RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOA1	YKL213C	LYS1	P38998	373 aa	RIP-Chip data	4.61	□□□□□ -1.67	not detected
DOA1	YKL213C	RPS26A	P39938	119 aa	Known RBP	4.61	□□□□□ -1.67
DOA1	YKL213C	RPS26B	P39939	119 aa	Known RBP	4.61	□□□□□ -1.67
DOA1	YKL213C	RGI1	P40043	161 aa	Predicted RBP	4.61	□□□□□ -1.67
DOA1	YKL213C	LRO1	P40345	661 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	QDR1	P40475	563 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	AZF1	P41696	914 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	IDS2	P46958	469 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	EMC2	P47133	292 aa	Known RBP	4.61	□□□□□ -1.67
DOA1	YKL213C	YJR111C	P47148	283 aa	Known RBP	4.61	□□□□□ -1.67
DOA1	YKL213C	PAC10	P48363	199 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	TIM21	P53220	239 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	ARE2	P53629	642 aa	Known RBP	4.61	□□□□□ -1.67
DOA1	YKL213C	YNL140C	P53910	189 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	MET31	Q03081	177 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	YDR239C	Q03780	787 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	FMP42	Q04991	504 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	CDA2	Q06703	312 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	FRE5	Q08908	694 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	YLR111W	Q12528	110 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	PNO1	Q99216	274 aa	Known RBP	4.61	□□□□□ -1.67
DOA1	YKL213C	PHO4	P07270	312 aa	Known RBP	4.6	□□□□□ -1.67
DOA1	YKL213C	NHP6A	P11632	93 aa	Known RBP	4.6	□□□□□ -1.67
DOA1	YKL213C	TRX3	P25372	127 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
DOA1	YKL213C	AAR2	P32357	355 aa	Predicted RBP	4.6	□□□□□ -1.67
DOA1	YKL213C	KAP122	P32767	1081 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	GSP1	P32835	219 aa	Known RBP	4.6	□□□□□ -1.67
DOA1	YKL213C	GSP2	P32836	220 aa	Known RBP	4.6	□□□□□ -1.67
DOA1	YKL213C	SKN1	P33336	771 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	YOX1	P34161	385 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	RRN10	P38204	145 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	AME1	P38313	324 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	STS1	P38637	319 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	APQ12	P40532	138 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	IDP3	P53982	420 aa	Known RBP	4.6	□□□□□ -1.67
DOA1	YKL213C	NUP116	Q02630	1113 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	IRC15	Q02733	499 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	MTQ2	Q03920	221 aa	Predicted RBP	4.6	□□□□□ -1.67
DOA1	YKL213C	ROY1	Q04847	553 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	MFG1	Q07684	458 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	SKI7	Q08491	747 aa	Predicted RBP	4.6	□□□□□ -1.67
DOA1	YKL213C	OSW1	Q08692	278 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	NMD4	Q12129	218 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	YDR262W	Q12331	272 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	JLP1	Q12358	412 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	RTN2	Q12443	393 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	PAA1	Q12447	191 aa	Known RBP	4.6	□□□□□ -1.67
DOA1	YKL213C	AGC1	Q12482	902 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	MRPL23	Q12487	163 aa	Predicted RBP	4.6	□□□□□ -1.67
DOA1	YKL213C	YBL029C-A	Q3E756	94 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	SNF6	P18888	332 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	AGP1	P25376	633 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	BUB3	P26449	341 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	ADE1	P27616	306 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	CWP1	P28319	239 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	SNU114	P36048	1008 aa	Known RBP	4.6	□□□□□ -1.67
DOA1	YKL213C	YKR078W	P36158	585 aa	Known RBP	4.6	□□□□□ -1.67
DOA1	YKL213C	CBP4	P37267	147 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	ADH5	P38113	351 aa	Known RBP	4.6	□□□□□ -1.67
DOA1	YKL213C	TRM5	P38793	499 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	PTC7	P38797	343 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	MET30	P39014	640 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	PAC1	P39946	494 aa	Known RBP	4.6	□□□□□ -1.67
DOA1	YKL213C	PDS1	P40316	373 aa	Predicted RBP	4.6	□□□□□ -1.67
DOA1	YKL213C	AYR1	P40471	297 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	PSA1	P41940	361 aa	Known RBP	4.6	□□□□□ -1.67
DOA1	YKL213C	HXT14	P42833	540 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	QRI7	P43122	407 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	AGP3	P43548	558 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	IRC7	P43623	340 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	AIM22	P47051	409 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	DUO1	P53168	247 aa	Known RBP	4.6	□□□□□ -1.67
DOA1	YKL213C	YDR476C	Q03362	224 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	RFU1	Q08003	200 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	MCH5	Q08777	521 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	CSM4	Q08955	156 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	WIP1	Q2V2P8	89 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	YIL046W-A	Q3E7Z4	54 aa		4.6	□□□□□ -1.67
DOA1	YKL213C	MET17	P06106	444 aa		4.59	□□□□□ -1.67
DOA1	YKL213C	CNB1	P25296	175 aa		4.59	□□□□□ -1.67
DOA1	YKL213C	SYP1	P25623	870 aa	Known RBP	4.59	□□□□□ -1.67
DOA1	YKL213C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
DOA1	YKL213C	FMP46	P36141	133 aa	Known RBP	4.59	□□□□□ -1.67
DOA1	YKL213C	AIM29	P36154	155 aa		4.59	□□□□□ -1.67
DOA1	YKL213C	YHR097C	P38809	366 aa	Known RBP	4.59	□□□□□ -1.67
DOA1	YKL213C	ATG7	P38862	630 aa		4.59	□□□□□ -1.67
DOA1	YKL213C	ECM10	P39987	644 aa		4.59	□□□□□ -1.67
DOA1	YKL213C	YER158C	P40095	573 aa		4.59	□□□□□ -1.67
DOA1	YKL213C	FMP32	P43557	207 aa		4.59	□□□□□ -1.67
DOA1	YKL213C	JHD2	P47156	728 aa	Predicted RBP	4.59	□□□□□ -1.67
DOA1	YKL213C	YSA1	Q01976	231 aa		4.59	□□□□□ -1.67
DOA1	YKL213C	MUS81	Q04149	632 aa	Predicted RBP	4.59	□□□□□ -1.67
DOA1	YKL213C	SNX3	Q08826	162 aa	Known RBP	4.59	□□□□□ -1.67
DOA1	YKL213C	LYS21	Q12122	440 aa	Known RBP	4.59	□□□□□ -1.67
DOA1	YKL213C	NSL1	Q12143	216 aa		4.59	□□□□□ -1.67
DOA1	YKL213C	CSF1	Q12150	2958 aa		4.59	□□□□□ -1.67
DOA1	YKL213C	YKL018C-A	Q3E7A7	99 aa		4.59	□□□□□ -1.67
DOA1	YKL213C	RAS2	P01120	322 aa	Known RBP	4.58	□□□□□ -1.68
DOA1	YKL213C	RPL6B	P05739	176 aa	Known RBP	4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms