX1	P38324	304 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	YAL037W	P39728	267 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	SDS3	P40505	327 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	HXT9	P40885	567 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	SSN8	P47821	323 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	MAL12	P53341	584 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	1.48	□□□□□ -2.17	not detected
SKI3	YPR189W	SPR6	Q01684	191 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	SPP2	Q02521	185 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	YPL068C	Q02749	293 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	PNG1	Q02890	363 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	YLR283W	Q05867	314 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	RAX1	Q08760	435 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	RKM5	Q12367	367 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	UBA3	Q99344	299 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	MET16	P18408	261 aa	Predicted RBP	1.48	□□□□□ -2.17
SKI3	YPR189W	MXR2	P25566	168 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	RPL5	P26321	297 aa	Known RBP	1.48	□□□□□ -2.17
SKI3	YPR189W	RPS5	P26783	225 aa	Known RBP	1.48	□□□□□ -2.17
SKI3	YPR189W	ITR1	P30605	584 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	PPZ2	P33329	710 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	MTC6	P38849	526 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	UTP25	P40498	721 aa	Known RBP	1.48	□□□□□ -2.17
SKI3	YPR189W	YIA6	P40556	373 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	1.48	□□□□□ -2.17	not detected
SKI3	YPR189W	HAM1	P47119	197 aa	Known RBP	1.48	□□□□□ -2.17
SKI3	YPR189W	HSH155	P49955	971 aa	Known RBP	1.48	□□□□□ -2.17
SKI3	YPR189W	SUN4	P53616	420 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	CTL1	Q03220	320 aa	Known RBP	1.48	□□□□□ -2.17
SKI3	YPR189W	IZH1	Q03419	316 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	MYO5	Q04439	1219 aa	Known RBP	1.48	□□□□□ -2.17
SKI3	YPR189W	LDS2	Q08218	356 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	YOS9	Q99220	542 aa		1.48	□□□□□ -2.17
SKI3	YPR189W	RAD3	P06839	778 aa		1.47	□□□□□ -2.17
SKI3	YPR189W	ATP1	P07251	545 aa	Known RBP	1.47	□□□□□ -2.17
SKI3	YPR189W	COQ3	P27680	312 aa		1.47	□□□□□ -2.17
SKI3	YPR189W	ZIP1	P31111	875 aa		1.47	□□□□□ -2.17
SKI3	YPR189W	TMT1	P32643	299 aa		1.47	□□□□□ -2.17
SKI3	YPR189W	TOA2	P32774	122 aa		1.47	□□□□□ -2.17
SKI3	YPR189W	AIM29	P36154	155 aa		1.47	□□□□□ -2.17
SKI3	YPR189W	YMR134W	P40207	237 aa		1.47	□□□□□ -2.17
SKI3	YPR189W	IRC7	P43623	340 aa		1.47	□□□□□ -2.17
SKI3	YPR189W	YIP1	P53039	248 aa		1.47	□□□□□ -2.17
SKI3	YPR189W	EFM5	P53200	248 aa	Known RBP	1.47	□□□□□ -2.17
SKI3	YPR189W	MRPL50	P53724	139 aa		1.47	□□□□□ -2.17
SKI3	YPR189W	TRM112	P53738	135 aa	Predicted RBP	1.47	□□□□□ -2.17
SKI3	YPR189W	EAF7	P53911	425 aa	Known RBP	1.47	□□□□□ -2.17
SKI3	YPR189W	ESBP6	P53918	673 aa		1.47	□□□□□ -2.17
SKI3	YPR189W	SLT2	Q00772	484 aa		1.47	□□□□□ -2.17
SKI3	YPR189W	ATG34	Q12292	412 aa		1.47	□□□□□ -2.17
SKI3	YPR189W	ADH2	P00331	348 aa	Known RBP	1.47	□□□□□ -2.17
SKI3	YPR189W	MRP1	P10662	321 aa	Known RBP	1.47	□□□□□ -2.17
SKI3	YPR189W	MAS2	P11914	482 aa		1.47	□□□□□ -2.17
SKI3	YPR189W	YPK3	P38070	525 aa		1.47	□□□□□ -2.17
SKI3	YPR189W	MAL32	P38158	584 aa		1.47	□□□□□ -2.17
SKI3	YPR189W	FAA2	P39518	744 aa		1.47	□□□□□ -2.17
SKI3	YPR189W	PHO90	P39535	881 aa		1.47	□□□□□ -2.17
SKI3	YPR189W	YEL020C	P39994	560 aa		1.47	□□□□□ -2.17
SKI3	YPR189W	BTT1	P40314	149 aa	Predicted RBP	1.47	□□□□□ -2.17
SKI3	YPR189W	MRX5	P47007	382 aa		1.47	□□□□□ -2.17

Retrieved 100 of 5,963 RNA–protein pairs in 44.2 ms