RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C SEC28P40509 296 aaKnown RBP1.81□□□□□ -2.12
SMB1YER029C STB1P42845 420 aa1.81□□□□□ -2.12
SMB1YER029C MOB2P43563 287 aa1.81□□□□□ -2.12
SMB1YER029C EPL1P43572 832 aa1.81□□□□□ -2.12
SMB1YER029C ZRG17P53735 605 aa1.81□□□□□ -2.12
SMB1YER029C UTP6Q02354 440 aaKnown RBP1.81□□□□□ -2.12
SMB1YER029C SXM1Q04175 944 aaKnown RBP1.81□□□□□ -2.12
SMB1YER029C PEX27Q08580 376 aa1.81□□□□□ -2.12
SMB1YER029C FAA1P30624 700 aaKnown RBP1.8□□□□□ -2.12
SMB1YER029C ADH5P38113 351 aaKnown RBP1.8□□□□□ -2.12
SMB1YER029C TRR2P38816 342 aa1.8□□□□□ -2.12
SMB1YER029C YHR182WP38870 785 aa1.8□□□□□ -2.12
SMB1YER029C SPO73P40031 143 aa1.8□□□□□ -2.12
SMB1YER029C YJR030CP47101 745 aa1.8□□□□□ -2.12
SMB1YER029C LSG1P53145 640 aaKnown RBP1.8□□□□□ -2.12
SMB1YER029C LST7P53237 242 aa1.8□□□□□ -2.12
SMB1YER029C YPR195CQ06594 109 aa1.8□□□□□ -2.12
SMB1YER029C ALE1Q08548 619 aa1.8□□□□□ -2.12
SMB1YER029C MMT2Q08970 484 aa1.8□□□□□ -2.12
SMB1YER029C FSH3Q99369 266 aa1.8□□□□□ -2.12
SMB1YER029C FUS3P16892 353 aaKnown RBP1.79□□□□□ -2.12
SMB1YER029C SRB2P34162 210 aa1.79□□□□□ -2.12
SMB1YER029C PEX5P35056 612 aa1.79□□□□□ -2.12
SMB1YER029C IST2P38250 946 aa1.79□□□□□ -2.12
SMB1YER029C GGC1P38988 300 aa1.79□□□□□ -2.12
SMB1YER029C UFE1P41834 346 aa1.79□□□□□ -2.12
SMB1YER029C YCH1P42937 148 aa1.79□□□□□ -2.12
SMB1YER029C COS4P43542 379 aa1.79□□□□□ -2.12
SMB1YER029C YNR068CP53754 272 aa1.79□□□□□ -2.12
SMB1YER029C CSM3Q04659 317 aa1.79□□□□□ -2.12
SMB1YER029C GAS2Q06135 555 aa1.79□□□□□ -2.12
SMB1YER029C YOL029CQ08187 201 aa1.79□□□□□ -2.12
SMB1YER029C YOR012WQ12351 137 aa1.79□□□□□ -2.12
SMB1YER029C COX10P21592 462 aa1.78□□□□□ -2.12
SMB1YER029C CBF5P33322 483 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
SMB1YER029C MRPS5P33759 307 aa1.78□□□□□ -2.12
SMB1YER029C JEM1P40358 645 aa1.78□□□□□ -2.12
SMB1YER029C NAS6P50086 228 aa1.78□□□□□ -2.12
SMB1YER029C RPN14P53196 417 aa1.78□□□□□ -2.12
SMB1YER029C INP2Q03824 705 aa1.78□□□□□ -2.12
SMB1YER029C SMP3Q04174 516 aa1.78□□□□□ -2.12
SMB1YER029C YOL075CQ08234 1294 aa1.78□□□□□ -2.12
SMB1YER029C RPN8Q08723 338 aaKnown RBP1.78□□□□□ -2.12
SMB1YER029C TAF10Q12030 206 aa1.78□□□□□ -2.12
SMB1YER029C RPN6Q12377 434 aa1.78□□□□□ -2.12
SMB1YER029C TFB5Q3E7C1 72 aaPredicted RBP1.78□□□□□ -2.12
SMB1YER029C FLO11P08640 1367 aa1.77□□□□□ -2.13
SMB1YER029C BGL2P15703 313 aaKnown RBP1.77□□□□□ -2.13
SMB1YER029C CKI1P20485 582 aa1.77□□□□□ -2.13
SMB1YER029C UBA1P22515 1024 aaKnown RBP1.77□□□□□ -2.13
SMB1YER029C RAD23P32628 398 aaKnown RBP1.77□□□□□ -2.13
SMB1YER029C PTK1P36002 662 aaPredicted RBP1.77□□□□□ -2.13
SMB1YER029C RXT2P38255 430 aa1.77□□□□□ -2.13
SMB1YER029C YHR122WP38829 231 aa1.77□□□□□ -2.13
SMB1YER029C BDH1P39714 382 aa1.77□□□□□ -2.13
SMB1YER029C RRG9P40156 214 aa1.77□□□□□ -2.13
SMB1YER029C PRM1P53835 661 aa1.77□□□□□ -2.13
SMB1YER029C MRX8Q05473 314 aa1.77□□□□□ -2.13
SMB1YER029C FAR10Q06001 478 aa1.77□□□□□ -2.13
SMB1YER029C APC2Q12440 853 aa1.77□□□□□ -2.13
SMB1YER029C SKS1Q12505 502 aa1.77□□□□□ -2.13
SMB1YER029C STE2D6VTK4 431 aa1.76□□□□□ -2.13
SMB1YER029C SAL1D6W196 494 aa1.76□□□□□ -2.13
SMB1YER029C CKA2P19454 339 aa1.76□□□□□ -2.13
SMB1YER029C RDS1P25611 832 aa1.76□□□□□ -2.13
SMB1YER029C ZIP1P31111 875 aa1.76□□□□□ -2.13
SMB1YER029C MKK1P32490 508 aa1.76□□□□□ -2.13
SMB1YER029C AST1P35183 429 aa1.76□□□□□ -2.13
SMB1YER029C RBG1P39729 369 aa1.76□□□□□ -2.13
SMB1YER029C SNL1P40548 159 aa1.76□□□□□ -2.13
SMB1YER029C APC4Q04601 652 aa1.76□□□□□ -2.13
SMB1YER029C DIB1Q06819 143 aaPredicted RBP1.76□□□□□ -2.13
SMB1YER029C RPL6BP05739 176 aaKnown RBP1.75□□□□□ -2.13
SMB1YER029C RAD1P06777 1100 aa1.75□□□□□ -2.13
SMB1YER029C THR4P16120 514 aaKnown RBP1.75□□□□□ -2.13
SMB1YER029C UTR1P21373 530 aa1.75□□□□□ -2.13
SMB1YER029C MXR2P25566 168 aa1.75□□□□□ -2.13
SMB1YER029C RPB9P27999 122 aa1.75□□□□□ -2.13
SMB1YER029C ERG9P29704 444 aa1.75□□□□□ -2.13
SMB1YER029C YBL028CP38202 106 aa1.75□□□□□ -2.13
SMB1YER029C PEX32P38292 413 aa1.75□□□□□ -2.13
SMB1YER029C GDT1P38301 280 aaPredicted RBP1.75□□□□□ -2.13
SMB1YER029C TAE1P38340 232 aa1.75□□□□□ -2.13
SMB1YER029C EFM1P38732 585 aa1.75□□□□□ -2.13
SMB1YER029C YIR035CP40579 254 aa1.75□□□□□ -2.13
SMB1YER029C YFR018CP43599 363 aa1.75□□□□□ -2.13
SMB1YER029C MPS2P53159 387 aa1.75□□□□□ -2.13
SMB1YER029C TPC1P53257 314 aa1.75□□□□□ -2.13
SMB1YER029C DIA1P54005 336 aa1.75□□□□□ -2.13
SMB1YER029C SMD1Q02260 146 aaPredicted RBP1.75□□□□□ -2.13
SMB1YER029C RPL6AQ02326 176 aaKnown RBP1.75□□□□□ -2.13
SMB1YER029C NAT4Q04751 285 aa1.75□□□□□ -2.13
SMB1YER029C ECM19Q06011 112 aa1.75□□□□□ -2.13
SMB1YER029C DFM1Q12743 341 aaKnown RBP1.75□□□□□ -2.13
SMB1YER029C SKG6P32900 734 aaPredicted RBP1.74□□□□□ -2.13
SMB1YER029C YHC3P47040 408 aa1.74□□□□□ -2.13
SMB1YER029C HRT1Q08273 121 aa1.74□□□□□ -2.13
SMB1YER029C YDL211CQ12121 372 aa1.74□□□□□ -2.13
SMB1YER029C FRE6Q12473 712 aa1.74□□□□□ -2.13
SMB1YER029C MAS1P10507 462 aa1.73□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms