RNA–Protein interactions for RNA: YNR010W

CSE2, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene CSE2, Length 450 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSE2	YNR010W	ZIM17	P42844	174 aa		0.73	□□□□□ -2.29
CSE2	YNR010W	MNN5	P46982	586 aa		0.73	□□□□□ -2.29
CSE2	YNR010W	RTT102	P53330	157 aa		0.73	□□□□□ -2.29
CSE2	YNR010W	SUR7	P54003	302 aa		0.73	□□□□□ -2.29
CSE2	YNR010W	GAS2	Q06135	555 aa		0.73	□□□□□ -2.29
CSE2	YNR010W	TSR2	Q06672	205 aa	Known RBP	0.73	□□□□□ -2.29
CSE2	YNR010W	RLP24	Q07915	199 aa	Known RBP	0.73	□□□□□ -2.29
CSE2	YNR010W	PLB3	Q08108	686 aa		0.73	□□□□□ -2.29
CSE2	YNR010W	AEP3	Q12089	606 aa		0.73	□□□□□ -2.29
CSE2	YNR010W	MET2	P08465	486 aa		0.72	□□□□□ -2.29
CSE2	YNR010W	SPP381	P38282	291 aa	Predicted RBP	0.72	□□□□□ -2.29
CSE2	YNR010W	MED6	P38782	295 aa		0.72	□□□□□ -2.29
CSE2	YNR010W	YER084W	P40057	128 aa		0.72	□□□□□ -2.29
CSE2	YNR010W	PCL7	P40186	285 aa		0.72	□□□□□ -2.29
CSE2	YNR010W	ERO1	Q03103	563 aa		0.72	□□□□□ -2.29
CSE2	YNR010W	TRM82	Q03774	444 aa		0.72	□□□□□ -2.29
CSE2	YNR010W	YMR244W	Q04018	355 aa		0.72	□□□□□ -2.29
CSE2	YNR010W	NDL1	Q06568	189 aa		0.72	□□□□□ -2.29
CSE2	YNR010W	YPR078C	Q06813	372 aa		0.72	□□□□□ -2.29
CSE2	YNR010W	DFM1	Q12743	341 aa	Known RBP	0.72	□□□□□ -2.29
CSE2	YNR010W	BGL2	P15703	313 aa	Known RBP	0.71	□□□□□ -2.3
CSE2	YNR010W	PDX1	P16451	410 aa		0.71	□□□□□ -2.3
CSE2	YNR010W	KRE1	P17260	313 aa		0.71	□□□□□ -2.3
CSE2	YNR010W	RRP7	P25368	297 aa	Predicted RBP	0.71	□□□□□ -2.3
CSE2	YNR010W	NOC2	P39744	710 aa	Known RBP	0.71	□□□□□ -2.3
CSE2	YNR010W	PAC11	P40960	533 aa		0.71	□□□□□ -2.3
CSE2	YNR010W	BAT2	P47176	376 aa	Known RBP	0.71	□□□□□ -2.3
CSE2	YNR010W	YPL080C	Q02826	108 aa		0.71	□□□□□ -2.3
CSE2	YNR010W	UTP15	Q04305	513 aa	Known RBP	0.71	□□□□□ -2.3
CSE2	YNR010W	YPR063C	Q12160	140 aa		0.71	□□□□□ -2.3
CSE2	YNR010W	FUR1	P18562	216 aa	Known RBP	0.7	□□□□□ -2.3
CSE2	YNR010W	FAR1	P21268	830 aa		0.7	□□□□□ -2.3
CSE2	YNR010W	TAE1	P38340	232 aa		0.7	□□□□□ -2.3
CSE2	YNR010W	MNL1	P38888	796 aa		0.7	□□□□□ -2.3
CSE2	YNR010W	BUD13	P46947	266 aa	Predicted RBP	0.7	□□□□□ -2.3
CSE2	YNR010W	ASG7	P46993	209 aa		0.7	□□□□□ -2.3
CSE2	YNR010W	YGR111W	P53265	400 aa		0.7	□□□□□ -2.3
CSE2	YNR010W	VPS72	Q03388	795 aa		0.7	□□□□□ -2.3
CSE2	YNR010W	ARR1	Q06596	294 aa		0.7	□□□□□ -2.3
CSE2	YNR010W	DIB1	Q06819	143 aa	Predicted RBP	0.7	□□□□□ -2.3
CSE2	YNR010W	RPS16A	P0CX51	143 aa	Known RBP	0.69	□□□□□ -2.3
CSE2	YNR010W	RPS16B	P0CX52	143 aa	Known RBP	0.69	□□□□□ -2.3
CSE2	YNR010W	ZRT3	P34240	503 aa		0.69	□□□□□ -2.3
CSE2	YNR010W	EFM1	P38732	585 aa		0.69	□□□□□ -2.3
CSE2	YNR010W	MLH1	P38920	769 aa		0.69	□□□□□ -2.3
CSE2	YNR010W	LCB2	P40970	561 aa		0.69	□□□□□ -2.3
CSE2	YNR010W	MOB2	P43563	287 aa		0.69	□□□□□ -2.3
CSE2	YNR010W	TPC1	P53257	314 aa		0.69	□□□□□ -2.3
CSE2	YNR010W	RMT2	Q03305	412 aa		0.69	□□□□□ -2.3
CSE2	YNR010W	INP1	Q03694	420 aa		0.69	□□□□□ -2.3
CSE2	YNR010W	CSI1	Q04368	295 aa		0.69	□□□□□ -2.3
CSE2	YNR010W	YDR114C	Q04597	100 aa		0.69	□□□□□ -2.3
CSE2	YNR010W	DXO1	Q06349	442 aa		0.69	□□□□□ -2.3
CSE2	YNR010W	YPL264C	Q08980	353 aa		0.69	□□□□□ -2.3
CSE2	YNR010W	TAF10	Q12030	206 aa		0.69	□□□□□ -2.3
CSE2	YNR010W	SGT2	Q12118	346 aa	Known RBP	0.69	□□□□□ -2.3
CSE2	YNR010W	GPM3	Q12326	303 aa		0.69	□□□□□ -2.3
CSE2	YNR010W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	0.68	□□□□□ -2.3	not detected
CSE2	YNR010W	RSA4	P25382	515 aa	Known RBP	0.68	□□□□□ -2.3
CSE2	YNR010W	SSE1	P32589	693 aa	Known RBP	0.68	□□□□□ -2.3
CSE2	YNR010W	VAM7	P32912	316 aa		0.68	□□□□□ -2.3
CSE2	YNR010W	YKR015C	P36111	568 aa		0.68	□□□□□ -2.3
CSE2	YNR010W	ATG7	P38862	630 aa		0.68	□□□□□ -2.3
CSE2	YNR010W	YDR541C	Q03049	344 aa		0.68	□□□□□ -2.3
CSE2	YNR010W	PEX30	Q06169	523 aa		0.68	□□□□□ -2.3
CSE2	YNR010W	AAD15	Q08361	143 aa		0.68	□□□□□ -2.3
CSE2	YNR010W	ALE1	Q08548	619 aa		0.68	□□□□□ -2.3
CSE2	YNR010W	DCI1	Q08558	271 aa		0.68	□□□□□ -2.3
CSE2	YNR010W	RPN6	Q12377	434 aa		0.68	□□□□□ -2.3
CSE2	YNR010W	INH1	P01097	85 aa		0.67	□□□□□ -2.3
CSE2	YNR010W	CTA1	P15202	515 aa		0.67	□□□□□ -2.3
CSE2	YNR010W	INO2	P26798	304 aa		0.67	□□□□□ -2.3
CSE2	YNR010W	ARO4	P32449	370 aa	Known RBP	0.67	□□□□□ -2.3
CSE2	YNR010W	RPN12	P32496	274 aa		0.67	□□□□□ -2.3
CSE2	YNR010W	LTV1	P34078	463 aa		0.67	□□□□□ -2.3
CSE2	YNR010W	MED8	P38304	223 aa		0.67	□□□□□ -2.3
CSE2	YNR010W	RCK1	P38622	512 aa		0.67	□□□□□ -2.3
CSE2	YNR010W	YCH1	P42937	148 aa		0.67	□□□□□ -2.3
CSE2	YNR010W	YFR018C	P43599	363 aa		0.67	□□□□□ -2.3
CSE2	YNR010W	YFR045W	P43617	309 aa		0.67	□□□□□ -2.3
CSE2	YNR010W	IPK1	Q06667	281 aa		0.67	□□□□□ -2.3
CSE2	YNR010W	SHS1	Q07657	551 aa		0.67	□□□□□ -2.3
CSE2	YNR010W	PDE2	P06776	526 aa		0.66	□□□□□ -2.3
CSE2	YNR010W	ADH3	P07246	375 aa	Known RBP	0.66	□□□□□ -2.3
CSE2	YNR010W	CDC42	P19073	191 aa		0.66	□□□□□ -2.3
CSE2	YNR010W	MRPL8	P22353	238 aa		0.66	□□□□□ -2.3
CSE2	YNR010W	MRPL20	P22354	195 aa	Predicted RBP	0.66	□□□□□ -2.3
CSE2	YNR010W	DBR1	P24309	405 aa	Known RBP	0.66	□□□□□ -2.3
CSE2	YNR010W	EPL1	P43572	832 aa		0.66	□□□□□ -2.3
CSE2	YNR010W	LSG1	P53145	640 aa	Known RBP	0.66	□□□□□ -2.3
CSE2	YNR010W	AIM33	Q04516	312 aa		0.66	□□□□□ -2.3
CSE2	YNR010W	MIM1	Q08176	113 aa		0.66	□□□□□ -2.3
CSE2	YNR010W	FEX1	Q08913	375 aa		0.66	□□□□□ -2.3
CSE2	YNR010W	FEX2	Q08991	375 aa		0.66	□□□□□ -2.3
CSE2	YNR010W	UBA3	Q99344	299 aa		0.66	□□□□□ -2.3
CSE2	YNR010W	RPL1A	P0CX43	217 aa	Known RBP	0.65	□□□□□ -2.31
CSE2	YNR010W	RPL1B	P0CX44	217 aa	Known RBP	0.65	□□□□□ -2.31
CSE2	YNR010W	URA10	P30402	227 aa		0.65	□□□□□ -2.31
CSE2	YNR010W	IST2	P38250	946 aa		0.65	□□□□□ -2.31
CSE2	YNR010W	SRP72	P38688	640 aa	Known RBP	0.65	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms