RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W YLR049CQ12110 428 aa2.08□□□□□ -2.08
SEC16YPL085W PGA3Q12746 312 aaKnown RBP2.08□□□□□ -2.08
SEC16YPL085W PRE7P23724 241 aaKnown RBP2.08□□□□□ -2.08
SEC16YPL085W YJU3P28321 313 aa2.08□□□□□ -2.08
SEC16YPL085W YUH1P35127 236 aa2.08□□□□□ -2.08
SEC16YPL085W ABZ1P37254 787 aaPredicted RBP2.08□□□□□ -2.08
SEC16YPL085W ZTA1P38230 334 aaKnown RBP2.08□□□□□ -2.08
SEC16YPL085W IPI1P38803 334 aaPredicted RBP2.08□□□□□ -2.08
SEC16YPL085W BIG1P38813 335 aa2.08□□□□□ -2.08
SEC16YPL085W GIP2P40036 548 aa2.08□□□□□ -2.08
SEC16YPL085W CUP9P41817 306 aa2.08□□□□□ -2.08
SEC16YPL085W SOK2P53438 785 aaPredicted RBP2.08□□□□□ -2.08
SEC16YPL085W MRPS17Q03246 237 aaPredicted RBP2.08□□□□□ -2.08
SEC16YPL085W HOF1Q05080 669 aa2.08□□□□□ -2.08
SEC16YPL085W PUS7Q08647 676 aaKnown RBP2.08□□□□□ -2.08
SEC16YPL085W AI1P03875 834 aa2.08□□□□□ -2.08
SEC16YPL085W FUS3P16892 353 aaKnown RBP2.08□□□□□ -2.08
SEC16YPL085W YSR3P23501 404 aa2.08□□□□□ -2.08
SEC16YPL085W MEK1P24719 497 aaPredicted RBP2.08□□□□□ -2.08
SEC16YPL085W RBK1P25332 333 aa2.08□□□□□ -2.08
SEC16YPL085W SBA1P28707 216 aaKnown RBP2.08□□□□□ -2.08
SEC16YPL085W OAC1P32332 324 aa2.08□□□□□ -2.08
SEC16YPL085W GYP6P32806 458 aa2.08□□□□□ -2.08
SEC16YPL085W SIP2P34164 415 aaKnown RBP2.08□□□□□ -2.08
SEC16YPL085W GIP4P39732 760 aa2.08□□□□□ -2.08
SEC16YPL085W TOK1P40310 691 aa2.08□□□□□ -2.08
SEC16YPL085W YIL029CP40538 142 aa2.08□□□□□ -2.08
SEC16YPL085W ARF3P40994 183 aaRIP-Chip data2.08□□□□□ -2.08 RIP-Chip
SEC16YPL085W HXT14P42833 540 aa2.08□□□□□ -2.08
SEC16YPL085W ABM1P47146 123 aa2.08□□□□□ -2.08
SEC16YPL085W YPT32P51996 222 aaKnown RBP2.08□□□□□ -2.08
SEC16YPL085W TPN1P53099 579 aa2.08□□□□□ -2.08
SEC16YPL085W GPI1P53306 609 aa2.08□□□□□ -2.08
SEC16YPL085W BUD32P53323 261 aa2.08□□□□□ -2.08
SEC16YPL085W PML1Q07930 204 aaPredicted RBP2.08□□□□□ -2.08
SEC16YPL085W PSY3Q12318 242 aa2.08□□□□□ -2.08
SEC16YPL085W YBR126W-AQ8TGU7 68 aa2.08□□□□□ -2.08
SEC16YPL085W RAS2P01120 322 aaKnown RBP2.08□□□□□ -2.08
SEC16YPL085W YML003WP0CF16 290 aa2.08□□□□□ -2.08
SEC16YPL085W CAP2P13517 287 aa2.08□□□□□ -2.08
SEC16YPL085W ERD1P16151 362 aa2.08□□□□□ -2.08
SEC16YPL085W APA2P22108 325 aa2.08□□□□□ -2.08
SEC16YPL085W ERG8P24521 451 aa2.08□□□□□ -2.08
SEC16YPL085W CPR4P25334 318 aa2.08□□□□□ -2.08
SEC16YPL085W ATP11P32453 318 aa2.08□□□□□ -2.08
SEC16YPL085W PRE3P38624 215 aa2.08□□□□□ -2.08
SEC16YPL085W AIM46P38885 310 aa2.08□□□□□ -2.08
SEC16YPL085W PNT1P38969 423 aa2.08□□□□□ -2.08
SEC16YPL085W SSO2P39926 295 aa2.08□□□□□ -2.08
SEC16YPL085W SYG1P40528 902 aa2.08□□□□□ -2.08
SEC16YPL085W CDC1P40986 491 aa2.08□□□□□ -2.08
SEC16YPL085W CIN2P46670 268 aa2.08□□□□□ -2.08
SEC16YPL085W CTK2P46962 323 aa2.08□□□□□ -2.08
SEC16YPL085W UBC9P50623 157 aaPredicted RBP2.08□□□□□ -2.08
SEC16YPL085W GTF1P53260 183 aaPredicted RBP2.08□□□□□ -2.08
SEC16YPL085W YEH2Q07950 538 aa2.08□□□□□ -2.08
SEC16YPL085W YPL191CQ08930 360 aa2.08□□□□□ -2.08
SEC16YPL085W YOR289WQ12012 251 aaPredicted RBP2.08□□□□□ -2.08
SEC16YPL085W MCP1Q12106 302 aa2.08□□□□□ -2.08
SEC16YPL085W HAA1Q12753 694 aaKnown RBP2.08□□□□□ -2.08
SEC16YPL085W GLK1P17709 500 aaKnown RBP2.07□□□□□ -2.08
SEC16YPL085W PPZ1P26570 692 aa2.07□□□□□ -2.08
SEC16YPL085W MGM101P32787 269 aaKnown RBP2.07□□□□□ -2.08
SEC16YPL085W MTH1P35198 433 aa2.07□□□□□ -2.08
SEC16YPL085W YJL206CP39529 758 aa2.07□□□□□ -2.08
SEC16YPL085W YFL066CP43538 392 aa2.07□□□□□ -2.08
SEC16YPL085W YFR020WP43600 232 aa2.07□□□□□ -2.08
SEC16YPL085W NUP57P48837 541 aa2.07□□□□□ -2.08
SEC16YPL085W MNN10P50108 393 aaKnown RBP2.07□□□□□ -2.08
SEC16YPL085W BIO4P53630 237 aa2.07□□□□□ -2.08
SEC16YPL085W MPS1P54199 764 aa2.07□□□□□ -2.08
SEC16YPL085W HED1Q03937 162 aa2.07□□□□□ -2.08
SEC16YPL085W SPG3Q04398 127 aaPredicted RBP2.07□□□□□ -2.08
SEC16YPL085W RQC1Q05468 723 aaKnown RBP2.07□□□□□ -2.08
SEC16YPL085W YLR031WQ07978 186 aa2.07□□□□□ -2.08
SEC16YPL085W FEX2Q08991 375 aa2.07□□□□□ -2.08
SEC16YPL085W YDR262WQ12331 272 aa2.07□□□□□ -2.08
SEC16YPL085W MTR10Q99189 972 aa2.07□□□□□ -2.08
SEC16YPL085W TDH2P00358 332 aaKnown RBP2.07□□□□□ -2.08
SEC16YPL085W TDH3P00359 332 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
SEC16YPL085W ADH7P25377 361 aa2.07□□□□□ -2.08
SEC16YPL085W CAM1P29547 415 aaKnown RBP2.07□□□□□ -2.08
SEC16YPL085W ERG9P29704 444 aa2.07□□□□□ -2.08
SEC16YPL085W LDS1P31379 325 aa2.07□□□□□ -2.08
SEC16YPL085W SPT10P35208 640 aa2.07□□□□□ -2.08
SEC16YPL085W PPE1P38796 400 aa2.07□□□□□ -2.08
SEC16YPL085W HSP10P38910 106 aa2.07□□□□□ -2.08
SEC16YPL085W UME6P39001 836 aa2.07□□□□□ -2.08
SEC16YPL085W PHO90P39535 881 aa2.07□□□□□ -2.08
SEC16YPL085W JLP2P40206 208 aa2.07□□□□□ -2.08
SEC16YPL085W GPP1P41277 250 aaKnown RBP2.07□□□□□ -2.08
SEC16YPL085W HXT10P43581 546 aa2.07□□□□□ -2.08
SEC16YPL085W UBC12P52491 188 aa2.07□□□□□ -2.08
SEC16YPL085W VOA1P53262 265 aa2.07□□□□□ -2.08
SEC16YPL085W NUP53Q03790 475 aa2.07□□□□□ -2.08
SEC16YPL085W YPR196WQ06595 470 aa2.07□□□□□ -2.08
SEC16YPL085W YPL278CQ08990 100 aa2.07□□□□□ -2.08
SEC16YPL085W UTP10P42945 1769 aaKnown RBP2.07□□□□□ -2.08
SEC16YPL085W FLP1P03870 423 aa2.07□□□□□ -2.08
SEC16YPL085W SEN2P16658 377 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 57.9 ms