RNA–Protein interactions for RNA: YML100W

TSL1, Transcript of Large subunit of trehalose 6-phosphate synthase/phosphatase complex, yeast

Gene TSL1, Length 3,297 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSL1	YML100W	RIP1	P08067	215 aa		4.55	□□□□□ -1.68
TSL1	YML100W	URA4	P20051	364 aa		4.55	□□□□□ -1.68
TSL1	YML100W	TKL2	P33315	681 aa		4.55	□□□□□ -1.68
TSL1	YML100W	YBR032W	P38223	100 aa		4.55	□□□□□ -1.68
TSL1	YML100W	ZTA1	P38230	334 aa	Known RBP	4.55	□□□□□ -1.68
TSL1	YML100W	SOP4	P39543	234 aa	Predicted RBP	4.55	□□□□□ -1.68
TSL1	YML100W	FMP32	P43557	207 aa		4.55	□□□□□ -1.68
TSL1	YML100W	PRP24	P49960	444 aa	Known RBP	4.55	□□□□□ -1.68
TSL1	YML100W	YLR413W	Q06689	675 aa		4.55	□□□□□ -1.68
TSL1	YML100W	MUM3	Q08750	479 aa		4.55	□□□□□ -1.68
TSL1	YML100W	YLR122C	Q12312	125 aa		4.55	□□□□□ -1.68
TSL1	YML100W	BBP1	Q12365	385 aa		4.55	□□□□□ -1.68
TSL1	YML100W	RGS2	Q99188	309 aa		4.55	□□□□□ -1.68
TSL1	YML100W	GAL4	P04386	881 aa		4.54	□□□□□ -1.68
TSL1	YML100W	TUB1	P09733	447 aa	Known RBP	4.54	□□□□□ -1.68
TSL1	YML100W	ITR2	P30606	609 aa		4.54	□□□□□ -1.68
TSL1	YML100W	YBL010C	P32788	280 aa		4.54	□□□□□ -1.68
TSL1	YML100W	PTM1	P32857	523 aa		4.54	□□□□□ -1.68
TSL1	YML100W	LIP5	P32875	414 aa		4.54	□□□□□ -1.68
TSL1	YML100W	YHR210C	P38893	341 aa		4.54	□□□□□ -1.68
TSL1	YML100W	MNN9	P39107	395 aa	Known RBP	4.54	□□□□□ -1.68
TSL1	YML100W	DHH1	P39517	506 aa	Known RBP	4.54	□□□□□ -1.68
TSL1	YML100W	YAT2	P40017	923 aa		4.54	□□□□□ -1.68
TSL1	YML100W	TAF6	P53040	516 aa		4.54	□□□□□ -1.68
TSL1	YML100W	GTO3	Q04806	366 aa		4.54	□□□□□ -1.68
TSL1	YML100W	GEP3	Q08622	556 aa		4.54	□□□□□ -1.68
TSL1	YML100W	LEA1	Q08963	238 aa	Predicted RBP	4.54	□□□□□ -1.68
TSL1	YML100W	MRPL23	Q12487	163 aa	Predicted RBP	4.54	□□□□□ -1.68
TSL1	YML100W	FAB1	P34756	2278 aa		4.54	□□□□□ -1.68
TSL1	YML100W	MF(ALPHA)1	P01149	165 aa		4.54	□□□□□ -1.68
TSL1	YML100W	AAC1	P04710	309 aa		4.54	□□□□□ -1.68
TSL1	YML100W	RPL6B	P05739	176 aa	Known RBP	4.54	□□□□□ -1.68
TSL1	YML100W	CTR86	P25355	563 aa		4.54	□□□□□ -1.68
TSL1	YML100W	BUD23	P25627	275 aa	Predicted RBP	4.54	□□□□□ -1.68
TSL1	YML100W	ELF1	P36053	145 aa		4.54	□□□□□ -1.68
TSL1	YML100W	CIN5	P40917	295 aa		4.54	□□□□□ -1.68
TSL1	YML100W	YJR141W	P47172	347 aa	Predicted RBP	4.54	□□□□□ -1.68
TSL1	YML100W	NBP35	P52920	328 aa		4.54	□□□□□ -1.68
TSL1	YML100W	COX18	P53239	316 aa		4.54	□□□□□ -1.68
TSL1	YML100W	LSM3	P57743	89 aa	Known RBP	4.54	□□□□□ -1.68
TSL1	YML100W	RPL6A	Q02326	176 aa	Known RBP	4.54	□□□□□ -1.68
TSL1	YML100W	YDR248C	Q03786	193 aa		4.54	□□□□□ -1.68
TSL1	YML100W	PUS9	Q12069	462 aa		4.54	□□□□□ -1.68
TSL1	YML100W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
TSL1	YML100W	YPL247C	Q12523	523 aa		4.54	□□□□□ -1.68
TSL1	YML100W	REP1	P03871	373 aa		4.54	□□□□□ -1.68
TSL1	YML100W	GPA2	P10823	449 aa		4.54	□□□□□ -1.68
TSL1	YML100W	BOS1	P25385	244 aa		4.54	□□□□□ -1.68
TSL1	YML100W	STP2	P38704	541 aa		4.54	□□□□□ -1.68
TSL1	YML100W	TDA11	P38854	504 aa		4.54	□□□□□ -1.68
TSL1	YML100W	YER121W	P40076	114 aa		4.54	□□□□□ -1.68
TSL1	YML100W	BNA3	P47039	444 aa	Known RBP	4.54	□□□□□ -1.68
TSL1	YML100W	MMT1	Q03218	510 aa		4.54	□□□□□ -1.68
TSL1	YML100W	RIM13	Q03792	727 aa		4.54	□□□□□ -1.68
TSL1	YML100W	COA4	Q05809	96 aa		4.54	□□□□□ -1.68
TSL1	YML100W	IES3	Q12345	250 aa		4.54	□□□□□ -1.68
TSL1	YML100W	RTR2	Q12378	196 aa		4.54	□□□□□ -1.68
TSL1	YML100W	PFK27	Q12471	397 aa	Predicted RBP	4.54	□□□□□ -1.68
TSL1	YML100W	BEM2	P39960	2167 aa	Known RBP	4.53	□□□□□ -1.68
TSL1	YML100W	EXO70	P19658	623 aa		4.53	□□□□□ -1.68
TSL1	YML100W	CCA1	P21269	546 aa		4.53	□□□□□ -1.68
TSL1	YML100W	PTP1	P25044	335 aa		4.53	□□□□□ -1.68
TSL1	YML100W	GLG1	P36143	616 aa		4.53	□□□□□ -1.68
TSL1	YML100W	ARG2	P40360	574 aa		4.53	□□□□□ -1.68
TSL1	YML100W	DPB11	P47027	764 aa	Predicted RBP	4.53	□□□□□ -1.68
TSL1	YML100W	EMC2	P47133	292 aa	Known RBP	4.53	□□□□□ -1.68
TSL1	YML100W	YJR154W	P47181	346 aa		4.53	□□□□□ -1.68
TSL1	YML100W	AQR1	P53943	586 aa		4.53	□□□□□ -1.68
TSL1	YML100W	NUP116	Q02630	1113 aa		4.53	□□□□□ -1.68
TSL1	YML100W	YDR179W-A	Q03983	463 aa		4.53	□□□□□ -1.68
TSL1	YML100W	RPN6	Q12377	434 aa		4.53	□□□□□ -1.68
TSL1	YML100W	SET6	Q12529	373 aa		4.53	□□□□□ -1.68
TSL1	YML100W	STE2	D6VTK4	431 aa		4.53	□□□□□ -1.68
TSL1	YML100W	SAG1	P20840	650 aa		4.53	□□□□□ -1.68
TSL1	YML100W	GIM4	P40005	111 aa	Known RBP	4.53	□□□□□ -1.68
TSL1	YML100W	SLM1	P40485	686 aa		4.53	□□□□□ -1.68
TSL1	YML100W	CIN1	P40987	1014 aa		4.53	□□□□□ -1.68
TSL1	YML100W	COS6	P53344	381 aa		4.53	□□□□□ -1.68
TSL1	YML100W	FRE4	P53746	719 aa		4.53	□□□□□ -1.68
TSL1	YML100W	POS5	Q06892	414 aa		4.53	□□□□□ -1.68
TSL1	YML100W	NRT1	Q08485	598 aa		4.53	□□□□□ -1.68
TSL1	YML100W	PEP5	P12868	1029 aa		4.52	□□□□□ -1.69
TSL1	YML100W	CBS2	P14905	389 aa		4.52	□□□□□ -1.69
TSL1	YML100W	AAT2	P23542	418 aa	Known RBP	4.52	□□□□□ -1.69
TSL1	YML100W	DBR1	P24309	405 aa	Known RBP	4.52	□□□□□ -1.69
TSL1	YML100W	PHA2	P32452	334 aa		4.52	□□□□□ -1.69
TSL1	YML100W	FES1	P38260	290 aa		4.52	□□□□□ -1.69
TSL1	YML100W	PDS1	P40316	373 aa	Predicted RBP	4.52	□□□□□ -1.69
TSL1	YML100W	IBA57	P47158	497 aa		4.52	□□□□□ -1.69
TSL1	YML100W	CWC25	P53854	179 aa	Known RBP	4.52	□□□□□ -1.69
TSL1	YML100W	PET117	Q02771	107 aa		4.52	□□□□□ -1.69
TSL1	YML100W	CDA2	Q06703	312 aa		4.52	□□□□□ -1.69
TSL1	YML100W	CYK3	Q07533	885 aa		4.52	□□□□□ -1.69
TSL1	YML100W	OCA6	Q12454	224 aa		4.52	□□□□□ -1.69
TSL1	YML100W	SNA3	P14359	133 aa		4.52	□□□□□ -1.69
TSL1	YML100W	TSA1	P34760	196 aa	Known RBP	4.52	□□□□□ -1.69
TSL1	YML100W	TSC10	P38342	320 aa		4.52	□□□□□ -1.69
TSL1	YML100W	YHR122W	P38829	231 aa		4.52	□□□□□ -1.69
TSL1	YML100W	FAR7	P43592	221 aa		4.52	□□□□□ -1.69
TSL1	YML100W	PRY1	P47032	299 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 63.6 ms