RNA–Protein interactions for RNA: YPL054W

LEE1, Transcript of Zinc-finger protein of unknown function, yeast

Gene LEE1, Length 906 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEE1	YPL054W	YPL080C	Q02826	108 aa		1.32	□□□□□ -2.2
LEE1	YPL054W	YLH47	Q06493	454 aa		1.32	□□□□□ -2.2
LEE1	YPL054W	PLB3	Q08108	686 aa		1.32	□□□□□ -2.2
LEE1	YPL054W	YDR018C	Q12185	396 aa		1.32	□□□□□ -2.2
LEE1	YPL054W	RPS14A	P06367	137 aa	Known RBP	1.31	□□□□□ -2.2
LEE1	YPL054W	TAE1	P38340	232 aa		1.31	□□□□□ -2.2
LEE1	YPL054W	RPS14B	P39516	138 aa	Known RBP	1.31	□□□□□ -2.2
LEE1	YPL054W	VPS72	Q03388	795 aa		1.31	□□□□□ -2.2
LEE1	YPL054W	ERB1	Q04660	807 aa	Known RBP	1.31	□□□□□ -2.2
LEE1	YPL054W	GTO3	Q04806	366 aa		1.31	□□□□□ -2.2
LEE1	YPL054W	DIB1	Q06819	143 aa	Predicted RBP	1.31	□□□□□ -2.2
LEE1	YPL054W	CTA1	P15202	515 aa		1.3	□□□□□ -2.2
LEE1	YPL054W	DAL81	P21657	970 aa		1.3	□□□□□ -2.2
LEE1	YPL054W	RSA4	P25382	515 aa	Known RBP	1.3	□□□□□ -2.2
LEE1	YPL054W	URA10	P30402	227 aa		1.3	□□□□□ -2.2
LEE1	YPL054W	ECM19	Q06011	112 aa		1.3	□□□□□ -2.2
LEE1	YPL054W	SHS1	Q07657	551 aa		1.3	□□□□□ -2.2
LEE1	YPL054W	TDH2	P00358	332 aa	Known RBP	1.29	□□□□□ -2.2
LEE1	YPL054W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	1.29	□□□□□ -2.2	not detected
LEE1	YPL054W	INO2	P26798	304 aa		1.29	□□□□□ -2.2
LEE1	YPL054W	PEX5	P35056	612 aa		1.29	□□□□□ -2.2
LEE1	YPL054W	YKL071W	P36086	256 aa		1.29	□□□□□ -2.2
LEE1	YPL054W	RCK1	P38622	512 aa		1.29	□□□□□ -2.2
LEE1	YPL054W	YIL054W	P40524	105 aa		1.29	□□□□□ -2.2
LEE1	YPL054W	MIC19	P43594	170 aa		1.29	□□□□□ -2.2
LEE1	YPL054W	BAT2	P47176	376 aa	Known RBP	1.29	□□□□□ -2.2
LEE1	YPL054W	TCB2	P48231	1178 aa		1.29	□□□□□ -2.2
LEE1	YPL054W	YDR541C	Q03049	344 aa		1.29	□□□□□ -2.2
LEE1	YPL054W	PEX30	Q06169	523 aa		1.29	□□□□□ -2.2
LEE1	YPL054W	NOP6	Q07623	225 aa	Known RBP	1.29	□□□□□ -2.2
LEE1	YPL054W	DFM1	Q12743	341 aa	Known RBP	1.29	□□□□□ -2.2
LEE1	YPL054W	FUR1	P18562	216 aa	Known RBP	1.28	□□□□□ -2.2
LEE1	YPL054W	MED8	P38304	223 aa		1.28	□□□□□ -2.2
LEE1	YPL054W	YFR018C	P43599	363 aa		1.28	□□□□□ -2.2
LEE1	YPL054W	YGR111W	P53265	400 aa		1.28	□□□□□ -2.2
LEE1	YPL054W	SCS7	Q03529	384 aa		1.28	□□□□□ -2.2
LEE1	YPL054W	INP1	Q03694	420 aa		1.28	□□□□□ -2.2
LEE1	YPL054W	YDR222W	Q04925	415 aa		1.28	□□□□□ -2.2
LEE1	YPL054W	NDL1	Q06568	189 aa		1.28	□□□□□ -2.2
LEE1	YPL054W	SGT2	Q12118	346 aa	Known RBP	1.28	□□□□□ -2.2
LEE1	YPL054W	RRG1	Q12167	365 aa	Predicted RBP	1.28	□□□□□ -2.2
LEE1	YPL054W	VPS63	O13549	108 aa		1.27	□□□□□ -2.21
LEE1	YPL054W	CDC31	P06704	161 aa	Known RBP	1.27	□□□□□ -2.21
LEE1	YPL054W	KRE1	P17260	313 aa		1.27	□□□□□ -2.21
LEE1	YPL054W	RPB9	P27999	122 aa		1.27	□□□□□ -2.21
LEE1	YPL054W	ITR2	P30606	609 aa		1.27	□□□□□ -2.21
LEE1	YPL054W	KAP104	P38217	918 aa	Known RBP	1.27	□□□□□ -2.21
LEE1	YPL054W	YHR182W	P38870	785 aa		1.27	□□□□□ -2.21
LEE1	YPL054W	HIT1	P46973	164 aa		1.27	□□□□□ -2.21
LEE1	YPL054W	SUR7	P54003	302 aa		1.27	□□□□□ -2.21
LEE1	YPL054W	TRM82	Q03774	444 aa		1.27	□□□□□ -2.21
LEE1	YPL054W	ALE1	Q08548	619 aa		1.27	□□□□□ -2.21
LEE1	YPL054W	UAF30	Q08747	228 aa		1.27	□□□□□ -2.21
LEE1	YPL054W	YPL264C	Q08980	353 aa		1.27	□□□□□ -2.21
LEE1	YPL054W	UBA3	Q99344	299 aa		1.27	□□□□□ -2.21
LEE1	YPL054W	ZRT3	P34240	503 aa		1.26	□□□□□ -2.21
LEE1	YPL054W	IST2	P38250	946 aa		1.26	□□□□□ -2.21
LEE1	YPL054W	ECO1	P43605	281 aa		1.26	□□□□□ -2.21
LEE1	YPL054W	CAX4	P53223	239 aa		1.26	□□□□□ -2.21
LEE1	YPL054W	YMR244W	Q04018	355 aa		1.26	□□□□□ -2.21
LEE1	YPL054W	DXO1	Q06349	442 aa		1.26	□□□□□ -2.21
LEE1	YPL054W	DCI1	Q08558	271 aa		1.26	□□□□□ -2.21
LEE1	YPL054W	RPN8	Q08723	338 aa	Known RBP	1.26	□□□□□ -2.21
LEE1	YPL054W	SLM3	Q12093	417 aa		1.26	□□□□□ -2.21
LEE1	YPL054W	MED6	P38782	295 aa		1.25	□□□□□ -2.21
LEE1	YPL054W	RRG9	P40156	214 aa		1.25	□□□□□ -2.21
LEE1	YPL054W	PCL7	P40186	285 aa		1.25	□□□□□ -2.21
LEE1	YPL054W	ZIM17	P42844	174 aa		1.25	□□□□□ -2.21
LEE1	YPL054W	YCH1	P42937	148 aa		1.25	□□□□□ -2.21
LEE1	YPL054W	YFR045W	P43617	309 aa		1.25	□□□□□ -2.21
LEE1	YPL054W	MDM1	Q01846	1127 aa		1.25	□□□□□ -2.21
LEE1	YPL054W	ARO4	P32449	370 aa	Known RBP	1.24	□□□□□ -2.21
LEE1	YPL054W	MRX4	Q12467	430 aa		1.24	□□□□□ -2.21
LEE1	YPL054W	DET1	Q99288	334 aa	Known RBP	1.24	□□□□□ -2.21
LEE1	YPL054W	INH1	P01097	85 aa		1.23	□□□□□ -2.21
LEE1	YPL054W	LTV1	P34078	463 aa		1.23	□□□□□ -2.21
LEE1	YPL054W	PCH2	P38126	564 aa		1.23	□□□□□ -2.21
LEE1	YPL054W	RRB1	Q04225	511 aa	Known RBP	1.23	□□□□□ -2.21
LEE1	YPL054W	YOR283W	Q12040	230 aa	Known RBP	1.23	□□□□□ -2.21
LEE1	YPL054W	IES3	Q12345	250 aa		1.23	□□□□□ -2.21
LEE1	YPL054W	CTM1	P38818	585 aa		1.22	□□□□□ -2.21
LEE1	YPL054W	MNL1	P38888	796 aa		1.22	□□□□□ -2.21
LEE1	YPL054W	FEX1	Q08913	375 aa		1.22	□□□□□ -2.21
LEE1	YPL054W	FEX2	Q08991	375 aa		1.22	□□□□□ -2.21
LEE1	YPL054W	ADH3	P07246	375 aa	Known RBP	1.21	□□□□□ -2.22
LEE1	YPL054W	PDX1	P16451	410 aa		1.21	□□□□□ -2.22
LEE1	YPL054W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	1.21	□□□□□ -2.22	not detected
LEE1	YPL054W	YNL320W	P42840	284 aa		1.21	□□□□□ -2.22
LEE1	YPL054W	SRB7	P47822	140 aa		1.21	□□□□□ -2.22
LEE1	YPL054W	YGL118C	P53132	145 aa		1.21	□□□□□ -2.22
LEE1	YPL054W	YNL095C	P53932	642 aa		1.21	□□□□□ -2.22
LEE1	YPL054W	MEH1	Q02205	184 aa		1.21	□□□□□ -2.22
LEE1	YPL054W	RMT2	Q03305	412 aa		1.21	□□□□□ -2.22
LEE1	YPL054W	IPK1	Q06667	281 aa		1.21	□□□□□ -2.22
LEE1	YPL054W	EFB1	P32471	206 aa	Known RBP	1.2	□□□□□ -2.22
LEE1	YPL054W	VAM7	P32912	316 aa		1.2	□□□□□ -2.22
LEE1	YPL054W	RFT1	P38206	574 aa	Predicted RBP	1.2	□□□□□ -2.22
LEE1	YPL054W	SPP381	P38282	291 aa	Predicted RBP	1.2	□□□□□ -2.22
LEE1	YPL054W	SMF2	P38778	549 aa		1.2	□□□□□ -2.22
LEE1	YPL054W	YHR177W	P38867	453 aa		1.2	□□□□□ -2.22

Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms