RNA–Protein interactions for RNA: YBR289W

SNF5, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF5, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF5YBR289W CIN8P27895 1000 aa1.6□□□□□ -2.15
SNF5YBR289W RPB9P27999 122 aa1.6□□□□□ -2.15
SNF5YBR289W RPT5P33297 434 aaKnown RBP1.6□□□□□ -2.15
SNF5YBR289W UTH1P36135 365 aa1.6□□□□□ -2.15
SNF5YBR289W RRG9P40156 214 aa1.6□□□□□ -2.15
SNF5YBR289W BIR1P47134 954 aa1.6□□□□□ -2.15
SNF5YBR289W ERV25P54837 211 aaKnown RBP1.6□□□□□ -2.15
SNF5YBR289W CDC14Q00684 551 aa1.6□□□□□ -2.15
SNF5YBR289W MGR3Q04472 501 aa1.6□□□□□ -2.15
SNF5YBR289W UNG1P12887 359 aa1.59□□□□□ -2.15
SNF5YBR289W HSP26P15992 214 aaKnown RBP RIP-Chip data1.59□□□□□ -2.15not detected
SNF5YBR289W YBR062CP38239 180 aa1.59□□□□□ -2.15
SNF5YBR289W PFS1P38872 237 aa1.59□□□□□ -2.15
SNF5YBR289W CDH1P53197 566 aa1.59□□□□□ -2.15
SNF5YBR289W MTQ1P53944 314 aa1.59□□□□□ -2.15
SNF5YBR289W ACT1P60010 375 aaKnown RBP1.59□□□□□ -2.15
SNF5YBR289W YLR177WQ06251 628 aa1.59□□□□□ -2.15
SNF5YBR289W SHS1Q07657 551 aa1.59□□□□□ -2.15
SNF5YBR289W HTZ1Q12692 134 aaKnown RBP1.59□□□□□ -2.15
SNF5YBR289W GIT1P25346 518 aa1.59□□□□□ -2.16
SNF5YBR289W ERG9P29704 444 aa1.59□□□□□ -2.16
SNF5YBR289W SSE1P32589 693 aaKnown RBP1.59□□□□□ -2.16
SNF5YBR289W PRP39P39682 629 aaKnown RBP1.59□□□□□ -2.16
SNF5YBR289W BTT1P40314 149 aaPredicted RBP1.59□□□□□ -2.16
SNF5YBR289W VHT1P53241 593 aa1.59□□□□□ -2.16
SNF5YBR289W ECM19Q06011 112 aa1.59□□□□□ -2.16
SNF5YBR289W TIR4Q12218 487 aaPredicted RBP1.59□□□□□ -2.16
SNF5YBR289W EAF3Q12432 401 aa1.59□□□□□ -2.16
SNF5YBR289W TPI1P00942 248 aaKnown RBP1.58□□□□□ -2.16
SNF5YBR289W COX4P04037 155 aa1.58□□□□□ -2.16
SNF5YBR289W RPL18AP0CX49 186 aaKnown RBP1.58□□□□□ -2.16
SNF5YBR289W RPL18BP0CX50 186 aaKnown RBP1.58□□□□□ -2.16
SNF5YBR289W TRX1P22217 103 aaKnown RBP1.58□□□□□ -2.16
SNF5YBR289W AAT2P23542 418 aaKnown RBP1.58□□□□□ -2.16
SNF5YBR289W DCC1P25559 380 aa1.58□□□□□ -2.16
SNF5YBR289W YPS1P32329 569 aa1.58□□□□□ -2.16
SNF5YBR289W HMX1P32339 317 aa1.58□□□□□ -2.16
SNF5YBR289W EFB1P32471 206 aaKnown RBP1.58□□□□□ -2.16
SNF5YBR289W MYO3P36006 1272 aa1.58□□□□□ -2.16
SNF5YBR289W YKR015CP36111 568 aa1.58□□□□□ -2.16
SNF5YBR289W GDT1P38301 280 aaPredicted RBP1.58□□□□□ -2.16
SNF5YBR289W SWC5P38326 303 aa1.58□□□□□ -2.16
SNF5YBR289W YPT35P38815 214 aaKnown RBP1.58□□□□□ -2.16
SNF5YBR289W SEO1P39709 593 aa1.58□□□□□ -2.16
SNF5YBR289W VAC14Q06708 880 aa1.58□□□□□ -2.16
SNF5YBR289W HIF1Q12373 385 aa1.58□□□□□ -2.16
SNF5YBR289W RAX2Q12465 1220 aa1.58□□□□□ -2.16
SNF5YBR289W ARF2P19146 181 aaKnown RBP1.58□□□□□ -2.16
SNF5YBR289W MRPL8P22353 238 aa1.58□□□□□ -2.16
SNF5YBR289W CYM1P32898 989 aa1.58□□□□□ -2.16
SNF5YBR289W SSO2P39926 295 aa1.58□□□□□ -2.16
SNF5YBR289W INA22P40576 216 aa1.58□□□□□ -2.16
SNF5YBR289W YGL185CP53100 379 aa1.58□□□□□ -2.16
SNF5YBR289W RRP46P53256 223 aaPredicted RBP1.58□□□□□ -2.16
SNF5YBR289W BIO4P53630 237 aa1.58□□□□□ -2.16
SNF5YBR289W REX2P54964 269 aaKnown RBP1.58□□□□□ -2.16
SNF5YBR289W MEX67Q99257 599 aaKnown RBP1.58□□□□□ -2.16
SNF5YBR289W SPT7P35177 1332 aa1.58□□□□□ -2.16
SNF5YBR289W CBP2P03874 630 aaPredicted RBP1.57□□□□□ -2.16
SNF5YBR289W ZRC1P20107 442 aa1.57□□□□□ -2.16
SNF5YBR289W CMK2P22517 447 aa1.57□□□□□ -2.16
SNF5YBR289W YCR025CP25352 136 aa1.57□□□□□ -2.16
SNF5YBR289W PRS1P32895 427 aaKnown RBP1.57□□□□□ -2.16
SNF5YBR289W PPQ1P32945 549 aa1.57□□□□□ -2.16
SNF5YBR289W DBP7P36120 742 aaKnown RBP1.57□□□□□ -2.16
SNF5YBR289W VPS45P38932 577 aa1.57□□□□□ -2.16
SNF5YBR289W FHL1P39521 936 aa1.57□□□□□ -2.16
SNF5YBR289W MAM33P40513 266 aa1.57□□□□□ -2.16
SNF5YBR289W AIM23P47015 356 aa1.57□□□□□ -2.16
SNF5YBR289W YPS5P53057 165 aa1.57□□□□□ -2.16
SNF5YBR289W SHE10P53075 577 aa1.57□□□□□ -2.16
SNF5YBR289W ADD37Q03233 198 aa1.57□□□□□ -2.16
SNF5YBR289W ENT5Q03769 411 aaKnown RBP1.57□□□□□ -2.16
SNF5YBR289W CAB5Q03941 241 aa1.57□□□□□ -2.16
SNF5YBR289W ARR1Q06596 294 aa1.57□□□□□ -2.16
SNF5YBR289W YLR012CQ07927 99 aa1.57□□□□□ -2.16
SNF5YBR289W YDL109CQ12103 647 aa1.57□□□□□ -2.16
SNF5YBR289W RTC5Q12108 567 aaKnown RBP1.57□□□□□ -2.16
SNF5YBR289W RPL16AP26784 199 aaKnown RBP1.57□□□□□ -2.16
SNF5YBR289W MRP21P38175 177 aa1.57□□□□□ -2.16
SNF5YBR289W YBL028CP38202 106 aa1.57□□□□□ -2.16
SNF5YBR289W LSM12P38828 187 aaKnown RBP1.57□□□□□ -2.16
SNF5YBR289W POP2P39008 433 aa1.57□□□□□ -2.16
SNF5YBR289W FMP33P46998 180 aa1.57□□□□□ -2.16
SNF5YBR289W OKP1P53298 406 aa1.57□□□□□ -2.16
SNF5YBR289W TPS1Q00764 495 aaKnown RBP1.57□□□□□ -2.16
SNF5YBR289W HAL1Q01766 294 aa1.57□□□□□ -2.16
SNF5YBR289W MRPS16Q02608 121 aa1.57□□□□□ -2.16
SNF5YBR289W RRB1Q04225 511 aaKnown RBP1.57□□□□□ -2.16
SNF5YBR289W YMR027WQ04371 470 aa1.57□□□□□ -2.16
SNF5YBR289W CAR2P07991 424 aaKnown RBP1.56□□□□□ -2.16
SNF5YBR289W FRM2P37261 193 aa1.56□□□□□ -2.16
SNF5YBR289W SEC9P40357 651 aa1.56□□□□□ -2.16
SNF5YBR289W HAC1P41546 238 aa1.56□□□□□ -2.16
SNF5YBR289W YNL040WP53960 456 aaPredicted RBP1.56□□□□□ -2.16
SNF5YBR289W UBX2Q04228 584 aa1.56□□□□□ -2.16
SNF5YBR289W YMR310CQ04867 317 aaPredicted RBP1.56□□□□□ -2.16
SNF5YBR289W PCL9Q12477 304 aa1.56□□□□□ -2.16
SNF5YBR289W CBP6P07253 162 aaPredicted RBP1.56□□□□□ -2.16
SNF5YBR289W RAD5P32849 1169 aaPredicted RBP1.56□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms