RNA–Protein interactions for RNA: YPL166W

ATG29, Transcript of Autophagy-specific protein, yeast

Gene ATG29, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG29	YPL166W	PHO84	P25297	587 aa	Known RBP	3.17	□□□□□ -1.9
ATG29	YPL166W	RDS1	P25611	832 aa		3.17	□□□□□ -1.9
ATG29	YPL166W	ADH5	P38113	351 aa	Known RBP	3.17	□□□□□ -1.9
ATG29	YPL166W	DTR1	P38125	572 aa		3.17	□□□□□ -1.9
ATG29	YPL166W	RPS14B	P39516	138 aa	Known RBP	3.17	□□□□□ -1.9
ATG29	YPL166W	RBG1	P39729	369 aa		3.17	□□□□□ -1.9
ATG29	YPL166W	RPA34	P47006	233 aa	Predicted RBP	3.17	□□□□□ -1.9
ATG29	YPL166W	RMI1	Q02685	241 aa		3.17	□□□□□ -1.9
ATG29	YPL166W	YMR310C	Q04867	317 aa	Predicted RBP	3.17	□□□□□ -1.9
ATG29	YPL166W	RLP24	Q07915	199 aa	Known RBP	3.17	□□□□□ -1.9
ATG29	YPL166W	AIM45	Q12480	344 aa	Known RBP	3.17	□□□□□ -1.9
ATG29	YPL166W	SFG1	Q12507	346 aa		3.17	□□□□□ -1.9
ATG29	YPL166W	CKI1	P20485	582 aa		3.16	□□□□□ -1.9
ATG29	YPL166W	HMX1	P32339	317 aa		3.16	□□□□□ -1.9
ATG29	YPL166W	PTK1	P36002	662 aa	Predicted RBP	3.16	□□□□□ -1.9
ATG29	YPL166W	TRM82	Q03774	444 aa		3.16	□□□□□ -1.9
ATG29	YPL166W	SLM3	Q12093	417 aa		3.16	□□□□□ -1.9
ATG29	YPL166W	FRE8	Q12209	686 aa		3.16	□□□□□ -1.9
ATG29	YPL166W	YOR012W	Q12351	137 aa		3.16	□□□□□ -1.9
ATG29	YPL166W	CFT1	Q06632	1357 aa	Known RBP	3.15	□□□□□ -1.9
ATG29	YPL166W	SPS19	P32573	292 aa	Known RBP	3.15	□□□□□ -1.91
ATG29	YPL166W	ATG7	P38862	630 aa		3.15	□□□□□ -1.91
ATG29	YPL166W	RRT13	P40042	185 aa		3.15	□□□□□ -1.91
ATG29	YPL166W	MOB2	P43563	287 aa		3.15	□□□□□ -1.91
ATG29	YPL166W	YGR067C	P53243	804 aa		3.15	□□□□□ -1.91
ATG29	YPL166W	ARF2	P19146	181 aa	Known RBP	3.14	□□□□□ -1.91
ATG29	YPL166W	MRPS5	P33759	307 aa		3.14	□□□□□ -1.91
ATG29	YPL166W	LAS1	P36146	502 aa	Predicted RBP	3.14	□□□□□ -1.91
ATG29	YPL166W	RCK2	P38623	610 aa		3.14	□□□□□ -1.91
ATG29	YPL166W	FHL1	P39521	936 aa		3.14	□□□□□ -1.91
ATG29	YPL166W	EFM3	P47163	339 aa		3.14	□□□□□ -1.91
ATG29	YPL166W	COQ5	P49017	307 aa		3.14	□□□□□ -1.91
ATG29	YPL166W	YNL143C	P53908	130 aa		3.14	□□□□□ -1.91
ATG29	YPL166W	GRX3	Q03835	250 aa		3.14	□□□□□ -1.91
ATG29	YPL166W	APC5	Q08683	685 aa		3.14	□□□□□ -1.91
ATG29	YPL166W	YOL085C	Q99345	113 aa		3.14	□□□□□ -1.91
ATG29	YPL166W	ECM5	Q03214	1411 aa		3.13	□□□□□ -1.91
ATG29	YPL166W	STE2	D6VTK4	431 aa		3.13	□□□□□ -1.91
ATG29	YPL166W	YNL320W	P42840	284 aa		3.13	□□□□□ -1.91
ATG29	YPL166W	YHC3	P47040	408 aa		3.13	□□□□□ -1.91
ATG29	YPL166W	HST1	P53685	503 aa		3.13	□□□□□ -1.91
ATG29	YPL166W	SUR7	P54003	302 aa		3.13	□□□□□ -1.91
ATG29	YPL166W	NAT4	Q04751	285 aa		3.13	□□□□□ -1.91
ATG29	YPL166W	DDC1	Q08949	612 aa		3.13	□□□□□ -1.91
ATG29	YPL166W	NFI1	Q12216	726 aa		3.13	□□□□□ -1.91
ATG29	YPL166W	NBL1	Q3E7Y6	73 aa		3.13	□□□□□ -1.91
ATG29	YPL166W	INO80	P53115	1489 aa		3.13	□□□□□ -1.91
ATG29	YPL166W	MMS22	Q06164	1454 aa		3.12	□□□□□ -1.91
ATG29	YPL166W	MXR2	P25566	168 aa		3.12	□□□□□ -1.91
ATG29	YPL166W	ZIP1	P31111	875 aa		3.12	□□□□□ -1.91
ATG29	YPL166W	FMT1	P32785	401 aa		3.12	□□□□□ -1.91
ATG29	YPL166W	IST2	P38250	946 aa		3.12	□□□□□ -1.91
ATG29	YPL166W	AQR1	P53943	586 aa		3.12	□□□□□ -1.91
ATG29	YPL166W	DBP9	Q06218	594 aa	Known RBP	3.12	□□□□□ -1.91
ATG29	YPL166W	ARR1	Q06596	294 aa		3.12	□□□□□ -1.91
ATG29	YPL166W	ALE1	Q08548	619 aa		3.12	□□□□□ -1.91
ATG29	YPL166W	SPP41	P38904	1435 aa		3.11	□□□□□ -1.91
ATG29	YPL166W	UFD4	P33202	1483 aa		3.11	□□□□□ -1.91
ATG29	YPL166W	STE3	P06783	470 aa		3.11	□□□□□ -1.91
ATG29	YPL166W	BGL2	P15703	313 aa	Known RBP	3.11	□□□□□ -1.91
ATG29	YPL166W	SAG1	P20840	650 aa		3.11	□□□□□ -1.91
ATG29	YPL166W	URA10	P30402	227 aa		3.11	□□□□□ -1.91
ATG29	YPL166W	MKK1	P32490	508 aa		3.11	□□□□□ -1.91
ATG29	YPL166W	YHR122W	P38829	231 aa		3.11	□□□□□ -1.91
ATG29	YPL166W	GGC1	P38988	300 aa		3.11	□□□□□ -1.91
ATG29	YPL166W	LSG1	P53145	640 aa	Known RBP	3.11	□□□□□ -1.91
ATG29	YPL166W	API2	Q04413	109 aa		3.11	□□□□□ -1.91
ATG29	YPL166W	CSM3	Q04659	317 aa		3.11	□□□□□ -1.91
ATG29	YPL166W	PRM7	Q12459	698 aa		3.11	□□□□□ -1.91
ATG29	YPL166W	YKL071W	P36086	256 aa		3.1	□□□□□ -1.91
ATG29	YPL166W	PCH2	P38126	564 aa		3.1	□□□□□ -1.91
ATG29	YPL166W	DSN1	P40568	576 aa		3.1	□□□□□ -1.91
ATG29	YPL166W	PFS2	P42841	465 aa	Known RBP	3.1	□□□□□ -1.91
ATG29	YPL166W	SED5	Q01590	340 aa		3.1	□□□□□ -1.91
ATG29	YPL166W	MMT2	Q08970	484 aa		3.1	□□□□□ -1.91
ATG29	YPL166W	YAL067W-A	Q8TGK6	75 aa		3.1	□□□□□ -1.91
ATG29	YPL166W	AUS1	Q08409	1394 aa		3.1	□□□□□ -1.91
ATG29	YPL166W	CHD1	P32657	1468 aa		3.09	□□□□□ -1.91
ATG29	YPL166W	UTR1	P21373	530 aa		3.09	□□□□□ -1.91
ATG29	YPL166W	HXT2	P23585	541 aa		3.09	□□□□□ -1.91
ATG29	YPL166W	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
ATG29	YPL166W	TPS2	P31688	896 aa	Known RBP	3.09	□□□□□ -1.91
ATG29	YPL166W	APE4	P38821	490 aa		3.09	□□□□□ -1.91
ATG29	YPL166W	FRT2	P39734	528 aa		3.09	□□□□□ -1.91
ATG29	YPL166W	CUE3	P53137	624 aa	Known RBP	3.09	□□□□□ -1.91
ATG29	YPL166W	PRM1	P53835	661 aa		3.09	□□□□□ -1.91
ATG29	YPL166W	SCS7	Q03529	384 aa		3.09	□□□□□ -1.91
ATG29	YPL166W	YOL029C	Q08187	201 aa		3.09	□□□□□ -1.91
ATG29	YPL166W	SLF1	Q12034	447 aa	Known RBP	3.09	□□□□□ -1.91
ATG29	YPL166W	IKI3	Q06706	1349 aa	Known RBP	3.09	□□□□□ -1.91
ATG29	YPL166W	XRN1	P22147	1528 aa	Known RBP	3.09	□□□□□ -1.92
ATG29	YPL166W	RAD23	P32628	398 aa	Known RBP	3.08	□□□□□ -1.92
ATG29	YPL166W	RPS0A	P32905	252 aa	Known RBP	3.08	□□□□□ -1.92
ATG29	YPL166W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
ATG29	YPL166W	DBP7	P36120	742 aa	Known RBP	3.08	□□□□□ -1.92
ATG29	YPL166W	SIF2	P38262	535 aa		3.08	□□□□□ -1.92
ATG29	YPL166W	YCH1	P42937	148 aa		3.08	□□□□□ -1.92
ATG29	YPL166W	NRM1	P53718	249 aa		3.08	□□□□□ -1.92
ATG29	YPL166W	MRX8	Q05473	314 aa		3.08	□□□□□ -1.92
ATG29	YPL166W	RAD1	P06777	1100 aa		3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms