RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C PAA1Q12447 191 aaKnown RBP1.15□□□□□ -2.22
SWI4YER111C YCR024C-BQ3E7Z8 88 aa1.15□□□□□ -2.22
SWI4YER111C DBP3P20447 523 aaKnown RBP1.15□□□□□ -2.23
SWI4YER111C RBK1P25332 333 aa1.15□□□□□ -2.23
SWI4YER111C CPR4P25334 318 aa1.15□□□□□ -2.23
SWI4YER111C YUR1P26725 428 aa1.15□□□□□ -2.23
SWI4YER111C POP5P28005 173 aa1.15□□□□□ -2.23
SWI4YER111C SPR1P32603 445 aa1.15□□□□□ -2.23
SWI4YER111C MRPS5P33759 307 aa1.15□□□□□ -2.23
SWI4YER111C RPC25P35718 212 aa1.15□□□□□ -2.23
SWI4YER111C EBP2P36049 427 aaKnown RBP1.15□□□□□ -2.23
SWI4YER111C YKL070WP36087 169 aa1.15□□□□□ -2.23
SWI4YER111C PEX18P38855 283 aa1.15□□□□□ -2.23
SWI4YER111C YNL208WP40159 199 aaKnown RBP1.15□□□□□ -2.23
SWI4YER111C UTP25P40498 721 aaKnown RBP1.15□□□□□ -2.23
SWI4YER111C YNL320WP42840 284 aa1.15□□□□□ -2.23
SWI4YER111C LCB3P47013 409 aa1.15□□□□□ -2.23
SWI4YER111C NAS6P50086 228 aa1.15□□□□□ -2.23
SWI4YER111C KEL2P50090 882 aa1.15□□□□□ -2.23
SWI4YER111C SCS3P53012 380 aa1.15□□□□□ -2.23
SWI4YER111C PXR1P53335 271 aaPredicted RBP1.15□□□□□ -2.23
SWI4YER111C YMR102CQ03177 834 aa1.15□□□□□ -2.23
SWI4YER111C YMR181CQ03231 154 aa1.15□□□□□ -2.23
SWI4YER111C ECM18Q04623 453 aa1.15□□□□□ -2.23
SWI4YER111C YLH47Q06493 454 aa1.15□□□□□ -2.23
SWI4YER111C GRS2Q06817 618 aa1.15□□□□□ -2.23
SWI4YER111C DNL4Q08387 944 aaPredicted RBP1.15□□□□□ -2.23
SWI4YER111C HMS1Q12398 434 aa1.15□□□□□ -2.23
SWI4YER111C TRP1P00912 224 aa1.14□□□□□ -2.23
SWI4YER111C HXT1P32465 570 aa1.14□□□□□ -2.23
SWI4YER111C SWD2P36104 329 aaPredicted RBP1.14□□□□□ -2.23
SWI4YER111C YIL067CP40514 678 aa1.14□□□□□ -2.23
SWI4YER111C AIM24P47127 394 aa1.14□□□□□ -2.23
SWI4YER111C YGL260WP53056 76 aa1.14□□□□□ -2.23
SWI4YER111C IBD2P53892 351 aa1.14□□□□□ -2.23
SWI4YER111C RVB1Q03940 463 aaKnown RBP1.14□□□□□ -2.23
SWI4YER111C PRM6Q04705 352 aa1.14□□□□□ -2.23
SWI4YER111C RRG8Q06109 277 aa1.14□□□□□ -2.23
SWI4YER111C VAC14Q06708 880 aa1.14□□□□□ -2.23
SWI4YER111C SMC5Q08204 1093 aa1.14□□□□□ -2.23
SWI4YER111C PCL9Q12477 304 aa1.14□□□□□ -2.23
SWI4YER111C AIM45Q12480 344 aaKnown RBP1.14□□□□□ -2.23
SWI4YER111C RRP36Q12481 300 aaPredicted RBP1.14□□□□□ -2.23
SWI4YER111C TAD3Q9URQ3 322 aa1.14□□□□□ -2.23
SWI4YER111C YSP2Q06681 1438 aa1.14□□□□□ -2.23
SWI4YER111C PAB1P04147 577 aaKnown RBP RIP-Chip data1.14□□□□□ -2.23not detected
SWI4YER111C RPS16AP0CX51 143 aaKnown RBP1.14□□□□□ -2.23
SWI4YER111C RPS16BP0CX52 143 aaKnown RBP1.14□□□□□ -2.23
SWI4YER111C UNG1P12887 359 aa1.14□□□□□ -2.23
SWI4YER111C UTR1P21373 530 aa1.14□□□□□ -2.23
SWI4YER111C ZUO1P32527 433 aaKnown RBP1.14□□□□□ -2.23
SWI4YER111C ZRT1P32804 376 aa1.14□□□□□ -2.23
SWI4YER111C MRPL10P36520 322 aa1.14□□□□□ -2.23
SWI4YER111C YBR137WP38276 179 aa1.14□□□□□ -2.23
SWI4YER111C SMF2P38778 549 aa1.14□□□□□ -2.23
SWI4YER111C PTH1P38876 190 aaKnown RBP1.14□□□□□ -2.23
SWI4YER111C SMC2P38989 1170 aaKnown RBP1.14□□□□□ -2.23
SWI4YER111C YJL070CP40361 888 aa1.14□□□□□ -2.23
SWI4YER111C KEG1P43614 200 aa1.14□□□□□ -2.23
SWI4YER111C YFR057WP43625 151 aa1.14□□□□□ -2.23
SWI4YER111C LST7P53237 242 aa1.14□□□□□ -2.23
SWI4YER111C CWC22P53333 577 aaKnown RBP1.14□□□□□ -2.23
SWI4YER111C APC4Q04601 652 aa1.14□□□□□ -2.23
SWI4YER111C RRN11Q04712 507 aa1.14□□□□□ -2.23
SWI4YER111C MDM36Q06820 579 aa1.14□□□□□ -2.23
SWI4YER111C TSR1Q07381 788 aaKnown RBP1.14□□□□□ -2.23
SWI4YER111C ESA1Q08649 445 aa1.14□□□□□ -2.23
SWI4YER111C RAX1Q08760 435 aa1.14□□□□□ -2.23
SWI4YER111C TMS1Q12116 473 aa1.14□□□□□ -2.23
SWI4YER111C FMP16Q12497 93 aa1.14□□□□□ -2.23
SWI4YER111C DET1Q99288 334 aaKnown RBP1.14□□□□□ -2.23
SWI4YER111C APC1P53886 1748 aa1.14□□□□□ -2.23
SWI4YER111C MRS3P10566 314 aa1.14□□□□□ -2.23
SWI4YER111C SPS100P13130 326 aa1.14□□□□□ -2.23
SWI4YER111C ERD1P16151 362 aa1.14□□□□□ -2.23
SWI4YER111C HEM15P16622 393 aa1.14□□□□□ -2.23
SWI4YER111C YSR3P23501 404 aa1.14□□□□□ -2.23
SWI4YER111C GPI12P23797 304 aa1.14□□□□□ -2.23
SWI4YER111C DPH5P32469 300 aaPredicted RBP1.14□□□□□ -2.23
SWI4YER111C MEI5P32489 222 aa1.14□□□□□ -2.23
SWI4YER111C ECT1P33412 323 aa1.14□□□□□ -2.23
SWI4YER111C MIX23P38162 196 aa1.14□□□□□ -2.23
SWI4YER111C YHR218WP38899 603 aa1.14□□□□□ -2.23
SWI4YER111C CCT4P39078 528 aaKnown RBP1.14□□□□□ -2.23
SWI4YER111C PRM5P40476 318 aa1.14□□□□□ -2.23
SWI4YER111C GTO1P48239 356 aa1.14□□□□□ -2.23
SWI4YER111C TAF6P53040 516 aa1.14□□□□□ -2.23
SWI4YER111C RPN14P53196 417 aa1.14□□□□□ -2.23
SWI4YER111C RPM2Q02773 1202 aa1.14□□□□□ -2.23
SWI4YER111C YPL080CQ02826 108 aa1.14□□□□□ -2.23
SWI4YER111C SPO19Q03029 223 aa1.14□□□□□ -2.23
SWI4YER111C TDA1Q03533 586 aa1.14□□□□□ -2.23
SWI4YER111C ERP1Q05359 219 aaKnown RBP1.14□□□□□ -2.23
SWI4YER111C GAS2Q06135 555 aa1.14□□□□□ -2.23
SWI4YER111C LOT6Q07923 191 aa1.14□□□□□ -2.23
SWI4YER111C ICT1Q12385 394 aa1.14□□□□□ -2.23
SWI4YER111C TFC7Q12415 435 aa1.14□□□□□ -2.23
SWI4YER111C UBA3Q99344 299 aa1.14□□□□□ -2.23
SWI4YER111C RPS14AP06367 137 aaKnown RBP1.13□□□□□ -2.23
SWI4YER111C SSA3P09435 649 aaKnown RBP1.13□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms