RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C ARF2P19146 181 aaKnown RBP1.31□□□□□ -2.2
RPL40BYKR094C ZRC1P20107 442 aa1.31□□□□□ -2.2
RPL40BYKR094C RBK1P25332 333 aa1.31□□□□□ -2.2
RPL40BYKR094C RPL16AP26784 199 aaKnown RBP1.31□□□□□ -2.2
RPL40BYKR094C CIN8P27895 1000 aa1.31□□□□□ -2.2
RPL40BYKR094C ITR2P30606 609 aa1.31□□□□□ -2.2
RPL40BYKR094C VMA5P31412 392 aaKnown RBP1.31□□□□□ -2.2
RPL40BYKR094C PHA2P32452 334 aa1.31□□□□□ -2.2
RPL40BYKR094C MYO3P36006 1272 aa1.31□□□□□ -2.2
RPL40BYKR094C ANR2P36090 516 aaPredicted RBP1.31□□□□□ -2.2
RPL40BYKR094C GPX2P38143 162 aa1.31□□□□□ -2.2
RPL40BYKR094C LIN1P38852 340 aaPredicted RBP1.31□□□□□ -2.2
RPL40BYKR094C MNN9P39107 395 aaKnown RBP1.31□□□□□ -2.2
RPL40BYKR094C FHL1P39521 936 aa1.31□□□□□ -2.2
RPL40BYKR094C SPO73P40031 143 aa1.31□□□□□ -2.2
RPL40BYKR094C YNL208WP40159 199 aaKnown RBP1.31□□□□□ -2.2
RPL40BYKR094C YNL320WP42840 284 aa1.31□□□□□ -2.2
RPL40BYKR094C IGD1P43598 195 aa1.31□□□□□ -2.2
RPL40BYKR094C MPP10P47083 593 aaKnown RBP1.31□□□□□ -2.2
RPL40BYKR094C TRF5P48561 642 aaKnown RBP1.31□□□□□ -2.2
RPL40BYKR094C VOA1P53262 265 aa1.31□□□□□ -2.2
RPL40BYKR094C YGR168CP53293 376 aa1.31□□□□□ -2.2
RPL40BYKR094C EGD1Q02642 157 aaKnown RBP1.31□□□□□ -2.2
RPL40BYKR094C ABZ2Q03266 374 aa1.31□□□□□ -2.2
RPL40BYKR094C RVB1Q03940 463 aaKnown RBP1.31□□□□□ -2.2
RPL40BYKR094C VTI1Q04338 217 aa1.31□□□□□ -2.2
RPL40BYKR094C NAT4Q04751 285 aa1.31□□□□□ -2.2
RPL40BYKR094C YLR413WQ06689 675 aa1.31□□□□□ -2.2
RPL40BYKR094C MFG1Q07684 458 aa1.31□□□□□ -2.2
RPL40BYKR094C HRT1Q08273 121 aa1.31□□□□□ -2.2
RPL40BYKR094C YPR1Q12458 312 aa1.31□□□□□ -2.2
RPL40BYKR094C SFG1Q12507 346 aa1.31□□□□□ -2.2
RPL40BYKR094C YCR024C-BQ3E7Z8 88 aa1.31□□□□□ -2.2
RPL40BYKR094C NAG1Q8TGN9 163 aa1.31□□□□□ -2.2
RPL40BYKR094C STE2D6VTK4 431 aa1.3□□□□□ -2.2
RPL40BYKR094C CKI1P20485 582 aa1.3□□□□□ -2.2
RPL40BYKR094C MXR2P25566 168 aa1.3□□□□□ -2.2
RPL40BYKR094C ICL1P28240 557 aaPredicted RBP1.3□□□□□ -2.2
RPL40BYKR094C DPH5P32469 300 aaPredicted RBP1.3□□□□□ -2.2
RPL40BYKR094C VAM7P32912 316 aa1.3□□□□□ -2.2
RPL40BYKR094C PCH2P38126 564 aa1.3□□□□□ -2.2
RPL40BYKR094C SWC5P38326 303 aa1.3□□□□□ -2.2
RPL40BYKR094C RRF1P38771 230 aa1.3□□□□□ -2.2
RPL40BYKR094C YPT35P38815 214 aaKnown RBP1.3□□□□□ -2.2
RPL40BYKR094C YHR122WP38829 231 aa1.3□□□□□ -2.2
RPL40BYKR094C CHL4P38907 458 aa1.3□□□□□ -2.2
RPL40BYKR094C FRT2P39734 528 aa1.3□□□□□ -2.2
RPL40BYKR094C RTT105P40063 208 aa1.3□□□□□ -2.2
RPL40BYKR094C LCP5P40079 357 aaPredicted RBP1.3□□□□□ -2.2
RPL40BYKR094C YMR134WP40207 237 aa1.3□□□□□ -2.2
RPL40BYKR094C MEP1P40260 492 aa1.3□□□□□ -2.2
RPL40BYKR094C AIM20P40451 204 aa1.3□□□□□ -2.2
RPL40BYKR094C KEG1P43614 200 aa1.3□□□□□ -2.2
RPL40BYKR094C LST7P53237 242 aa1.3□□□□□ -2.2
RPL40BYKR094C CLD1P53264 445 aa1.3□□□□□ -2.2
RPL40BYKR094C RRN9P53437 365 aa1.3□□□□□ -2.2
RPL40BYKR094C HCH1P53834 153 aa1.3□□□□□ -2.2
RPL40BYKR094C CAB5Q03941 241 aa1.3□□□□□ -2.2
RPL40BYKR094C VPS20Q04272 221 aa1.3□□□□□ -2.2
RPL40BYKR094C FCY22Q12119 530 aa1.3□□□□□ -2.2
RPL40BYKR094C YDR262WQ12331 272 aa1.3□□□□□ -2.2
RPL40BYKR094C DCP1Q12517 231 aaPredicted RBP1.3□□□□□ -2.2
RPL40BYKR094C UBA3Q99344 299 aa1.3□□□□□ -2.2
RPL40BYKR094C RAD7P06779 565 aa1.29□□□□□ -2.2
RPL40BYKR094C RPL18AP0CX49 186 aaKnown RBP1.29□□□□□ -2.2
RPL40BYKR094C RPL18BP0CX50 186 aaKnown RBP1.29□□□□□ -2.2
RPL40BYKR094C RPS18AP0CX55 146 aaKnown RBP1.29□□□□□ -2.2
RPL40BYKR094C RPS18BP0CX56 146 aaPredicted RBP1.29□□□□□ -2.2
RPL40BYKR094C YPS1P32329 569 aa1.29□□□□□ -2.2
RPL40BYKR094C SPO23P33757 523 aa1.29□□□□□ -2.2
RPL40BYKR094C MRPS5P33759 307 aa1.29□□□□□ -2.2
RPL40BYKR094C COS9P36034 407 aa1.29□□□□□ -2.2
RPL40BYKR094C YKR015CP36111 568 aa1.29□□□□□ -2.2
RPL40BYKR094C IML3P38265 245 aa1.29□□□□□ -2.2
RPL40BYKR094C TDA11P38854 504 aa1.29□□□□□ -2.2
RPL40BYKR094C PEX18P38855 283 aa1.29□□□□□ -2.2
RPL40BYKR094C ATG7P38862 630 aa1.29□□□□□ -2.2
RPL40BYKR094C PFS1P38872 237 aa1.29□□□□□ -2.2
RPL40BYKR094C VPS45P38932 577 aa1.29□□□□□ -2.2
RPL40BYKR094C BTT1P40314 149 aaPredicted RBP1.29□□□□□ -2.2
RPL40BYKR094C UTP25P40498 721 aaKnown RBP1.29□□□□□ -2.2
RPL40BYKR094C LOH1P47055 219 aa1.29□□□□□ -2.2
RPL40BYKR094C EMC2P47133 292 aaKnown RBP1.29□□□□□ -2.2
RPL40BYKR094C TOS2P50078 622 aa1.29□□□□□ -2.2
RPL40BYKR094C KEL2P50090 882 aa1.29□□□□□ -2.2
RPL40BYKR094C PRO2P54885 456 aaKnown RBP1.29□□□□□ -2.2
RPL40BYKR094C REX2P54964 269 aaKnown RBP1.29□□□□□ -2.2
RPL40BYKR094C TDA1Q03533 586 aa1.29□□□□□ -2.2
RPL40BYKR094C GAS2Q06135 555 aa1.29□□□□□ -2.2
RPL40BYKR094C YLH47Q06493 454 aa1.29□□□□□ -2.2
RPL40BYKR094C YDL114WQ07530 308 aa1.29□□□□□ -2.2
RPL40BYKR094C SAM4Q08985 325 aaKnown RBP1.29□□□□□ -2.2
RPL40BYKR094C YDL109CQ12103 647 aa1.29□□□□□ -2.2
RPL40BYKR094C TIR4Q12218 487 aaPredicted RBP1.29□□□□□ -2.2
RPL40BYKR094C AIM45Q12480 344 aaKnown RBP1.29□□□□□ -2.2
RPL40BYKR094C MRPL23Q12487 163 aaPredicted RBP1.29□□□□□ -2.2
RPL40BYKR094C HEM4P06174 275 aa1.28□□□□□ -2.2
RPL40BYKR094C CAR2P07991 424 aaKnown RBP1.28□□□□□ -2.2
RPL40BYKR094C RPS16AP0CX51 143 aaKnown RBP1.28□□□□□ -2.2
RPL40BYKR094C RPS16BP0CX52 143 aaKnown RBP1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms