RNA–Protein interactions for RNA: YPR184W

GDB1, Transcript of Glycogen debranching enzyme, yeast

Gene GDB1, Length 4,611 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDB1	YPR184W	VMA6	P32366	345 aa	Known RBP	4.75	□□□□□ -1.65
GDB1	YPR184W	GIP4	P39732	760 aa		4.75	□□□□□ -1.65
GDB1	YPR184W	SRB7	P47822	140 aa		4.75	□□□□□ -1.65
GDB1	YPR184W	GPM1	P00950	247 aa	Known RBP	4.74	□□□□□ -1.65
GDB1	YPR184W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
GDB1	YPR184W	YCR102C	P25608	368 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	CTS1	P29029	562 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	SFA1	P32771	386 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	MPS1	P54199	764 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	COX20	Q04935	205 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	YDL086W	Q07505	273 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	AIM6	Q07716	390 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	DBF2	P22204	572 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	PRE4	P30657	266 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	APE2	P32454	952 aa	Known RBP	4.74	□□□□□ -1.65
GDB1	YPR184W	PTC1	P35182	281 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	YBR284W	P38150	797 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	YBR096W	P38256	230 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	AMN1	P38285	549 aa	Predicted RBP	4.74	□□□□□ -1.65
GDB1	YPR184W	NVJ1	P38881	321 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	PFK26	P40433	827 aa	Known RBP	4.74	□□□□□ -1.65
GDB1	YPR184W	YIL108W	P40483	696 aa	Known RBP	4.74	□□□□□ -1.65
GDB1	YPR184W	MNN5	P46982	586 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	YJL045W	P47052	634 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	HMS2	P47175	358 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	JAC1	P53193	184 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	NMA111	P53920	997 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	YPL068C	Q02749	293 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	YPR127W	Q06494	345 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	NTG2	Q08214	380 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	HSP30	P25619	332 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	HYM1	P32464	399 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	RPN2	P32565	945 aa	Known RBP	4.74	□□□□□ -1.65
GDB1	YPR184W	LSM1	P47017	172 aa	Known RBP	4.74	□□□□□ -1.65
GDB1	YPR184W	RIM21	P48565	533 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	CWC25	P53854	179 aa	Known RBP	4.74	□□□□□ -1.65
GDB1	YPR184W	DIG1	Q03063	452 aa	Known RBP	4.74	□□□□□ -1.65
GDB1	YPR184W	PIR1	Q03178	341 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	AIM36	Q03798	255 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	GPI11	Q06636	219 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	ECM29	P38737	1868 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	RAS1	P01119	309 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	DST1	P07273	309 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	LSB5	P25369	354 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	SOL2	P37262	315 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	PCL6	P40038	420 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	HPM1	P40481	377 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	EKI1	Q03764	534 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	HNT1	Q04344	158 aa	Known RBP	4.74	□□□□□ -1.65
GDB1	YPR184W	DPB4	Q04603	196 aa	Known RBP	4.74	□□□□□ -1.65
GDB1	YPR184W	MRX8	Q05473	314 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	TRM13	Q12383	476 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	YLR146W-A	Q2V2P1	62 aa		4.74	□□□□□ -1.65
GDB1	YPR184W	SYP1	P25623	870 aa	Known RBP	4.73	□□□□□ -1.65
GDB1	YPR184W	CDC13	P32797	924 aa	Known RBP	4.73	□□□□□ -1.65
GDB1	YPR184W	TIF3	P34167	436 aa	Known RBP	4.73	□□□□□ -1.65
GDB1	YPR184W	MIA40	P36046	403 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	PTC4	P38089	393 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	FMP52	P40008	231 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	YIL165C	P40446	119 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	PIR3	Q03180	325 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	YDR179W-A	Q03983	463 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	MMT2	Q08970	484 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	NSI1	Q12457	570 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	STE2	D6VTK4	431 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	SAM35	P14693	329 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	MMS21	P38632	267 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	YPT35	P38815	214 aa	Known RBP	4.73	□□□□□ -1.65
GDB1	YPR184W	COA1	P40452	197 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	BNA6	P43619	295 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	BRR6	P53062	197 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	GPG1	P53130	126 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	SLT2	Q00772	484 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	ERP1	Q05359	219 aa	Known RBP	4.73	□□□□□ -1.65
GDB1	YPR184W	YLR173W	Q06247	608 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	HAL9	Q12180	1030 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	YOR032W-A	Q8TGS1	66 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	FLO1	P32768	1537 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	COX2	P00410	251 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	ADE5,7	P07244	802 aa	Known RBP	4.73	□□□□□ -1.65
GDB1	YPR184W	RPS21A	P0C0V8	87 aa	Known RBP	4.73	□□□□□ -1.65
GDB1	YPR184W	TRM1	P15565	570 aa	Known RBP	4.73	□□□□□ -1.65
GDB1	YPR184W	SEN2	P16658	377 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	PBN1	P25580	416 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	FEN2	P25621	512 aa	Known RBP	4.73	□□□□□ -1.65
GDB1	YPR184W	NSA1	P53136	463 aa	Predicted RBP	4.73	□□□□□ -1.65
GDB1	YPR184W	RSM27	P53305	110 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	CUZ1	P53899	274 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	ORM2	Q06144	216 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	ARR1	Q06596	294 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	AKR2	Q12013	749 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	ATP16	Q12165	160 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	ERP4	Q12450	207 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	YCR101C	P25607	182 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	SUI1	P32911	108 aa	Known RBP	4.73	□□□□□ -1.65
GDB1	YPR184W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
GDB1	YPR184W	NTA1	P40354	457 aa		4.73	□□□□□ -1.65
GDB1	YPR184W	ACS2	P52910	683 aa	Known RBP	4.73	□□□□□ -1.65
GDB1	YPR184W	SEH1	P53011	349 aa	Known RBP	4.73	□□□□□ -1.65
GDB1	YPR184W	MTL1	P53214	551 aa		4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms