RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W ANR2P36090 516 aaPredicted RBP7.37□□□□□ -1.23
ABP1YCR088W MRPL3P36516 390 aa7.37□□□□□ -1.23
ABP1YCR088W PEX28P38848 579 aa7.37□□□□□ -1.23
ABP1YCR088W YEL068CP39977 110 aa7.37□□□□□ -1.23
ABP1YCR088W HAM1P47119 197 aaKnown RBP7.37□□□□□ -1.23
ABP1YCR088W AAD10P47182 288 aa7.37□□□□□ -1.23
ABP1YCR088W IMP4P53941 290 aaKnown RBP7.37□□□□□ -1.23
ABP1YCR088W EAR1Q03212 550 aa7.37□□□□□ -1.23
ABP1YCR088W IPK1Q06667 281 aa7.37□□□□□ -1.23
ABP1YCR088W ASR1Q06834 288 aa7.37□□□□□ -1.23
ABP1YCR088W VPS68Q12016 184 aa7.37□□□□□ -1.23
ABP1YCR088W YOR114WQ12219 294 aa7.37□□□□□ -1.23
ABP1YCR088W YOR214CQ12282 236 aa7.37□□□□□ -1.23
ABP1YCR088W MMP1Q12372 583 aa7.37□□□□□ -1.23
ABP1YCR088W YGR161W-CQ3E744 92 aa7.37□□□□□ -1.23
ABP1YCR088W Q0182Q9ZZW1 134 aa7.37□□□□□ -1.23
ABP1YCR088W PHO80P20052 293 aa7.36□□□□□ -1.23
ABP1YCR088W PRP28P23394 588 aa7.36□□□□□ -1.23
ABP1YCR088W EXG1P23776 448 aaKnown RBP7.36□□□□□ -1.23
ABP1YCR088W YCP4P25349 247 aaKnown RBP7.36□□□□□ -1.23
ABP1YCR088W AHC2P25649 128 aa7.36□□□□□ -1.23
ABP1YCR088W PUB1P32588 453 aaKnown RBP RIP-Chip data7.36□□□□□ -1.23not detected
ABP1YCR088W MTC2P34246 357 aa7.36□□□□□ -1.23
ABP1YCR088W NAT2P37293 288 aa7.36□□□□□ -1.23
ABP1YCR088W THI2P38141 450 aa7.36□□□□□ -1.23
ABP1YCR088W PAU24P38155 120 aa7.36□□□□□ -1.23
ABP1YCR088W DED81P38707 554 aaKnown RBP7.36□□□□□ -1.23
ABP1YCR088W MED6P38782 295 aa7.36□□□□□ -1.23
ABP1YCR088W YHR097CP38809 366 aaKnown RBP7.36□□□□□ -1.23
ABP1YCR088W YHR122WP38829 231 aa7.36□□□□□ -1.23
ABP1YCR088W ALP1P38971 573 aa7.36□□□□□ -1.23
ABP1YCR088W PLB1P39105 664 aa7.36□□□□□ -1.23
ABP1YCR088W ECL1P48235 211 aa7.36□□□□□ -1.23
ABP1YCR088W AQR1P53943 586 aa7.36□□□□□ -1.23
ABP1YCR088W YKR011CQ02209 353 aa7.36□□□□□ -1.23
ABP1YCR088W YDR541CQ03049 344 aa7.36□□□□□ -1.23
ABP1YCR088W SSK1Q07084 712 aa7.36□□□□□ -1.23
ABP1YCR088W TPO4Q12256 659 aa7.36□□□□□ -1.23
ABP1YCR088W RPS21BQ3E754 87 aaKnown RBP7.36□□□□□ -1.23
ABP1YCR088W CKS1P20486 150 aaKnown RBP7.36□□□□□ -1.23
ABP1YCR088W APN1P22936 367 aa7.36□□□□□ -1.23
ABP1YCR088W ADE1P27616 306 aa7.36□□□□□ -1.23
ABP1YCR088W YMC1P32331 307 aa7.36□□□□□ -1.23
ABP1YCR088W ERG1P32476 496 aaKnown RBP7.36□□□□□ -1.23
ABP1YCR088W RPC34P32910 317 aa7.36□□□□□ -1.23
ABP1YCR088W SKN1P33336 771 aa7.36□□□□□ -1.23
ABP1YCR088W SHE2P36068 246 aaKnown RBP RIP-Chip data7.36□□□□□ -1.23not detected
ABP1YCR088W ECM34P38728 170 aa7.36□□□□□ -1.23
ABP1YCR088W MNT3P40549 630 aa7.36□□□□□ -1.23
ABP1YCR088W IBA57P47158 497 aa7.36□□□□□ -1.23
ABP1YCR088W NAT4Q04751 285 aa7.36□□□□□ -1.23
ABP1YCR088W YDL109CQ12103 647 aa7.36□□□□□ -1.23
ABP1YCR088W PDH1Q12428 516 aaKnown RBP7.36□□□□□ -1.23
ABP1YCR088W APC2Q12440 853 aa7.36□□□□□ -1.23
ABP1YCR088W LSO1Q3E827 93 aa7.36□□□□□ -1.23
ABP1YCR088W ERD2P18414 219 aa7.35□□□□□ -1.23
ABP1YCR088W DBP2P24783 546 aaKnown RBP7.35□□□□□ -1.23
ABP1YCR088W RNA14P25298 677 aaKnown RBP7.35□□□□□ -1.23
ABP1YCR088W ORC2P32833 620 aa7.35□□□□□ -1.23
ABP1YCR088W TCD2P36101 447 aaKnown RBP7.35□□□□□ -1.23
ABP1YCR088W DTR1P38125 572 aa7.35□□□□□ -1.23
ABP1YCR088W RRF1P38771 230 aa7.35□□□□□ -1.23
ABP1YCR088W GEP4P38812 185 aa7.35□□□□□ -1.23
ABP1YCR088W PKP1P40530 394 aa7.35□□□□□ -1.23
ABP1YCR088W ECM27P47144 725 aa7.35□□□□□ -1.23
ABP1YCR088W PMT5P52867 743 aa7.35□□□□□ -1.23
ABP1YCR088W DOC1P53068 250 aa7.35□□□□□ -1.23
ABP1YCR088W JAC1P53193 184 aa7.35□□□□□ -1.23
ABP1YCR088W PAU12P53343 120 aa7.35□□□□□ -1.23
ABP1YCR088W CWC25P53854 179 aaKnown RBP7.35□□□□□ -1.23
ABP1YCR088W TGL2P54857 326 aa7.35□□□□□ -1.23
ABP1YCR088W COX20Q04935 205 aa7.35□□□□□ -1.23
ABP1YCR088W YPR109WQ06104 294 aa7.35□□□□□ -1.23
ABP1YCR088W FRE3Q08905 711 aa7.35□□□□□ -1.23
ABP1YCR088W SLY41P22215 453 aa7.34□□□□□ -1.23
ABP1YCR088W MSS1P32559 526 aaPredicted RBP7.34□□□□□ -1.23
ABP1YCR088W CCZ1P38273 704 aa7.34□□□□□ -1.23
ABP1YCR088W RPE1P46969 238 aa7.34□□□□□ -1.23
ABP1YCR088W LEE1Q02799 301 aaKnown RBP7.34□□□□□ -1.23
ABP1YCR088W DML1Q03652 475 aa7.34□□□□□ -1.23
ABP1YCR088W UTP21Q06078 939 aaPredicted RBP7.34□□□□□ -1.23
ABP1YCR088W NMA1Q06178 401 aaKnown RBP7.34□□□□□ -1.23
ABP1YCR088W YOR289WQ12012 251 aaPredicted RBP7.34□□□□□ -1.23
ABP1YCR088W GCN4P03069 281 aa7.33□□□□□ -1.24
ABP1YCR088W AAC1P04710 309 aa7.33□□□□□ -1.24
ABP1YCR088W CBS1P14066 229 aa7.33□□□□□ -1.24
ABP1YCR088W YCL002CP25565 263 aa7.33□□□□□ -1.24
ABP1YCR088W RTG1P32607 177 aa7.33□□□□□ -1.24
ABP1YCR088W YEF1P32622 495 aa7.33□□□□□ -1.24
ABP1YCR088W TEF4P36008 412 aaKnown RBP7.33□□□□□ -1.24
ABP1YCR088W SDS22P36047 338 aa7.33□□□□□ -1.24
ABP1YCR088W TCM62P38228 572 aaKnown RBP7.33□□□□□ -1.24
ABP1YCR088W GRE3P38715 327 aaKnown RBP RIP-Chip data7.33□□□□□ -1.24not detected
ABP1YCR088W NEO1P40527 1151 aa7.33□□□□□ -1.24
ABP1YCR088W HXT9P40885 567 aa7.33□□□□□ -1.24
ABP1YCR088W DPB11P47027 764 aaPredicted RBP7.33□□□□□ -1.24
ABP1YCR088W FAA4P47912 694 aaKnown RBP7.33□□□□□ -1.24
ABP1YCR088W COS10P52924 374 aa7.33□□□□□ -1.24
ABP1YCR088W VOA1P53262 265 aa7.33□□□□□ -1.24
ABP1YCR088W RRN11Q04712 507 aa7.33□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 53.6 ms