RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeastyeast

Gene RUB1, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUB1YDR139C MRPS5P33759 307 aa2.75□□□□□ -1.97
RUB1YDR139C ECM34P38728 170 aa2.75□□□□□ -1.97
RUB1YDR139C ATG7P38862 630 aa2.75□□□□□ -1.97
RUB1YDR139C YER184CP39961 794 aa2.75□□□□□ -1.97
RUB1YDR139C YNL320WP42840 284 aa2.75□□□□□ -1.97
RUB1YDR139C MOB2P43563 287 aa2.75□□□□□ -1.97
RUB1YDR139C YHC3P47040 408 aa2.75□□□□□ -1.97
RUB1YDR139C AQR1P53943 586 aa2.75□□□□□ -1.97
RUB1YDR139C MRX11Q03079 207 aa2.75□□□□□ -1.97
RUB1YDR139C TRM82Q03774 444 aa2.75□□□□□ -1.97
RUB1YDR139C APC5Q08683 685 aa2.75□□□□□ -1.97
RUB1YDR139C FRE8Q12209 686 aa2.75□□□□□ -1.97
RUB1YDR139C STE3P06783 470 aa2.74□□□□□ -1.97
RUB1YDR139C POT1P27796 417 aaKnown RBP RIP-Chip data2.74□□□□□ -1.97not detected
RUB1YDR139C SMP1P38128 452 aa2.74□□□□□ -1.97
RUB1YDR139C IST2P38250 946 aa2.74□□□□□ -1.97
RUB1YDR139C YHR122WP38829 231 aa2.74□□□□□ -1.97
RUB1YDR139C STB1P42845 420 aa2.74□□□□□ -1.97
RUB1YDR139C EFM3P47163 339 aa2.74□□□□□ -1.97
RUB1YDR139C PRM1P53835 661 aa2.74□□□□□ -1.97
RUB1YDR139C RMI1Q02685 241 aa2.74□□□□□ -1.97
RUB1YDR139C NAT4Q04751 285 aa2.74□□□□□ -1.97
RUB1YDR139C RPS14AP06367 137 aaKnown RBP2.73□□□□□ -1.97
RUB1YDR139C SAG1P20840 650 aa2.73□□□□□ -1.97
RUB1YDR139C MXR2P25566 168 aa2.73□□□□□ -1.97
RUB1YDR139C VPH1P32563 840 aaKnown RBP2.73□□□□□ -1.97
RUB1YDR139C SPS19P32573 292 aaKnown RBP2.73□□□□□ -1.97
RUB1YDR139C DTR1P38125 572 aa2.73□□□□□ -1.97
RUB1YDR139C SIF2P38262 535 aa2.73□□□□□ -1.97
RUB1YDR139C RCK2P38623 610 aa2.73□□□□□ -1.97
RUB1YDR139C RPS14BP39516 138 aaKnown RBP2.73□□□□□ -1.97
RUB1YDR139C ATP22P50273 684 aaPredicted RBP2.73□□□□□ -1.97
RUB1YDR139C CUE3P53137 624 aaKnown RBP2.73□□□□□ -1.97
RUB1YDR139C SUR7P54003 302 aa2.73□□□□□ -1.97
RUB1YDR139C RRB1Q04225 511 aaKnown RBP2.73□□□□□ -1.97
RUB1YDR139C CSM3Q04659 317 aa2.73□□□□□ -1.97
RUB1YDR139C ARR1Q06596 294 aa2.73□□□□□ -1.97
RUB1YDR139C ALE1Q08548 619 aa2.73□□□□□ -1.97
RUB1YDR139C TIR4Q12218 487 aaPredicted RBP2.73□□□□□ -1.97
RUB1YDR139C SPT7P35177 1332 aa2.72□□□□□ -1.97
RUB1YDR139C MKK1P32490 508 aa2.72□□□□□ -1.97
RUB1YDR139C RRT13P40042 185 aa2.72□□□□□ -1.97
RUB1YDR139C YMR134WP40207 237 aa2.72□□□□□ -1.97
RUB1YDR139C LSG1P53145 640 aaKnown RBP2.72□□□□□ -1.97
RUB1YDR139C YGR067CP53243 804 aa2.72□□□□□ -1.97
RUB1YDR139C STE2D6VTK4 431 aa2.71□□□□□ -1.98
RUB1YDR139C TAL1P15019 335 aaKnown RBP2.71□□□□□ -1.98
RUB1YDR139C HXT2P23585 541 aa2.71□□□□□ -1.98
RUB1YDR139C ERG9P29704 444 aa2.71□□□□□ -1.98
RUB1YDR139C URA10P30402 227 aa2.71□□□□□ -1.98
RUB1YDR139C YEL043WP32618 956 aa2.71□□□□□ -1.98
RUB1YDR139C PCH2P38126 564 aa2.71□□□□□ -1.98
RUB1YDR139C PEX32P38292 413 aa2.71□□□□□ -1.98
RUB1YDR139C COQ5P49017 307 aa2.71□□□□□ -1.98
RUB1YDR139C APJ1P53940 528 aa2.71□□□□□ -1.98
RUB1YDR139C RGS2Q99188 309 aa2.71□□□□□ -1.98
RUB1YDR139C YOL085CQ99345 113 aa2.71□□□□□ -1.98
RUB1YDR139C YLL053CP0CD98 152 aa2.7□□□□□ -1.98
RUB1YDR139C BGL2P15703 313 aaKnown RBP2.7□□□□□ -1.98
RUB1YDR139C UTR1P21373 530 aa2.7□□□□□ -1.98
RUB1YDR139C YKL071WP36086 256 aa2.7□□□□□ -1.98
RUB1YDR139C ALP1P38971 573 aa2.7□□□□□ -1.98
RUB1YDR139C GGC1P38988 300 aa2.7□□□□□ -1.98
RUB1YDR139C FHL1P39521 936 aa2.7□□□□□ -1.98
RUB1YDR139C PDR16P53860 351 aaKnown RBP2.7□□□□□ -1.98
RUB1YDR139C SED5Q01590 340 aa2.7□□□□□ -1.98
RUB1YDR139C API2Q04413 109 aa2.7□□□□□ -1.98
RUB1YDR139C DDC1Q08949 612 aa2.7□□□□□ -1.98
RUB1YDR139C MMT2Q08970 484 aa2.7□□□□□ -1.98
RUB1YDR139C RAD1P06777 1100 aa2.69□□□□□ -1.98
RUB1YDR139C ZIP1P31111 875 aa2.69□□□□□ -1.98
RUB1YDR139C PRP39P39682 629 aaKnown RBP2.69□□□□□ -1.98
RUB1YDR139C YIL089WP40500 205 aa2.69□□□□□ -1.98
RUB1YDR139C YCH1P42937 148 aa2.69□□□□□ -1.98
RUB1YDR139C HST1P53685 503 aa2.69□□□□□ -1.98
RUB1YDR139C YNL146WP53906 100 aa2.69□□□□□ -1.98
RUB1YDR139C SCS7Q03529 384 aa2.69□□□□□ -1.98
RUB1YDR139C PML1Q07930 204 aaPredicted RBP2.69□□□□□ -1.98
RUB1YDR139C RPN8Q08723 338 aaKnown RBP2.69□□□□□ -1.98
RUB1YDR139C CIN8P27895 1000 aa2.68□□□□□ -1.98
RUB1YDR139C SMI1P32566 505 aa2.68□□□□□ -1.98
RUB1YDR139C UIP5P36137 443 aa2.68□□□□□ -1.98
RUB1YDR139C IML3P38265 245 aa2.68□□□□□ -1.98
RUB1YDR139C EFM1P38732 585 aa2.68□□□□□ -1.98
RUB1YDR139C NRM1P53718 249 aa2.68□□□□□ -1.98
RUB1YDR139C PSY3Q12318 242 aa2.68□□□□□ -1.98
RUB1YDR139C RPN6Q12377 434 aa2.68□□□□□ -1.98
RUB1YDR139C YAL067W-AQ8TGK6 75 aa2.68□□□□□ -1.98
RUB1YDR139C AUS1Q08409 1394 aa2.67□□□□□ -1.98
RUB1YDR139C DCC1P25559 380 aa2.67□□□□□ -1.98
RUB1YDR139C TPS2P31688 896 aaKnown RBP2.67□□□□□ -1.98
RUB1YDR139C RAD23P32628 398 aaKnown RBP2.67□□□□□ -1.98
RUB1YDR139C TIP20P33891 701 aa2.67□□□□□ -1.98
RUB1YDR139C MYO3P36006 1272 aa2.67□□□□□ -1.98
RUB1YDR139C YFR018CP43599 363 aa2.67□□□□□ -1.98
RUB1YDR139C YGL114WP53134 725 aa2.67□□□□□ -1.98
RUB1YDR139C YOL029CQ08187 201 aa2.67□□□□□ -1.98
RUB1YDR139C TAF10Q12030 206 aa2.67□□□□□ -1.98
RUB1YDR139C SPO24Q3E752 67 aa2.67□□□□□ -1.98
RUB1YDR139C CCH1P50077 2039 aa2.66□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms