RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeast

Gene PTC1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTC1	YDL006W	PEX11	Q12462	236 aa		4.18	□□□□□ -1.74
PTC1	YDL006W	REV1	P12689	985 aa		4.17	□□□□□ -1.74
PTC1	YDL006W	RBK1	P25332	333 aa		4.17	□□□□□ -1.74
PTC1	YDL006W	DCC1	P25559	380 aa		4.17	□□□□□ -1.74
PTC1	YDL006W	RIM1	P32445	135 aa	Known RBP	4.17	□□□□□ -1.74
PTC1	YDL006W	MRP21	P38175	177 aa		4.17	□□□□□ -1.74
PTC1	YDL006W	LIN1	P38852	340 aa	Predicted RBP	4.17	□□□□□ -1.74
PTC1	YDL006W	YFL012W	P43580	148 aa		4.17	□□□□□ -1.74
PTC1	YDL006W	MSO1	P53604	210 aa	Known RBP	4.17	□□□□□ -1.74
PTC1	YDL006W	BIO4	P53630	237 aa		4.17	□□□□□ -1.74
PTC1	YDL006W	YIF1	P53845	314 aa	Known RBP	4.17	□□□□□ -1.74
PTC1	YDL006W	IBD2	P53892	351 aa		4.17	□□□□□ -1.74
PTC1	YDL006W	SLT2	Q00772	484 aa		4.17	□□□□□ -1.74
PTC1	YDL006W	PET117	Q02771	107 aa		4.17	□□□□□ -1.74
PTC1	YDL006W	CDC123	Q05791	360 aa		4.17	□□□□□ -1.74
PTC1	YDL006W	YPR114W	Q06107	315 aa		4.17	□□□□□ -1.74
PTC1	YDL006W	MUM3	Q08750	479 aa		4.17	□□□□□ -1.74
PTC1	YDL006W	YLR046C	Q12253	270 aa		4.17	□□□□□ -1.74
PTC1	YDL006W	YMR230W-A	Q3E7B5	62 aa		4.17	□□□□□ -1.74
PTC1	YDL006W	MTR10	Q99189	972 aa		4.17	□□□□□ -1.74
PTC1	YDL006W	PHO2	P07269	559 aa		4.16	□□□□□ -1.74
PTC1	YDL006W	NSP1	P14907	823 aa	Known RBP	4.16	□□□□□ -1.74
PTC1	YDL006W	SPO7	P18410	259 aa		4.16	□□□□□ -1.74
PTC1	YDL006W	AAT2	P23542	418 aa	Known RBP	4.16	□□□□□ -1.74
PTC1	YDL006W	MNE1	P24720	663 aa		4.16	□□□□□ -1.74
PTC1	YDL006W	CYM1	P32898	989 aa		4.16	□□□□□ -1.74
PTC1	YDL006W	IMP3	P32899	183 aa	Predicted RBP	4.16	□□□□□ -1.74
PTC1	YDL006W	ERG10	P41338	398 aa	Known RBP	4.16	□□□□□ -1.74
PTC1	YDL006W	BUD13	P46947	266 aa	Predicted RBP	4.16	□□□□□ -1.74
PTC1	YDL006W	AIM23	P47015	356 aa		4.16	□□□□□ -1.74
PTC1	YDL006W	LIA1	P47120	325 aa	Known RBP	4.16	□□□□□ -1.74
PTC1	YDL006W	HPT1	Q04178	221 aa	Known RBP	4.16	□□□□□ -1.74
PTC1	YDL006W	REX4	Q08237	289 aa		4.16	□□□□□ -1.74
PTC1	YDL006W	CLP1	Q08685	445 aa	Predicted RBP	4.16	□□□□□ -1.74
PTC1	YDL006W	RGS2	Q99188	309 aa		4.16	□□□□□ -1.74
PTC1	YDL006W	SEC14	P24280	304 aa	Known RBP	4.15	□□□□□ -1.75
PTC1	YDL006W	CDC10	P25342	322 aa	Known RBP	4.15	□□□□□ -1.75
PTC1	YDL006W	CTR86	P25355	563 aa		4.15	□□□□□ -1.75
PTC1	YDL006W	TIP1	P27654	210 aa	Predicted RBP	4.15	□□□□□ -1.75
PTC1	YDL006W	AEP1	P32493	518 aa		4.15	□□□□□ -1.75
PTC1	YDL006W	CSE1	P33307	960 aa		4.15	□□□□□ -1.75
PTC1	YDL006W	SOR1	P35497	357 aa	Known RBP	4.15	□□□□□ -1.75
PTC1	YDL006W	RRN10	P38204	145 aa		4.15	□□□□□ -1.75
PTC1	YDL006W	GDT1	P38301	280 aa	Predicted RBP	4.15	□□□□□ -1.75
PTC1	YDL006W	YHI9	P38765	294 aa		4.15	□□□□□ -1.75
PTC1	YDL006W	YHR131C	P38835	850 aa		4.15	□□□□□ -1.75
PTC1	YDL006W	LYS1	P38998	373 aa	RIP-Chip data	4.15	□□□□□ -1.75	not detected
PTC1	YDL006W	MST28	P39552	234 aa		4.15	□□□□□ -1.75
PTC1	YDL006W	SEO1	P39709	593 aa		4.15	□□□□□ -1.75
PTC1	YDL006W	YAL037W	P39728	267 aa		4.15	□□□□□ -1.75
PTC1	YDL006W	PEP8	P40335	379 aa		4.15	□□□□□ -1.75
PTC1	YDL006W	PAN6	P40459	309 aa		4.15	□□□□□ -1.75
PTC1	YDL006W	VHS2	P40463	436 aa		4.15	□□□□□ -1.75
PTC1	YDL006W	SEC28	P40509	296 aa	Known RBP	4.15	□□□□□ -1.75
PTC1	YDL006W	FLC3	P53121	802 aa		4.15	□□□□□ -1.75
PTC1	YDL006W	YNR048W	P53740	393 aa		4.15	□□□□□ -1.75
PTC1	YDL006W	MRS2	Q01926	470 aa		4.15	□□□□□ -1.75
PTC1	YDL006W	PIR1	Q03178	341 aa		4.15	□□□□□ -1.75
PTC1	YDL006W	YLR177W	Q06251	628 aa		4.15	□□□□□ -1.75
PTC1	YDL006W	SOR2	Q07786	357 aa		4.15	□□□□□ -1.75
PTC1	YDL006W	NSE1	Q07913	336 aa		4.15	□□□□□ -1.75
PTC1	YDL006W	SLD7	Q08457	257 aa		4.15	□□□□□ -1.75
PTC1	YDL006W	SKI7	Q08491	747 aa	Predicted RBP	4.15	□□□□□ -1.75
PTC1	YDL006W	YPL199C	Q08954	240 aa		4.15	□□□□□ -1.75
PTC1	YDL006W	AEP3	Q12089	606 aa		4.15	□□□□□ -1.75
PTC1	YDL006W	RUP1	Q12242	671 aa		4.15	□□□□□ -1.75
PTC1	YDL006W	YDR034W-B	Q6Q5X2	51 aa		4.15	□□□□□ -1.75
PTC1	YDL006W	RPS14A	P06367	137 aa	Known RBP	4.14	□□□□□ -1.75
PTC1	YDL006W	MSF1	P08425	469 aa		4.14	□□□□□ -1.75
PTC1	YDL006W	PMR1	P13586	950 aa		4.14	□□□□□ -1.75
PTC1	YDL006W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
PTC1	YDL006W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
PTC1	YDL006W	LSB5	P25369	354 aa		4.14	□□□□□ -1.75
PTC1	YDL006W	RPC19	P28000	142 aa	Known RBP	4.14	□□□□□ -1.75
PTC1	YDL006W	AGA1	P32323	725 aa		4.14	□□□□□ -1.75
PTC1	YDL006W	PHA2	P32452	334 aa		4.14	□□□□□ -1.75
PTC1	YDL006W	SWH1	P35845	1188 aa		4.14	□□□□□ -1.75
PTC1	YDL006W	PHO89	P38361	574 aa		4.14	□□□□□ -1.75
PTC1	YDL006W	YHR182W	P38870	785 aa		4.14	□□□□□ -1.75
PTC1	YDL006W	STN1	P38960	494 aa		4.14	□□□□□ -1.75
PTC1	YDL006W	RPS14B	P39516	138 aa	Known RBP	4.14	□□□□□ -1.75
PTC1	YDL006W	OSW5	P40219	148 aa		4.14	□□□□□ -1.75
PTC1	YDL006W	TAF6	P53040	516 aa		4.14	□□□□□ -1.75
PTC1	YDL006W	VEL1	P53058	206 aa		4.14	□□□□□ -1.75
PTC1	YDL006W	RCF2	P53721	224 aa		4.14	□□□□□ -1.75
PTC1	YDL006W	PRM1	P53835	661 aa		4.14	□□□□□ -1.75
PTC1	YDL006W	YNL143C	P53908	130 aa		4.14	□□□□□ -1.75
PTC1	YDL006W	YMR209C	Q03648	457 aa		4.14	□□□□□ -1.75
PTC1	YDL006W	HNT3	Q08702	217 aa		4.14	□□□□□ -1.75
PTC1	YDL006W	TIM18	Q08749	192 aa		4.14	□□□□□ -1.75
PTC1	YDL006W	PRP16	P15938	1071 aa	Predicted RBP	4.13	□□□□□ -1.75
PTC1	YDL006W	RPB4	P20433	221 aa	Predicted RBP	4.13	□□□□□ -1.75
PTC1	YDL006W	SPS22	P25380	463 aa		4.13	□□□□□ -1.75
PTC1	YDL006W	DEP1	P31385	405 aa		4.13	□□□□□ -1.75
PTC1	YDL006W	YKL097C	P34245	136 aa		4.13	□□□□□ -1.75
PTC1	YDL006W	YBR032W	P38223	100 aa		4.13	□□□□□ -1.75
PTC1	YDL006W	YBR062C	P38239	180 aa		4.13	□□□□□ -1.75
PTC1	YDL006W	YSW1	P38280	609 aa		4.13	□□□□□ -1.75
PTC1	YDL006W	HMS2	P47175	358 aa		4.13	□□□□□ -1.75
PTC1	YDL006W	EMC4	P53073	190 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 68.3 ms