RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W TPK2P06245 380 aa4.38□□□□□ -1.71
ABF1YKL112W PYC1P11154 1178 aaKnown RBP4.38□□□□□ -1.71
ABF1YKL112W PEP5P12868 1029 aa4.38□□□□□ -1.71
ABF1YKL112W ACO1P19414 778 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
ABF1YKL112W PEX34P25584 144 aa4.38□□□□□ -1.71
ABF1YKL112W LHP1P33399 275 aaKnown RBP4.38□□□□□ -1.71
ABF1YKL112W CRG1P38892 291 aaRIP-Chip data4.38□□□□□ -1.71not detected
ABF1YKL112W PCF11P39081 626 aaPredicted RBP4.38□□□□□ -1.71
ABF1YKL112W PHB2P50085 310 aa4.38□□□□□ -1.71
ABF1YKL112W ORC5P50874 479 aa4.38□□□□□ -1.71
ABF1YKL112W CAF40P53829 373 aa4.38□□□□□ -1.71
ABF1YKL112W COG5P53951 403 aa4.38□□□□□ -1.71
ABF1YKL112W YMR209CQ03648 457 aa4.38□□□□□ -1.71
ABF1YKL112W SNU56Q03782 492 aaKnown RBP4.38□□□□□ -1.71
ABF1YKL112W CAB5Q03941 241 aa4.38□□□□□ -1.71
ABF1YKL112W YPR078CQ06813 372 aa4.38□□□□□ -1.71
ABF1YKL112W POM33Q12164 279 aa4.38□□□□□ -1.71
ABF1YKL112W DCP1Q12517 231 aaPredicted RBP4.38□□□□□ -1.71
ABF1YKL112W MEC1P38111 2368 aa4.38□□□□□ -1.71
ABF1YKL112W POL2P21951 2222 aaKnown RBP4.38□□□□□ -1.71
ABF1YKL112W DED1P06634 604 aaKnown RBP4.38□□□□□ -1.71
ABF1YKL112W PUT1P09368 476 aa4.38□□□□□ -1.71
ABF1YKL112W RPS28BP0C0X0 67 aaKnown RBP4.38□□□□□ -1.71
ABF1YKL112W MRP1P10662 321 aaKnown RBP4.38□□□□□ -1.71
ABF1YKL112W SEC12P11655 471 aa4.38□□□□□ -1.71
ABF1YKL112W GLN3P18494 730 aa4.38□□□□□ -1.71
ABF1YKL112W RFA1P22336 621 aaKnown RBP4.38□□□□□ -1.71
ABF1YKL112W RNA14P25298 677 aaKnown RBP4.38□□□□□ -1.71
ABF1YKL112W VMA3P25515 160 aa4.38□□□□□ -1.71
ABF1YKL112W SAC1P32368 623 aaKnown RBP4.38□□□□□ -1.71
ABF1YKL112W RAD23P32628 398 aaKnown RBP4.38□□□□□ -1.71
ABF1YKL112W LST4P34239 828 aa4.38□□□□□ -1.71
ABF1YKL112W JEN1P36035 616 aa4.38□□□□□ -1.71
ABF1YKL112W YBR220CP38318 560 aa4.38□□□□□ -1.71
ABF1YKL112W MIC12P38341 106 aa4.38□□□□□ -1.71
ABF1YKL112W SRP68P38687 599 aaKnown RBP4.38□□□□□ -1.71
ABF1YKL112W LCP5P40079 357 aaPredicted RBP4.38□□□□□ -1.71
ABF1YKL112W MAM33P40513 266 aa4.38□□□□□ -1.71
ABF1YKL112W GTT1P40582 234 aa4.38□□□□□ -1.71
ABF1YKL112W HXT9P40885 567 aa4.38□□□□□ -1.71
ABF1YKL112W PAC11P40960 533 aa4.38□□□□□ -1.71
ABF1YKL112W SNG1P46950 547 aa4.38□□□□□ -1.71
ABF1YKL112W YHC3P47040 408 aa4.38□□□□□ -1.71
ABF1YKL112W YJR124CP47159 448 aa4.38□□□□□ -1.71
ABF1YKL112W YPT11P48559 417 aa4.38□□□□□ -1.71
ABF1YKL112W SOL1P50278 321 aa4.38□□□□□ -1.71
ABF1YKL112W GET1P53192 235 aa4.38□□□□□ -1.71
ABF1YKL112W MRPS35P53292 345 aa4.38□□□□□ -1.71
ABF1YKL112W HXT11P54862 567 aa4.38□□□□□ -1.71
ABF1YKL112W ARG5,6Q01217 863 aa4.38□□□□□ -1.71
ABF1YKL112W TRM82Q03774 444 aa4.38□□□□□ -1.71
ABF1YKL112W TMN2Q04562 672 aa4.38□□□□□ -1.71
ABF1YKL112W COQ9Q05779 260 aa4.38□□□□□ -1.71
ABF1YKL112W TPO3Q06451 622 aa4.38□□□□□ -1.71
ABF1YKL112W CRD1Q07560 283 aa4.38□□□□□ -1.71
ABF1YKL112W YOR214CQ12282 236 aa4.38□□□□□ -1.71
ABF1YKL112W RPS28AQ3E7X9 67 aaPredicted RBP4.38□□□□□ -1.71
ABF1YKL112W CDC21P06785 304 aa4.37□□□□□ -1.71
ABF1YKL112W MRP2P10663 115 aaPredicted RBP4.37□□□□□ -1.71
ABF1YKL112W ERD2P18414 219 aa4.37□□□□□ -1.71
ABF1YKL112W RPO26P20435 155 aa4.37□□□□□ -1.71
ABF1YKL112W YSR3P23501 404 aa4.37□□□□□ -1.71
ABF1YKL112W ADH7P25377 361 aa4.37□□□□□ -1.71
ABF1YKL112W MRP20P32387 263 aa4.37□□□□□ -1.71
ABF1YKL112W ECM25P32525 599 aa4.37□□□□□ -1.71
ABF1YKL112W TMT1P32643 299 aa4.37□□□□□ -1.71
ABF1YKL112W UGX2P32772 223 aa4.37□□□□□ -1.71
ABF1YKL112W SCD5P34758 872 aa4.37□□□□□ -1.71
ABF1YKL112W OAR1P35731 278 aa4.37□□□□□ -1.71
ABF1YKL112W SHG1P38337 142 aa4.37□□□□□ -1.71
ABF1YKL112W IMA1P53051 589 aa4.37□□□□□ -1.71
ABF1YKL112W YGR017WP53210 297 aa4.37□□□□□ -1.71
ABF1YKL112W YGR283CP53336 341 aaPredicted RBP4.37□□□□□ -1.71
ABF1YKL112W SLG1P54867 378 aa4.37□□□□□ -1.71
ABF1YKL112W YDR179W-AQ03983 463 aa4.37□□□□□ -1.71
ABF1YKL112W YDR109CQ04585 715 aa4.37□□□□□ -1.71
ABF1YKL112W YFH1Q07540 174 aa4.37□□□□□ -1.71
ABF1YKL112W HRK1Q08732 759 aaKnown RBP4.37□□□□□ -1.71
ABF1YKL112W TPT1Q12272 230 aaKnown RBP4.37□□□□□ -1.71
ABF1YKL112W EFG1Q3E705 233 aaKnown RBP4.37□□□□□ -1.71
ABF1YKL112W RGS2Q99188 309 aa4.37□□□□□ -1.71
ABF1YKL112W MRP13P12686 339 aa4.37□□□□□ -1.71
ABF1YKL112W CUP2P15315 225 aa4.37□□□□□ -1.71
ABF1YKL112W GSY2P27472 705 aa4.37□□□□□ -1.71
ABF1YKL112W HRR25P29295 494 aaKnown RBP4.37□□□□□ -1.71
ABF1YKL112W TCM62P38228 572 aaKnown RBP4.37□□□□□ -1.71
ABF1YKL112W ZTA1P38230 334 aaKnown RBP4.37□□□□□ -1.71
ABF1YKL112W SLM4P38247 162 aa4.37□□□□□ -1.71
ABF1YKL112W YHR122WP38829 231 aa4.37□□□□□ -1.71
ABF1YKL112W FAU1P40099 211 aa4.37□□□□□ -1.71
ABF1YKL112W YNL194CP40169 301 aa4.37□□□□□ -1.71
ABF1YKL112W ELO3P40319 345 aa4.37□□□□□ -1.71
ABF1YKL112W FKH2P41813 862 aa4.37□□□□□ -1.71
ABF1YKL112W GUF1P46943 645 aa4.37□□□□□ -1.71
ABF1YKL112W TAH11P47112 604 aa4.37□□□□□ -1.71
ABF1YKL112W NRK1P53915 240 aa4.37□□□□□ -1.71
ABF1YKL112W YLR460CP54007 376 aa4.37□□□□□ -1.71
ABF1YKL112W ACT1P60010 375 aaKnown RBP4.37□□□□□ -1.71
ABF1YKL112W GEP3Q08622 556 aa4.37□□□□□ -1.71
ABF1YKL112W PER33Q12144 273 aa4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 62.2 ms