RNA–Protein interactions for RNA: YDR494W

RSM28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM28, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM28YDR494W YJR054WP47114 497 aa2.42□□□□□ -2.02
RSM28YDR494W AQR1P53943 586 aa2.42□□□□□ -2.02
RSM28YDR494W MRX11Q03079 207 aa2.42□□□□□ -2.02
RSM28YDR494W TRM82Q03774 444 aa2.42□□□□□ -2.02
RSM28YDR494W DBP9Q06218 594 aaKnown RBP2.42□□□□□ -2.02
RSM28YDR494W APC5Q08683 685 aa2.42□□□□□ -2.02
RSM28YDR494W NBL1Q3E7Y6 73 aa2.42□□□□□ -2.02
RSM28YDR494W STE3P06783 470 aa2.41□□□□□ -2.02
RSM28YDR494W RPS19AP07280 144 aaKnown RBP2.41□□□□□ -2.02
RSM28YDR494W RPS19BP07281 144 aaPredicted RBP2.41□□□□□ -2.02
RSM28YDR494W ARF2P19146 181 aaKnown RBP2.41□□□□□ -2.02
RSM28YDR494W MRPS5P33759 307 aa2.41□□□□□ -2.02
RSM28YDR494W SMP1P38128 452 aa2.41□□□□□ -2.02
RSM28YDR494W YNL320WP42840 284 aa2.41□□□□□ -2.02
RSM28YDR494W MOB2P43563 287 aa2.41□□□□□ -2.02
RSM28YDR494W ATP22P50273 684 aaPredicted RBP2.41□□□□□ -2.02
RSM28YDR494W CUE3P53137 624 aaKnown RBP2.41□□□□□ -2.02
RSM28YDR494W RMI1Q02685 241 aa2.41□□□□□ -2.02
RSM28YDR494W NAT4Q04751 285 aa2.41□□□□□ -2.02
RSM28YDR494W PIN3Q06449 215 aa2.41□□□□□ -2.02
RSM28YDR494W ARR1Q06596 294 aa2.41□□□□□ -2.02
RSM28YDR494W SLM3Q12093 417 aa2.41□□□□□ -2.02
RSM28YDR494W FRE8Q12209 686 aa2.41□□□□□ -2.02
RSM28YDR494W TIR4Q12218 487 aaPredicted RBP2.41□□□□□ -2.02
RSM28YDR494W RAX2Q12465 1220 aa2.41□□□□□ -2.02
RSM28YDR494W SAG1P20840 650 aa2.4□□□□□ -2.03
RSM28YDR494W MXR2P25566 168 aa2.4□□□□□ -2.03
RSM28YDR494W POT1P27796 417 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
RSM28YDR494W VPH1P32563 840 aaKnown RBP2.4□□□□□ -2.03
RSM28YDR494W SHE3P38272 425 aaKnown RBP2.4□□□□□ -2.03
RSM28YDR494W RRT13P40042 185 aa2.4□□□□□ -2.03
RSM28YDR494W YHC3P47040 408 aa2.4□□□□□ -2.03
RSM28YDR494W PRM1P53835 661 aa2.4□□□□□ -2.03
RSM28YDR494W IGO1P53897 168 aa2.4□□□□□ -2.03
RSM28YDR494W STE2D6VTK4 431 aa2.39□□□□□ -2.03
RSM28YDR494W HXT2P23585 541 aa2.39□□□□□ -2.03
RSM28YDR494W MKK1P32490 508 aa2.39□□□□□ -2.03
RSM28YDR494W SPS19P32573 292 aaKnown RBP2.39□□□□□ -2.03
RSM28YDR494W DTR1P38125 572 aa2.39□□□□□ -2.03
RSM28YDR494W IST2P38250 946 aa2.39□□□□□ -2.03
RSM28YDR494W SIF2P38262 535 aa2.39□□□□□ -2.03
RSM28YDR494W RCK2P38623 610 aa2.39□□□□□ -2.03
RSM28YDR494W YHR122WP38829 231 aa2.39□□□□□ -2.03
RSM28YDR494W SUR7P54003 302 aa2.39□□□□□ -2.03
RSM28YDR494W BI3Q9ZZW7 517 aa2.39□□□□□ -2.03
RSM28YDR494W SPT7P35177 1332 aa2.39□□□□□ -2.03
RSM28YDR494W YLL053CP0CD98 152 aa2.38□□□□□ -2.03
RSM28YDR494W TAL1P15019 335 aaKnown RBP2.38□□□□□ -2.03
RSM28YDR494W URA10P30402 227 aa2.38□□□□□ -2.03
RSM28YDR494W YKL071WP36086 256 aa2.38□□□□□ -2.03
RSM28YDR494W PCH2P38126 564 aa2.38□□□□□ -2.03
RSM28YDR494W EFM3P47163 339 aa2.38□□□□□ -2.03
RSM28YDR494W LSG1P53145 640 aaKnown RBP2.38□□□□□ -2.03
RSM28YDR494W YGR067CP53243 804 aa2.38□□□□□ -2.03
RSM28YDR494W CSM3Q04659 317 aa2.38□□□□□ -2.03
RSM28YDR494W ALE1Q08548 619 aa2.38□□□□□ -2.03
RSM28YDR494W BGL2P15703 313 aaKnown RBP2.37□□□□□ -2.03
RSM28YDR494W UTR1P21373 530 aa2.37□□□□□ -2.03
RSM28YDR494W ZIP1P31111 875 aa2.37□□□□□ -2.03
RSM28YDR494W ALP1P38971 573 aa2.37□□□□□ -2.03
RSM28YDR494W GGC1P38988 300 aa2.37□□□□□ -2.03
RSM28YDR494W FHL1P39521 936 aa2.37□□□□□ -2.03
RSM28YDR494W YIL089WP40500 205 aa2.37□□□□□ -2.03
RSM28YDR494W COQ5P49017 307 aa2.37□□□□□ -2.03
RSM28YDR494W PML1Q07930 204 aaPredicted RBP2.37□□□□□ -2.03
RSM28YDR494W DDC1Q08949 612 aa2.37□□□□□ -2.03
RSM28YDR494W MMT2Q08970 484 aa2.37□□□□□ -2.03
RSM28YDR494W RGS2Q99188 309 aa2.37□□□□□ -2.03
RSM28YDR494W RAD1P06777 1100 aa2.36□□□□□ -2.03
RSM28YDR494W CIN8P27895 1000 aa2.36□□□□□ -2.03
RSM28YDR494W SMI1P32566 505 aa2.36□□□□□ -2.03
RSM28YDR494W IML3P38265 245 aa2.36□□□□□ -2.03
RSM28YDR494W PRP39P39682 629 aaKnown RBP2.36□□□□□ -2.03
RSM28YDR494W YMR134WP40207 237 aa2.36□□□□□ -2.03
RSM28YDR494W YCH1P42937 148 aa2.36□□□□□ -2.03
RSM28YDR494W HST1P53685 503 aa2.36□□□□□ -2.03
RSM28YDR494W NRM1P53718 249 aa2.36□□□□□ -2.03
RSM28YDR494W YNL146WP53906 100 aa2.36□□□□□ -2.03
RSM28YDR494W RRB1Q04225 511 aaKnown RBP2.36□□□□□ -2.03
RSM28YDR494W API2Q04413 109 aa2.36□□□□□ -2.03
RSM28YDR494W YOL029CQ08187 201 aa2.36□□□□□ -2.03
RSM28YDR494W YAL067W-AQ8TGK6 75 aa2.36□□□□□ -2.03
RSM28YDR494W YOL085CQ99345 113 aa2.36□□□□□ -2.03
RSM28YDR494W ERG9P29704 444 aa2.35□□□□□ -2.03
RSM28YDR494W YEL043WP32618 956 aa2.35□□□□□ -2.03
RSM28YDR494W PEX32P38292 413 aa2.35□□□□□ -2.03
RSM28YDR494W YGL114WP53134 725 aa2.35□□□□□ -2.03
RSM28YDR494W PDR16P53860 351 aaKnown RBP2.35□□□□□ -2.03
RSM28YDR494W SED5Q01590 340 aa2.35□□□□□ -2.03
RSM28YDR494W SCS7Q03529 384 aa2.35□□□□□ -2.03
RSM28YDR494W MRX8Q05473 314 aa2.35□□□□□ -2.03
RSM28YDR494W PSY3Q12318 242 aa2.35□□□□□ -2.03
RSM28YDR494W SPO24Q3E752 67 aa2.35□□□□□ -2.03
RSM28YDR494W AUS1Q08409 1394 aa2.35□□□□□ -2.03
RSM28YDR494W FMT1P32785 401 aa2.34□□□□□ -2.03
RSM28YDR494W MYO3P36006 1272 aa2.34□□□□□ -2.03
RSM28YDR494W DBP7P36120 742 aaKnown RBP2.34□□□□□ -2.03
RSM28YDR494W EFM1P38732 585 aa2.34□□□□□ -2.03
RSM28YDR494W HIT1P46973 164 aa2.34□□□□□ -2.03
RSM28YDR494W NAS6P50086 228 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms