RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W RPS16BP0CX52 143 aaKnown RBP1.51□□□□□ -2.17
CTF4YPR135W ATP10P18496 279 aa1.51□□□□□ -2.17
CTF4YPR135W RPB4P20433 221 aaPredicted RBP1.51□□□□□ -2.17
CTF4YPR135W RHB1P25378 209 aa1.51□□□□□ -2.17
CTF4YPR135W BOS1P25385 244 aa1.51□□□□□ -2.17
CTF4YPR135W PRP21P32524 280 aaPredicted RBP1.51□□□□□ -2.17
CTF4YPR135W ARC19P33204 171 aaKnown RBP1.51□□□□□ -2.17
CTF4YPR135W SOR1P35497 357 aaKnown RBP1.51□□□□□ -2.17
CTF4YPR135W RPL32P38061 130 aaKnown RBP1.51□□□□□ -2.17
CTF4YPR135W SCO2P38072 301 aa1.51□□□□□ -2.17
CTF4YPR135W QDR3P38227 689 aa1.51□□□□□ -2.17
CTF4YPR135W TCM62P38228 572 aaKnown RBP1.51□□□□□ -2.17
CTF4YPR135W SYG1P40528 902 aa1.51□□□□□ -2.17
CTF4YPR135W CDC40P40968 455 aaPredicted RBP1.51□□□□□ -2.17
CTF4YPR135W GCN20P43535 752 aaKnown RBP1.51□□□□□ -2.17
CTF4YPR135W SNG1P46950 547 aa1.51□□□□□ -2.17
CTF4YPR135W FMP33P46998 180 aa1.51□□□□□ -2.17
CTF4YPR135W TOS2P50078 622 aa1.51□□□□□ -2.17
CTF4YPR135W PMT5P52867 743 aa1.51□□□□□ -2.17
CTF4YPR135W RSM23Q01163 450 aa1.51□□□□□ -2.17
CTF4YPR135W RRB1Q04225 511 aaKnown RBP1.51□□□□□ -2.17
CTF4YPR135W SOR2Q07786 357 aa1.51□□□□□ -2.17
CTF4YPR135W PAA1Q12447 191 aaKnown RBP1.51□□□□□ -2.17
CTF4YPR135W YOR338WQ99326 363 aa1.51□□□□□ -2.17
CTF4YPR135W STE2D6VTK4 431 aa1.51□□□□□ -2.17
CTF4YPR135W SCEIP03882 235 aa1.51□□□□□ -2.17
CTF4YPR135W RAD52P06778 471 aaKnown RBP1.51□□□□□ -2.17
CTF4YPR135W SPS4P09937 338 aa1.51□□□□□ -2.17
CTF4YPR135W RAD14P28519 371 aa1.51□□□□□ -2.17
CTF4YPR135W ARO4P32449 370 aaKnown RBP1.51□□□□□ -2.17
CTF4YPR135W ATP11P32453 318 aa1.51□□□□□ -2.17
CTF4YPR135W KAR9P32526 644 aa1.51□□□□□ -2.17
CTF4YPR135W RAD23P32628 398 aaKnown RBP1.51□□□□□ -2.17
CTF4YPR135W MGM101P32787 269 aaKnown RBP1.51□□□□□ -2.17
CTF4YPR135W KAP104P38217 918 aaKnown RBP1.51□□□□□ -2.17
CTF4YPR135W GDT1P38301 280 aaPredicted RBP1.51□□□□□ -2.17
CTF4YPR135W URA8P38627 578 aaPredicted RBP1.51□□□□□ -2.17
CTF4YPR135W LYS1P38998 373 aaRIP-Chip data1.51□□□□□ -2.17not detected
CTF4YPR135W MSS2P40990 351 aa1.51□□□□□ -2.17
CTF4YPR135W PTR3P43606 678 aa1.51□□□□□ -2.17
CTF4YPR135W TOS3P43637 560 aa1.51□□□□□ -2.17
CTF4YPR135W ASN2P49090 572 aaKnown RBP1.51□□□□□ -2.17
CTF4YPR135W NBP1P52919 319 aaPredicted RBP1.51□□□□□ -2.17
CTF4YPR135W YGR126WP53274 230 aa1.51□□□□□ -2.17
CTF4YPR135W SNZ1Q03148 297 aa1.51□□□□□ -2.17
CTF4YPR135W RRG8Q06109 277 aa1.51□□□□□ -2.17
CTF4YPR135W YLR173WQ06247 608 aa1.51□□□□□ -2.17
CTF4YPR135W TPO3Q06451 622 aa1.51□□□□□ -2.17
CTF4YPR135W ARR1Q06596 294 aa1.51□□□□□ -2.17
CTF4YPR135W SPO24Q3E752 67 aa1.51□□□□□ -2.17
CTF4YPR135W AI5_BETAQ9ZZX0 354 aa1.51□□□□□ -2.17
CTF4YPR135W GPH1P06738 902 aaKnown RBP1.5□□□□□ -2.17
CTF4YPR135W RSR1P13856 272 aa1.5□□□□□ -2.17
CTF4YPR135W HXT2P23585 541 aa1.5□□□□□ -2.17
CTF4YPR135W YPS1P32329 569 aa1.5□□□□□ -2.17
CTF4YPR135W MSN2P33748 704 aa1.5□□□□□ -2.17
CTF4YPR135W ICS2P38284 255 aa1.5□□□□□ -2.17
CTF4YPR135W YHR122WP38829 231 aa1.5□□□□□ -2.17
CTF4YPR135W RTT107P38850 1070 aa1.5□□□□□ -2.17
CTF4YPR135W PEX18P38855 283 aa1.5□□□□□ -2.17
CTF4YPR135W CIN4P39110 191 aa1.5□□□□□ -2.17
CTF4YPR135W VRG4P40107 337 aa1.5□□□□□ -2.17
CTF4YPR135W BRO1P48582 844 aa1.5□□□□□ -2.17
CTF4YPR135W PKP2P53170 491 aa1.5□□□□□ -2.17
CTF4YPR135W ERG26P53199 349 aaKnown RBP1.5□□□□□ -2.17
CTF4YPR135W BUD32P53323 261 aa1.5□□□□□ -2.17
CTF4YPR135W REX2P54964 269 aaKnown RBP1.5□□□□□ -2.17
CTF4YPR135W TIM8P57744 87 aa1.5□□□□□ -2.17
CTF4YPR135W PFA5Q03289 374 aa1.5□□□□□ -2.17
CTF4YPR135W YDR209CQ03480 137 aa1.5□□□□□ -2.17
CTF4YPR135W YMR087WQ04299 284 aa1.5□□□□□ -2.17
CTF4YPR135W TAF9Q05027 157 aa1.5□□□□□ -2.17
CTF4YPR135W PDR8Q06149 701 aa1.5□□□□□ -2.17
CTF4YPR135W ETT1Q08421 412 aaKnown RBP1.5□□□□□ -2.17
CTF4YPR135W YOR365CQ08844 703 aa1.5□□□□□ -2.17
CTF4YPR135W MED2Q12124 431 aa1.5□□□□□ -2.17
CTF4YPR135W YPR022CQ12139 1133 aa1.5□□□□□ -2.17
CTF4YPR135W YOL107WQ12239 342 aa1.5□□□□□ -2.17
CTF4YPR135W RDL1Q12305 139 aaKnown RBP1.5□□□□□ -2.17
CTF4YPR135W RNH203Q12338 110 aa1.5□□□□□ -2.17
CTF4YPR135W YIL002W-AQ3E7Z5 69 aa1.5□□□□□ -2.17
CTF4YPR135W PDE2P06776 526 aa1.5□□□□□ -2.17
CTF4YPR135W GPA1P08539 472 aa1.5□□□□□ -2.17
CTF4YPR135W MSS116P15424 664 aaKnown RBP1.5□□□□□ -2.17
CTF4YPR135W RPB8P20436 146 aa1.5□□□□□ -2.17
CTF4YPR135W APA2P22108 325 aa1.5□□□□□ -2.17
CTF4YPR135W CLB2P24869 491 aa1.5□□□□□ -2.17
CTF4YPR135W RPS2P25443 254 aaKnown RBP1.5□□□□□ -2.17
CTF4YPR135W GSY2P27472 705 aa1.5□□□□□ -2.17
CTF4YPR135W ERG1P32476 496 aaKnown RBP1.5□□□□□ -2.17
CTF4YPR135W UBC6P33296 250 aaPredicted RBP1.5□□□□□ -2.17
CTF4YPR135W FMP46P36141 133 aaKnown RBP1.5□□□□□ -2.17
CTF4YPR135W UBA4P38820 440 aa1.5□□□□□ -2.17
CTF4YPR135W FLO5P38894 1075 aa1.5□□□□□ -2.17
CTF4YPR135W YMR124WP39523 943 aaKnown RBP1.5□□□□□ -2.17
CTF4YPR135W GAT2P40209 560 aa1.5□□□□□ -2.17
CTF4YPR135W ATM1P40416 690 aa1.5□□□□□ -2.17
CTF4YPR135W PAN6P40459 309 aa1.5□□□□□ -2.17
CTF4YPR135W SAS2P40963 338 aa1.5□□□□□ -2.17
CTF4YPR135W TFG2P41896 400 aaPredicted RBP1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms