RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C YOR365CQ08844 703 aa1.82□□□□□ -2.12
PRE4YFR050C NMD4Q12129 218 aa1.82□□□□□ -2.12
PRE4YFR050C SEM1O94742 89 aa1.81□□□□□ -2.12
PRE4YFR050C HIS1P00498 297 aaKnown RBP1.81□□□□□ -2.12
PRE4YFR050C CPA1P07258 411 aaKnown RBP1.81□□□□□ -2.12
PRE4YFR050C PEP4P07267 405 aaKnown RBP1.81□□□□□ -2.12
PRE4YFR050C YFR010W-AP0C5N0 62 aa1.81□□□□□ -2.12
PRE4YFR050C CPR1P14832 162 aaKnown RBP1.81□□□□□ -2.12
PRE4YFR050C AAC3P18238 307 aa1.81□□□□□ -2.12
PRE4YFR050C AAT2P23542 418 aaKnown RBP1.81□□□□□ -2.12
PRE4YFR050C LSM5P40089 93 aaKnown RBP1.81□□□□□ -2.12
PRE4YFR050C IDP2P41939 412 aa1.81□□□□□ -2.12
PRE4YFR050C GWT1P47026 490 aa1.81□□□□□ -2.12
PRE4YFR050C EMC2P47133 292 aaKnown RBP1.81□□□□□ -2.12
PRE4YFR050C BIO3P50277 480 aa1.81□□□□□ -2.12
PRE4YFR050C YGR066CP53242 292 aa1.81□□□□□ -2.12
PRE4YFR050C CWC22P53333 577 aaKnown RBP1.81□□□□□ -2.12
PRE4YFR050C BOR1P53838 576 aa1.81□□□□□ -2.12
PRE4YFR050C APJ1P53940 528 aa1.81□□□□□ -2.12
PRE4YFR050C ARO80Q04052 950 aa1.81□□□□□ -2.12
PRE4YFR050C YKU80Q04437 629 aa1.81□□□□□ -2.12
PRE4YFR050C SMA2Q04658 369 aa1.81□□□□□ -2.12
PRE4YFR050C VPS38Q05919 439 aa1.81□□□□□ -2.12
PRE4YFR050C RLM1Q12224 676 aa1.81□□□□□ -2.12
PRE4YFR050C BRR1Q99177 341 aaPredicted RBP1.81□□□□□ -2.12
PRE4YFR050C MES1P00958 751 aaKnown RBP1.8□□□□□ -2.12
PRE4YFR050C COR1P07256 457 aa1.8□□□□□ -2.12
PRE4YFR050C CBS1P14066 229 aa1.8□□□□□ -2.12
PRE4YFR050C HSC82P15108 705 aaKnown RBP1.8□□□□□ -2.12
PRE4YFR050C PUT3P25502 979 aaPredicted RBP1.8□□□□□ -2.12
PRE4YFR050C YCR022CP25620 114 aa1.8□□□□□ -2.12
PRE4YFR050C TCM62P38228 572 aaKnown RBP1.8□□□□□ -2.12
PRE4YFR050C STN1P38960 494 aa1.8□□□□□ -2.12
PRE4YFR050C NOP16P40007 231 aaKnown RBP1.8□□□□□ -2.12
PRE4YFR050C POP1P41812 875 aa1.8□□□□□ -2.12
PRE4YFR050C YFL067WP43537 175 aa1.8□□□□□ -2.12
PRE4YFR050C YPI1P43587 155 aa1.8□□□□□ -2.12
PRE4YFR050C DRN1P53255 507 aaKnown RBP1.8□□□□□ -2.12
PRE4YFR050C FIN1Q03898 291 aa1.8□□□□□ -2.12
PRE4YFR050C MIX14Q04341 121 aa1.8□□□□□ -2.12
PRE4YFR050C MFG1Q07684 458 aa1.8□□□□□ -2.12
PRE4YFR050C YDR056CQ12025 205 aa1.8□□□□□ -2.12
PRE4YFR050C REX3Q12090 404 aa1.8□□□□□ -2.12
PRE4YFR050C AVL9Q12500 764 aa1.8□□□□□ -2.12
PRE4YFR050C YJR112W-AQ3E743 109 aa1.8□□□□□ -2.12
PRE4YFR050C GAL3P13045 520 aa1.79□□□□□ -2.12
PRE4YFR050C RPS5P26783 225 aaKnown RBP1.79□□□□□ -2.12
PRE4YFR050C FUN19P28003 413 aaPredicted RBP1.79□□□□□ -2.12
PRE4YFR050C MSN2P33748 704 aa1.79□□□□□ -2.12
PRE4YFR050C SWH1P35845 1188 aa1.79□□□□□ -2.12
PRE4YFR050C CBP4P37267 147 aa1.79□□□□□ -2.12
PRE4YFR050C SEO1P39709 593 aa1.79□□□□□ -2.12
PRE4YFR050C AYR1P40471 297 aa1.79□□□□□ -2.12
PRE4YFR050C IRC6P43615 237 aa1.79□□□□□ -2.12
PRE4YFR050C AIM22P47051 409 aa1.79□□□□□ -2.12
PRE4YFR050C OAZ1Q02803 292 aa1.79□□□□□ -2.12
PRE4YFR050C TRM12Q04235 462 aa1.79□□□□□ -2.12
PRE4YFR050C RBS1Q05672 457 aaKnown RBP1.79□□□□□ -2.12
PRE4YFR050C HRI1Q05905 244 aaKnown RBP1.79□□□□□ -2.12
PRE4YFR050C CSI2Q08054 341 aa1.79□□□□□ -2.12
PRE4YFR050C HNT3Q08702 217 aa1.79□□□□□ -2.12
PRE4YFR050C YCL021W-AQ96VH3 125 aa1.79□□□□□ -2.12
PRE4YFR050C GCN4P03069 281 aa1.78□□□□□ -2.12
PRE4YFR050C STE3P06783 470 aa1.78□□□□□ -2.12
PRE4YFR050C DFR1P07807 211 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
PRE4YFR050C RPO26P20435 155 aa1.78□□□□□ -2.12
PRE4YFR050C IDH2P28241 369 aaKnown RBP1.78□□□□□ -2.12
PRE4YFR050C DEG1P31115 442 aaKnown RBP1.78□□□□□ -2.12
PRE4YFR050C BMH2P34730 273 aaKnown RBP1.78□□□□□ -2.12
PRE4YFR050C FRE2P36033 711 aa1.78□□□□□ -2.12
PRE4YFR050C SRO77P38163 1010 aa1.78□□□□□ -2.12
PRE4YFR050C HEK2P38199 381 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
PRE4YFR050C ECM8P38246 354 aa1.78□□□□□ -2.12
PRE4YFR050C ECM34P38728 170 aa1.78□□□□□ -2.12
PRE4YFR050C MBB1P39534 108 aa1.78□□□□□ -2.12
PRE4YFR050C ERP2P39704 215 aa1.78□□□□□ -2.12
PRE4YFR050C HAT2P39984 401 aa1.78□□□□□ -2.12
PRE4YFR050C UTP25P40498 721 aaKnown RBP1.78□□□□□ -2.12
PRE4YFR050C ICE2P40499 491 aa1.78□□□□□ -2.12
PRE4YFR050C SGN1P40561 250 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
PRE4YFR050C CPR7P47103 393 aa1.78□□□□□ -2.12
PRE4YFR050C MSO1P53604 210 aaKnown RBP1.78□□□□□ -2.12
PRE4YFR050C CAF40P53829 373 aa1.78□□□□□ -2.12
PRE4YFR050C RPA49Q01080 415 aaPredicted RBP1.78□□□□□ -2.12
PRE4YFR050C YDR239CQ03780 787 aa1.78□□□□□ -2.12
PRE4YFR050C PPM1Q04081 328 aa1.78□□□□□ -2.12
PRE4YFR050C YMR310CQ04867 317 aaPredicted RBP1.78□□□□□ -2.12
PRE4YFR050C DON1Q05610 365 aa1.78□□□□□ -2.12
PRE4YFR050C YPR022CQ12139 1133 aa1.78□□□□□ -2.12
PRE4YFR050C YPL150WQ12152 901 aa1.78□□□□□ -2.12
PRE4YFR050C AFI1Q99222 893 aa1.78□□□□□ -2.12
PRE4YFR050C JIP3O13555 125 aa1.77□□□□□ -2.13
PRE4YFR050C ILV5P06168 395 aaKnown RBP1.77□□□□□ -2.13
PRE4YFR050C LEU4P06208 619 aaKnown RBP1.77□□□□□ -2.13
PRE4YFR050C PMR1P13586 950 aa1.77□□□□□ -2.13
PRE4YFR050C OLE1P21147 510 aaKnown RBP1.77□□□□□ -2.13
PRE4YFR050C OCA4P25366 362 aa1.77□□□□□ -2.13
PRE4YFR050C DAL80P26343 269 aa1.77□□□□□ -2.13
PRE4YFR050C NDI1P32340 513 aa1.77□□□□□ -2.13
PRE4YFR050C MFT1P33441 392 aaKnown RBP1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 64.2 ms