RNA–Protein interactions for RNA: YGL007W

BRP1, Transcript of Dubious ORF located in the upstream region of PMA1, yeastyeast

Gene BRP1, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRP1YGL007W YJR112W-AQ3E743 109 aa1.99□□□□□ -2.09
BRP1YGL007W YBR255C-AQ3E776 120 aa1.99□□□□□ -2.09
BRP1YGL007W YCL012CQ8J0M4 134 aa1.99□□□□□ -2.09
BRP1YGL007W YER175W-AQ8TGU4 54 aa1.99□□□□□ -2.09
BRP1YGL007W RPL7AP05737 244 aaKnown RBP1.98□□□□□ -2.09
BRP1YGL007W STE7P06784 515 aa1.98□□□□□ -2.09
BRP1YGL007W YMR085WP0CF18 432 aa1.98□□□□□ -2.09
BRP1YGL007W COS2P0CX12 379 aa1.98□□□□□ -2.09
BRP1YGL007W COS3P0CX13 379 aa1.98□□□□□ -2.09
BRP1YGL007W MRP13P12686 339 aa1.98□□□□□ -2.09
BRP1YGL007W NMT1P14743 455 aa1.98□□□□□ -2.09
BRP1YGL007W MSS116P15424 664 aaKnown RBP1.98□□□□□ -2.09
BRP1YGL007W GLK1P17709 500 aaKnown RBP1.98□□□□□ -2.09
BRP1YGL007W PWP1P21304 576 aaKnown RBP1.98□□□□□ -2.09
BRP1YGL007W APN1P22936 367 aa1.98□□□□□ -2.09
BRP1YGL007W KRR1P25586 316 aaPredicted RBP1.98□□□□□ -2.09
BRP1YGL007W YCR102CP25608 368 aa1.98□□□□□ -2.09
BRP1YGL007W NAM9P27929 486 aa1.98□□□□□ -2.09
BRP1YGL007W PTR2P32901 601 aa1.98□□□□□ -2.09
BRP1YGL007W SPO23P33757 523 aa1.98□□□□□ -2.09
BRP1YGL007W CAF4P36130 643 aa1.98□□□□□ -2.09
BRP1YGL007W YCR087C-AP37263 153 aa1.98□□□□□ -2.09
BRP1YGL007W BNA4P38169 460 aa1.98□□□□□ -2.09
BRP1YGL007W UTP9P38882 575 aaKnown RBP1.98□□□□□ -2.09
BRP1YGL007W VPS52P39904 641 aa1.98□□□□□ -2.09
BRP1YGL007W FMP52P40008 231 aa1.98□□□□□ -2.09
BRP1YGL007W YIL001WP40560 513 aa1.98□□□□□ -2.09
BRP1YGL007W PHB1P40961 287 aa1.98□□□□□ -2.09
BRP1YGL007W COS4P43542 379 aa1.98□□□□□ -2.09
BRP1YGL007W YJL043WP47053 257 aa1.98□□□□□ -2.09
BRP1YGL007W STE24P47154 453 aa1.98□□□□□ -2.09
BRP1YGL007W NOP19P53317 196 aaPredicted RBP1.98□□□□□ -2.09
BRP1YGL007W YNL140CP53910 189 aa1.98□□□□□ -2.09
BRP1YGL007W IRC15Q02733 499 aa1.98□□□□□ -2.09
BRP1YGL007W MET31Q03081 177 aa1.98□□□□□ -2.09
BRP1YGL007W MSC1Q03104 513 aa1.98□□□□□ -2.09
BRP1YGL007W YDR209CQ03480 137 aa1.98□□□□□ -2.09
BRP1YGL007W NUP53Q03790 475 aa1.98□□□□□ -2.09
BRP1YGL007W RIM13Q03792 727 aa1.98□□□□□ -2.09
BRP1YGL007W ECM11Q04110 302 aa1.98□□□□□ -2.09
BRP1YGL007W YET2Q04210 160 aa1.98□□□□□ -2.09
BRP1YGL007W APC4Q04601 652 aa1.98□□□□□ -2.09
BRP1YGL007W GTB1Q04924 702 aa1.98□□□□□ -2.09
BRP1YGL007W RQC1Q05468 723 aaKnown RBP1.98□□□□□ -2.09
BRP1YGL007W RBS1Q05672 457 aaKnown RBP1.98□□□□□ -2.09
BRP1YGL007W YPR174CQ06616 221 aaPredicted RBP1.98□□□□□ -2.09
BRP1YGL007W YLR413WQ06689 675 aa1.98□□□□□ -2.09
BRP1YGL007W REX3Q12090 404 aa1.98□□□□□ -2.09
BRP1YGL007W RKI1Q12189 258 aa1.98□□□□□ -2.09
BRP1YGL007W RPL7BQ12213 244 aaKnown RBP1.98□□□□□ -2.09
BRP1YGL007W TPO4Q12256 659 aa1.98□□□□□ -2.09
BRP1YGL007W JLP1Q12358 412 aa1.98□□□□□ -2.09
BRP1YGL007W FRE6Q12473 712 aa1.98□□□□□ -2.09
BRP1YGL007W YKL018C-AQ3E7A7 99 aa1.98□□□□□ -2.09
BRP1YGL007W DYN1P36022 4092 aa1.98□□□□□ -2.09
BRP1YGL007W AAC1P04710 309 aa1.97□□□□□ -2.09
BRP1YGL007W DFR1P07807 211 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
BRP1YGL007W RAP1P11938 827 aa1.97□□□□□ -2.09
BRP1YGL007W GRR1P24814 1151 aa1.97□□□□□ -2.09
BRP1YGL007W IDH2P28241 369 aaKnown RBP1.97□□□□□ -2.09
BRP1YGL007W ZIP1P31111 875 aa1.97□□□□□ -2.09
BRP1YGL007W ATO2P32907 282 aa1.97□□□□□ -2.09
BRP1YGL007W LOS1P33418 1100 aaPredicted RBP1.97□□□□□ -2.09
BRP1YGL007W APL3P38065 1025 aa1.97□□□□□ -2.09
BRP1YGL007W YBR062CP38239 180 aa1.97□□□□□ -2.09
BRP1YGL007W OM14P38325 134 aa1.97□□□□□ -2.09
BRP1YGL007W BZZ1P38822 633 aa1.97□□□□□ -2.09
BRP1YGL007W LNP1P38878 278 aa1.97□□□□□ -2.09
BRP1YGL007W SAP1P39955 897 aaKnown RBP1.97□□□□□ -2.09
BRP1YGL007W MEP2P41948 499 aa1.97□□□□□ -2.09
BRP1YGL007W TDA10P42938 290 aa1.97□□□□□ -2.09
BRP1YGL007W SNO3P43544 222 aa1.97□□□□□ -2.09
BRP1YGL007W BPL1P48445 690 aaPredicted RBP1.97□□□□□ -2.09
BRP1YGL007W IMD4P50094 524 aaKnown RBP1.97□□□□□ -2.09
BRP1YGL007W ATG4P53867 494 aa1.97□□□□□ -2.09
BRP1YGL007W IDP3P53982 420 aaKnown RBP1.97□□□□□ -2.09
BRP1YGL007W RSM28Q03430 361 aa1.97□□□□□ -2.09
BRP1YGL007W RAD33Q04231 177 aa1.97□□□□□ -2.09
BRP1YGL007W SMA2Q04658 369 aa1.97□□□□□ -2.09
BRP1YGL007W VPS74Q06385 345 aa1.97□□□□□ -2.09
BRP1YGL007W YPR172WQ06608 200 aa1.97□□□□□ -2.09
BRP1YGL007W SWA2Q06677 668 aa1.97□□□□□ -2.09
BRP1YGL007W LUC7Q07508 261 aaPredicted RBP1.97□□□□□ -2.09
BRP1YGL007W YEH2Q07950 538 aa1.97□□□□□ -2.09
BRP1YGL007W YOL131WQ08270 108 aa1.97□□□□□ -2.09
BRP1YGL007W ESA1Q08649 445 aa1.97□□□□□ -2.09
BRP1YGL007W UAF30Q08747 228 aa1.97□□□□□ -2.09
BRP1YGL007W YOR376WQ08900 122 aa1.97□□□□□ -2.09
BRP1YGL007W YOR342CQ12182 319 aa1.97□□□□□ -2.09
BRP1YGL007W YKL068W-AQ3E826 78 aa1.97□□□□□ -2.09
BRP1YGL007W SEC16P48415 2195 aaKnown RBP1.97□□□□□ -2.09
BRP1YGL007W SLH1P53327 1967 aaKnown RBP1.96□□□□□ -2.1
BRP1YGL007W CAR1P00812 333 aaKnown RBP1.96□□□□□ -2.1
BRP1YGL007W CBP2P03874 630 aaPredicted RBP1.96□□□□□ -2.1
BRP1YGL007W CHO1P08456 276 aa1.96□□□□□ -2.1
BRP1YGL007W SSA3P09435 649 aaKnown RBP1.96□□□□□ -2.1
BRP1YGL007W RPL20AP0CX23 172 aaKnown RBP1.96□□□□□ -2.1
BRP1YGL007W RPL20BP0CX24 172 aaPredicted RBP1.96□□□□□ -2.1
BRP1YGL007W CBS2P14905 389 aa1.96□□□□□ -2.1
BRP1YGL007W PDA1P16387 420 aaKnown RBP1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms