RNA–Protein interactions for RNA: YPL003W

ULA1, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene ULA1, Length 1,389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ULA1	YPL003W	EFM3	P47163	339 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	GNP1	P48813	663 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	TRM9	P49957	279 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	YGL101W	P53144	215 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	YGR054W	P53235	642 aa	Known RBP	4.88	□□□□□ -1.63
ULA1	YPL003W	COS1	P53822	381 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	NUP49	Q02199	472 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	YKR011C	Q02209	353 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	YDR541C	Q03049	344 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	TPP1	Q03796	238 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	YPR174C	Q06616	221 aa	Predicted RBP	4.88	□□□□□ -1.63
ULA1	YPL003W	HDA2	Q06629	674 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	YDL114W	Q07530	308 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	NTG2	Q08214	380 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	REX3	Q12090	404 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	YGK3	Q12222	375 aa	Predicted RBP	4.88	□□□□□ -1.63
ULA1	YPL003W	YDR061W	Q12298	539 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	GAL4	P04386	881 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	CAN1	P04817	590 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	CAR2	P07991	424 aa	Known RBP	4.87	□□□□□ -1.63
ULA1	YPL003W	YOL162W	P0CF19	215 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	ORC2	P32833	620 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	ARC19	P33204	171 aa	Known RBP	4.87	□□□□□ -1.63
ULA1	YPL003W	YKL077W	P36081	392 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	YPK3	P38070	525 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	BAP2	P38084	609 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	RPS20	P38701	121 aa	Known RBP	4.87	□□□□□ -1.63
ULA1	YPL003W	ECM34	P38728	170 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	ANS1	P38832	159 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	ALP1	P38971	573 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	YIL166C	P40445	542 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	ALR2	P43553	858 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	SSY5	P47002	699 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	MDE1	P47095	244 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	LYS5	P50113	272 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	SPT20	P50875	604 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	SYF2	P53277	215 aa	Predicted RBP	4.87	□□□□□ -1.63
ULA1	YPL003W	RBG2	P53295	368 aa	Known RBP	4.87	□□□□□ -1.63
ULA1	YPL003W	GRX3	Q03835	250 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	FIN1	Q03898	291 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	RRP17	Q04031	235 aa	Predicted RBP	4.87	□□□□□ -1.63
ULA1	YPL003W	MCM21	Q06675	368 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	SYO1	Q07395	620 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	SKI7	Q08491	747 aa	Predicted RBP	4.87	□□□□□ -1.63
ULA1	YPL003W	YOR389W	Q08912	624 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	UIP4	Q08926	304 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	TPO4	Q12256	659 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	IES3	Q12345	250 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	YDL007C-A	Q2V2Q0	85 aa		4.87	□□□□□ -1.63
ULA1	YPL003W	FMP27	Q06179	2628 aa		4.86	□□□□□ -1.63
ULA1	YPL003W	DPM1	P14020	267 aa	Known RBP	4.86	□□□□□ -1.63
ULA1	YPL003W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
ULA1	YPL003W	YCR006C	P25350	157 aa		4.86	□□□□□ -1.63
ULA1	YPL003W	YPT7	P32939	208 aa		4.86	□□□□□ -1.63
ULA1	YPL003W	TPO5	P36029	618 aa		4.86	□□□□□ -1.63
ULA1	YPL003W	ZRG8	P40021	1076 aa		4.86	□□□□□ -1.63
ULA1	YPL003W	JLP2	P40206	208 aa		4.86	□□□□□ -1.63
ULA1	YPL003W	YIL152W	P40455	235 aa		4.86	□□□□□ -1.63
ULA1	YPL003W	UTP25	P40498	721 aa	Known RBP	4.86	□□□□□ -1.63
ULA1	YPL003W	ASK10	P48361	1146 aa		4.86	□□□□□ -1.63
ULA1	YPL003W	TOS2	P50078	622 aa		4.86	□□□□□ -1.63
ULA1	YPL003W	COS10	P52924	374 aa		4.86	□□□□□ -1.63
ULA1	YPL003W	TPC1	P53257	314 aa		4.86	□□□□□ -1.63
ULA1	YPL003W	YGR266W	P53326	701 aa		4.86	□□□□□ -1.63
ULA1	YPL003W	NRM1	P53718	249 aa		4.86	□□□□□ -1.63
ULA1	YPL003W	BUD17	P53727	317 aa		4.86	□□□□□ -1.63
ULA1	YPL003W	MNT4	P53745	580 aa		4.86	□□□□□ -1.63
ULA1	YPL003W	SNZ1	Q03148	297 aa		4.86	□□□□□ -1.63
ULA1	YPL003W	YMR265C	Q03508	461 aa	Known RBP	4.86	□□□□□ -1.63
ULA1	YPL003W	SEC13	Q04491	297 aa	Known RBP	4.86	□□□□□ -1.63
ULA1	YPL003W	VID22	Q05934	901 aa		4.86	□□□□□ -1.63
ULA1	YPL003W	ARV1	Q06541	321 aa		4.86	□□□□□ -1.63
ULA1	YPL003W	YLR040C	Q07988	224 aa		4.86	□□□□□ -1.63
ULA1	YPL003W	GSH2	Q08220	491 aa		4.86	□□□□□ -1.63
ULA1	YPL003W	CRT10	Q08226	957 aa		4.86	□□□□□ -1.63
ULA1	YPL003W	NBA1	Q08229	501 aa	Known RBP	4.86	□□□□□ -1.63
ULA1	YPL003W	BRX1	Q08235	291 aa	Known RBP	4.86	□□□□□ -1.63
ULA1	YPL003W	YPL191C	Q08930	360 aa		4.86	□□□□□ -1.63
ULA1	YPL003W	RBD2	Q12270	262 aa		4.86	□□□□□ -1.63
ULA1	YPL003W	PSF1	Q12488	208 aa		4.86	□□□□□ -1.63
ULA1	YPL003W	DET1	Q99288	334 aa	Known RBP	4.86	□□□□□ -1.63
ULA1	YPL003W	CYR1	P08678	2026 aa	Known RBP	4.85	□□□□□ -1.63
ULA1	YPL003W	RPL20A	P0CX23	172 aa	Known RBP	4.85	□□□□□ -1.63
ULA1	YPL003W	RPL20B	P0CX24	172 aa	Predicted RBP	4.85	□□□□□ -1.63
ULA1	YPL003W	HOM3	P10869	527 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	BAR1	P12630	587 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	DIT1	P21623	536 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	GPI12	P23797	304 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	MXR2	P25566	168 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	YCR100C	P25606	316 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	SNC1	P31109	117 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	MKK2	P32491	506 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	SUR1	P33300	382 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	SNU114	P36048	1008 aa	Known RBP	4.85	□□□□□ -1.63
ULA1	YPL003W	SEA4	P38164	1038 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	YHR035W	P38769	630 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	MBP1	P39678	833 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	PZF1	P39933	429 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	GDI1	P39958	451 aa	Known RBP	4.85	□□□□□ -1.63
ULA1	YPL003W	AIM10	P39965	576 aa	Known RBP	4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms