RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C COS4P43542 379 aa2.21□□□□□ -2.06
ATG38YLR211C BUD27P43573 796 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
ATG38YLR211C VPS9P54787 451 aa2.21□□□□□ -2.06
ATG38YLR211C SLT2Q00772 484 aa2.21□□□□□ -2.06
ATG38YLR211C API2Q04413 109 aa2.21□□□□□ -2.06
ATG38YLR211C MRX8Q05473 314 aa2.21□□□□□ -2.06
ATG38YLR211C YOL029CQ08187 201 aa2.21□□□□□ -2.06
ATG38YLR211C DET1Q99288 334 aaKnown RBP2.21□□□□□ -2.06
ATG38YLR211C POT1P27796 417 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
ATG38YLR211C ZIP1P31111 875 aa2.2□□□□□ -2.06
ATG38YLR211C SMI1P32566 505 aa2.2□□□□□ -2.06
ATG38YLR211C COS9P36034 407 aa2.2□□□□□ -2.06
ATG38YLR211C YMR010WQ03687 405 aa2.2□□□□□ -2.06
ATG38YLR211C INP2Q03824 705 aa2.2□□□□□ -2.06
ATG38YLR211C VTI1Q04338 217 aa2.2□□□□□ -2.06
ATG38YLR211C YPR078CQ06813 372 aa2.2□□□□□ -2.06
ATG38YLR211C YOR338WQ99326 363 aa2.2□□□□□ -2.06
ATG38YLR211C FLO11P08640 1367 aa2.2□□□□□ -2.06
ATG38YLR211C COX10P21592 462 aa2.19□□□□□ -2.06
ATG38YLR211C PUP2P32379 260 aa2.19□□□□□ -2.06
ATG38YLR211C KAP104P38217 918 aaKnown RBP2.19□□□□□ -2.06
ATG38YLR211C EFM3P47163 339 aa2.19□□□□□ -2.06
ATG38YLR211C GAS2Q06135 555 aa2.19□□□□□ -2.06
ATG38YLR211C REX3Q12090 404 aa2.19□□□□□ -2.06
ATG38YLR211C MRPL8P22353 238 aa2.18□□□□□ -2.06
ATG38YLR211C SSE1P32589 693 aaKnown RBP2.18□□□□□ -2.06
ATG38YLR211C UFE1P41834 346 aa2.18□□□□□ -2.06
ATG38YLR211C FYV8P46949 817 aaKnown RBP2.18□□□□□ -2.06
ATG38YLR211C EOS1P53938 366 aa2.18□□□□□ -2.06
ATG38YLR211C SHS1Q07657 551 aa2.18□□□□□ -2.06
ATG38YLR211C FRE8Q12209 686 aa2.18□□□□□ -2.06
ATG38YLR211C VMA2P16140 517 aaKnown RBP2.17□□□□□ -2.06
ATG38YLR211C SKG6P32900 734 aaPredicted RBP2.17□□□□□ -2.06
ATG38YLR211C VAM7P32912 316 aa2.17□□□□□ -2.06
ATG38YLR211C TIP20P33891 701 aa2.17□□□□□ -2.06
ATG38YLR211C SIF2P38262 535 aa2.17□□□□□ -2.06
ATG38YLR211C GGC1P38988 300 aa2.17□□□□□ -2.06
ATG38YLR211C CWC22P53333 577 aaKnown RBP2.17□□□□□ -2.06
ATG38YLR211C SUR7P54003 302 aa2.17□□□□□ -2.06
ATG38YLR211C TRM82Q03774 444 aa2.17□□□□□ -2.06
ATG38YLR211C PML1Q07930 204 aaPredicted RBP2.17□□□□□ -2.06
ATG38YLR211C STE2D6VTK4 431 aa2.16□□□□□ -2.06
ATG38YLR211C DAP2P18962 818 aa2.16□□□□□ -2.06
ATG38YLR211C FAR1P21268 830 aa2.16□□□□□ -2.06
ATG38YLR211C YKR015CP36111 568 aa2.16□□□□□ -2.06
ATG38YLR211C ADH5P38113 351 aaKnown RBP2.16□□□□□ -2.06
ATG38YLR211C YSW1P38280 609 aa2.16□□□□□ -2.06
ATG38YLR211C RRF1P38771 230 aa2.16□□□□□ -2.06
ATG38YLR211C BDH1P39714 382 aa2.16□□□□□ -2.06
ATG38YLR211C NAS2P40555 220 aa2.16□□□□□ -2.06
ATG38YLR211C YJL144WP47009 104 aa2.16□□□□□ -2.06
ATG38YLR211C FAR10Q06001 478 aa2.16□□□□□ -2.06
ATG38YLR211C SPH1Q06160 661 aa2.16□□□□□ -2.06
ATG38YLR211C YDL211CQ12121 372 aa2.16□□□□□ -2.06
ATG38YLR211C YDR018CQ12185 396 aa2.16□□□□□ -2.06
ATG38YLR211C PSY3Q12318 242 aa2.16□□□□□ -2.06
ATG38YLR211C SKS1Q12505 502 aa2.16□□□□□ -2.06
ATG38YLR211C RPS16AP0CX51 143 aaKnown RBP2.15□□□□□ -2.07
ATG38YLR211C RPS16BP0CX52 143 aaKnown RBP2.15□□□□□ -2.07
ATG38YLR211C PHO84P25297 587 aaKnown RBP2.15□□□□□ -2.07
ATG38YLR211C RAD23P32628 398 aaKnown RBP2.15□□□□□ -2.07
ATG38YLR211C UIP5P36137 443 aa2.15□□□□□ -2.07
ATG38YLR211C YIL059CP40520 121 aa2.15□□□□□ -2.07
ATG38YLR211C RET3P53600 189 aa2.15□□□□□ -2.07
ATG38YLR211C YNR068CP53754 272 aa2.15□□□□□ -2.07
ATG38YLR211C MMT2Q08970 484 aa2.15□□□□□ -2.07
ATG38YLR211C RPC40P07703 335 aaKnown RBP2.14□□□□□ -2.07
ATG38YLR211C RPS23AP0CX29 145 aaKnown RBP2.14□□□□□ -2.07
ATG38YLR211C RPS23BP0CX30 145 aa2.14□□□□□ -2.07
ATG38YLR211C CKA2P19454 339 aa2.14□□□□□ -2.07
ATG38YLR211C DBR1P24309 405 aaKnown RBP2.14□□□□□ -2.07
ATG38YLR211C DAD2P36162 133 aa2.14□□□□□ -2.07
ATG38YLR211C PCL7P40186 285 aa2.14□□□□□ -2.07
ATG38YLR211C OSW5P40219 148 aa2.14□□□□□ -2.07
ATG38YLR211C LYS12P40495 371 aaKnown RBP2.14□□□□□ -2.07
ATG38YLR211C MOB2P43563 287 aa2.14□□□□□ -2.07
ATG38YLR211C CUE3P53137 624 aaKnown RBP2.14□□□□□ -2.07
ATG38YLR211C DBP9Q06218 594 aaKnown RBP2.14□□□□□ -2.07
ATG38YLR211C SAL1D6W196 494 aa2.13□□□□□ -2.07
ATG38YLR211C BGL2P15703 313 aaKnown RBP2.13□□□□□ -2.07
ATG38YLR211C SUR1P33300 382 aa2.13□□□□□ -2.07
ATG38YLR211C LCP5P40079 357 aaPredicted RBP2.13□□□□□ -2.07
ATG38YLR211C YIL089WP40500 205 aa2.13□□□□□ -2.07
ATG38YLR211C YJR030CP47101 745 aa2.13□□□□□ -2.07
ATG38YLR211C NAS6P50086 228 aa2.13□□□□□ -2.07
ATG38YLR211C MDY2Q12285 212 aa2.13□□□□□ -2.07
ATG38YLR211C SRN2Q99176 213 aa2.13□□□□□ -2.07
ATG38YLR211C UBA3Q99344 299 aa2.13□□□□□ -2.07
ATG38YLR211C RPL6BP05739 176 aaKnown RBP2.12□□□□□ -2.07
ATG38YLR211C PSO2P30620 661 aa2.12□□□□□ -2.07
ATG38YLR211C YEL043WP32618 956 aa2.12□□□□□ -2.07
ATG38YLR211C PPQ1P32945 549 aa2.12□□□□□ -2.07
ATG38YLR211C RIB7P33312 244 aa2.12□□□□□ -2.07
ATG38YLR211C SDH4P37298 181 aa2.12□□□□□ -2.07
ATG38YLR211C YMR262WP38430 313 aa2.12□□□□□ -2.07
ATG38YLR211C ATG7P38862 630 aa2.12□□□□□ -2.07
ATG38YLR211C RTT105P40063 208 aa2.12□□□□□ -2.07
ATG38YLR211C EPL1P43572 832 aa2.12□□□□□ -2.07
ATG38YLR211C SHE4P51534 789 aa2.12□□□□□ -2.07
ATG38YLR211C MLC1P53141 149 aa2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms