RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W RPS14BP39516 138 aaKnown RBP2.34□□□□□ -2.03
SHS1YDL225W YMR134WP40207 237 aa2.34□□□□□ -2.03
SHS1YDL225W AIM23P47015 356 aa2.34□□□□□ -2.03
SHS1YDL225W SHE4P51534 789 aa2.34□□□□□ -2.03
SHS1YDL225W YGL262WP53054 175 aa2.34□□□□□ -2.03
SHS1YDL225W YGR018CP53211 109 aa2.34□□□□□ -2.03
SHS1YDL225W VHT1P53241 593 aa2.34□□□□□ -2.03
SHS1YDL225W TPS1Q00764 495 aaKnown RBP2.34□□□□□ -2.03
SHS1YDL225W SLT2Q00772 484 aa2.34□□□□□ -2.03
SHS1YDL225W CSM3Q04659 317 aa2.34□□□□□ -2.03
SHS1YDL225W YOR376WQ08900 122 aa2.34□□□□□ -2.03
SHS1YDL225W HIF1Q12373 385 aa2.34□□□□□ -2.03
SHS1YDL225W RPL21BQ12672 160 aaKnown RBP2.34□□□□□ -2.03
SHS1YDL225W FAB1P34756 2278 aa2.34□□□□□ -2.04
SHS1YDL225W CBP6P07253 162 aaPredicted RBP2.34□□□□□ -2.04
SHS1YDL225W TOA1P32773 286 aa2.34□□□□□ -2.04
SHS1YDL225W PDC2P32896 925 aa2.34□□□□□ -2.04
SHS1YDL225W MID2P36027 376 aa2.34□□□□□ -2.04
SHS1YDL225W MRPL27P36526 146 aaPredicted RBP2.34□□□□□ -2.04
SHS1YDL225W BMT2P38278 337 aa2.34□□□□□ -2.04
SHS1YDL225W RCK2P38623 610 aa2.34□□□□□ -2.04
SHS1YDL225W SEO1P39709 593 aa2.34□□□□□ -2.04
SHS1YDL225W PEX22P39718 180 aa2.34□□□□□ -2.04
SHS1YDL225W YCH1P42937 148 aa2.34□□□□□ -2.04
SHS1YDL225W YGL114WP53134 725 aa2.34□□□□□ -2.04
SHS1YDL225W CDH1P53197 566 aa2.34□□□□□ -2.04
SHS1YDL225W YNL146WP53906 100 aa2.34□□□□□ -2.04
SHS1YDL225W RPL21AQ02753 160 aaKnown RBP2.34□□□□□ -2.04
SHS1YDL225W ECT1P33412 323 aa2.33□□□□□ -2.04
SHS1YDL225W LIN1P38852 340 aaPredicted RBP2.33□□□□□ -2.04
SHS1YDL225W YNL320WP42840 284 aa2.33□□□□□ -2.04
SHS1YDL225W NAS6P50086 228 aa2.33□□□□□ -2.04
SHS1YDL225W YGR015CP53208 328 aa2.33□□□□□ -2.04
SHS1YDL225W SUR7P54003 302 aa2.33□□□□□ -2.04
SHS1YDL225W SPO24Q3E752 67 aa2.33□□□□□ -2.04
SHS1YDL225W KRR1P25586 316 aaPredicted RBP2.32□□□□□ -2.04
SHS1YDL225W MYO3P36006 1272 aa2.32□□□□□ -2.04
SHS1YDL225W PEX32P38292 413 aa2.32□□□□□ -2.04
SHS1YDL225W STB1P42845 420 aa2.32□□□□□ -2.04
SHS1YDL225W MOB2P43563 287 aa2.32□□□□□ -2.04
SHS1YDL225W YJR054WP47114 497 aa2.32□□□□□ -2.04
SHS1YDL225W BIO3P50277 480 aa2.32□□□□□ -2.04
SHS1YDL225W RMI1Q02685 241 aa2.32□□□□□ -2.04
SHS1YDL225W VHS1Q03785 461 aa2.32□□□□□ -2.04
SHS1YDL225W SRO7Q12038 1033 aa2.32□□□□□ -2.04
SHS1YDL225W RGS2Q99188 309 aa2.32□□□□□ -2.04
SHS1YDL225W ASP3-2P0CX77 362 aa2.31□□□□□ -2.04
SHS1YDL225W ASP3-3P0CX78 362 aa2.31□□□□□ -2.04
SHS1YDL225W ASP3-4P0CX79 362 aa2.31□□□□□ -2.04
SHS1YDL225W ASP3-1P0CZ17 362 aa2.31□□□□□ -2.04
SHS1YDL225W MMS21P38632 267 aa2.31□□□□□ -2.04
SHS1YDL225W VEL1P53058 206 aa2.31□□□□□ -2.04
SHS1YDL225W LSG1P53145 640 aaKnown RBP2.31□□□□□ -2.04
SHS1YDL225W RNH201P53942 307 aa2.31□□□□□ -2.04
SHS1YDL225W SPH1Q06160 661 aa2.31□□□□□ -2.04
SHS1YDL225W MCH1Q07376 486 aa2.31□□□□□ -2.04
SHS1YDL225W YDR262WQ12331 272 aa2.31□□□□□ -2.04
SHS1YDL225W LDB17Q12342 491 aa2.31□□□□□ -2.04
SHS1YDL225W RPN6Q12377 434 aa2.31□□□□□ -2.04
SHS1YDL225W RNR2P09938 399 aaKnown RBP2.31□□□□□ -2.04
SHS1YDL225W ERG9P29704 444 aa2.31□□□□□ -2.04
SHS1YDL225W SRB2P34162 210 aa2.31□□□□□ -2.04
SHS1YDL225W SMP1P38128 452 aa2.31□□□□□ -2.04
SHS1YDL225W SHE1P38200 338 aa2.31□□□□□ -2.04
SHS1YDL225W DED81P38707 554 aaKnown RBP2.31□□□□□ -2.04
SHS1YDL225W POP2P39008 433 aa2.31□□□□□ -2.04
SHS1YDL225W BTT1P40314 149 aaPredicted RBP2.31□□□□□ -2.04
SHS1YDL225W TAF10Q12030 206 aa2.31□□□□□ -2.04
SHS1YDL225W STF1P01098 86 aa2.3□□□□□ -2.04
SHS1YDL225W GAL3P13045 520 aa2.3□□□□□ -2.04
SHS1YDL225W DCC1P25559 380 aa2.3□□□□□ -2.04
SHS1YDL225W URA10P30402 227 aa2.3□□□□□ -2.04
SHS1YDL225W VMA5P31412 392 aaKnown RBP2.3□□□□□ -2.04
SHS1YDL225W SHE3P38272 425 aaKnown RBP2.3□□□□□ -2.04
SHS1YDL225W MRX11Q03079 207 aa2.3□□□□□ -2.04
SHS1YDL225W SCS7Q03529 384 aa2.3□□□□□ -2.04
SHS1YDL225W DDC1Q08949 612 aa2.3□□□□□ -2.04
SHS1YDL225W YPQ1Q12010 308 aa2.3□□□□□ -2.04
SHS1YDL225W SAL1D6W196 494 aa2.29□□□□□ -2.04
SHS1YDL225W RPL18AP0CX49 186 aaKnown RBP2.29□□□□□ -2.04
SHS1YDL225W RPL18BP0CX50 186 aaKnown RBP2.29□□□□□ -2.04
SHS1YDL225W MRPS9P38120 278 aa2.29□□□□□ -2.04
SHS1YDL225W PCH2P38126 564 aa2.29□□□□□ -2.04
SHS1YDL225W SMF2P38778 549 aa2.29□□□□□ -2.04
SHS1YDL225W BUR2Q05949 395 aa2.29□□□□□ -2.04
SHS1YDL225W ALE1Q08548 619 aa2.29□□□□□ -2.04
SHS1YDL225W REX3Q12090 404 aa2.29□□□□□ -2.04
SHS1YDL225W TAF6P53040 516 aa2.28□□□□□ -2.04
SHS1YDL225W PXR1P53335 271 aaPredicted RBP2.28□□□□□ -2.04
SHS1YDL225W HCH1P53834 153 aa2.28□□□□□ -2.04
SHS1YDL225W PRO2P54885 456 aaKnown RBP2.28□□□□□ -2.04
SHS1YDL225W MGR3Q04472 501 aa2.28□□□□□ -2.04
SHS1YDL225W STE23Q06010 1027 aa2.28□□□□□ -2.04
SHS1YDL225W YDL012CQ12489 107 aa2.28□□□□□ -2.04
SHS1YDL225W TPI1P00942 248 aaKnown RBP2.28□□□□□ -2.05
SHS1YDL225W PUT4P15380 627 aa2.28□□□□□ -2.05
SHS1YDL225W EPT1P22140 391 aa2.28□□□□□ -2.05
SHS1YDL225W SPS19P32573 292 aaKnown RBP2.28□□□□□ -2.05
SHS1YDL225W SUR1P33300 382 aa2.28□□□□□ -2.05
SHS1YDL225W YKL071WP36086 256 aa2.28□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 80.9 ms