RNA–Protein interactions for RNA: YBR260C

RGD1, Transcript of GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, yeast

Gene RGD1, Length 2,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RGD1	YBR260C	FKH2	P41813	862 aa		5.75	□□□□□ -1.49
RGD1	YBR260C	ABM1	P47146	123 aa		5.75	□□□□□ -1.49
RGD1	YBR260C	GTO1	P48239	356 aa		5.75	□□□□□ -1.49
RGD1	YBR260C	SDT1	P53078	280 aa		5.75	□□□□□ -1.49
RGD1	YBR260C	YGL185C	P53100	379 aa		5.75	□□□□□ -1.49
RGD1	YBR260C	BOP2	Q06150	570 aa		5.75	□□□□□ -1.49
RGD1	YBR260C	ISA1	Q07821	250 aa	Predicted RBP	5.75	□□□□□ -1.49
RGD1	YBR260C	GRC3	Q07845	632 aa		5.75	□□□□□ -1.49
RGD1	YBR260C	TMS1	Q12116	473 aa		5.75	□□□□□ -1.49
RGD1	YBR260C	UPC2	Q12151	913 aa		5.75	□□□□□ -1.49
RGD1	YBR260C	YJR112W-A	Q3E743	109 aa		5.75	□□□□□ -1.49
RGD1	YBR260C	HTA2	P04912	132 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	YOL163W	P0CF20	169 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	SEC22	P22214	214 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	YIH1	P25637	258 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	SUA5	P32579	426 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	HTD2	P38790	280 aa	Known RBP	5.74	□□□□□ -1.49
RGD1	YBR260C	ALP1	P38971	573 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	SIP4	P46954	829 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	NUP42	P49686	430 aa	Known RBP	5.74	□□□□□ -1.49
RGD1	YBR260C	RTT102	P53330	157 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	AAT1	Q01802	451 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	ERO1	Q03103	563 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	SPR28	Q04921	423 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	YLR455W	Q06188	304 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	HXK2	P04807	486 aa	Known RBP	5.74	□□□□□ -1.49
RGD1	YBR260C	HEM2	P05373	342 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	ERD2	P18414	219 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	RRP7	P25368	297 aa	Predicted RBP	5.74	□□□□□ -1.49
RGD1	YBR260C	GUT1	P32190	709 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	OAC1	P32332	324 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	COT1	P32798	439 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	GPT2	P36148	743 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	BET3	P36149	193 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	SDH4	P37298	181 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	YMC2	P38087	329 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	SLI15	P38283	698 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	RAD55	P38953	406 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	SWM2	P40342	146 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	BMT5	P40493	336 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	IRC7	P43623	340 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	SPO74	P45819	413 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	AIM25	P47140	327 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	YGR012W	P53206	393 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	FMP41	P53889	259 aa	Known RBP	5.74	□□□□□ -1.49
RGD1	YBR260C	STD1	Q02794	444 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	GOT1	Q03554	138 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	DCR2	Q05924	578 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	YPR109W	Q06104	294 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	HDA2	Q06629	674 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	YDR056C	Q12025	205 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	ATG41	Q12048	136 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	MRX4	Q12467	430 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	PSF1	Q12488	208 aa		5.74	□□□□□ -1.49
RGD1	YBR260C	PMA1	P05030	918 aa	Known RBP	5.73	□□□□□ -1.49
RGD1	YBR260C	SWI5	P08153	709 aa		5.73	□□□□□ -1.49
RGD1	YBR260C	URA6	P15700	204 aa		5.73	□□□□□ -1.49
RGD1	YBR260C	ATG15	P25641	520 aa		5.73	□□□□□ -1.49
RGD1	YBR260C	SHG1	P38337	142 aa		5.73	□□□□□ -1.49
RGD1	YBR260C	YHR035W	P38769	630 aa		5.73	□□□□□ -1.49
RGD1	YBR260C	LRP1	P38801	184 aa	Known RBP	5.73	□□□□□ -1.49
RGD1	YBR260C	SFB3	P38810	929 aa		5.73	□□□□□ -1.49
RGD1	YBR260C	AXL2	P38928	823 aa		5.73	□□□□□ -1.49
RGD1	YBR260C	GCV3	P39726	170 aa	Predicted RBP	5.73	□□□□□ -1.49
RGD1	YBR260C	GTT3	P39996	337 aa		5.73	□□□□□ -1.49
RGD1	YBR260C	AYR1	P40471	297 aa		5.73	□□□□□ -1.49
RGD1	YBR260C	POG1	P40473	351 aa		5.73	□□□□□ -1.49
RGD1	YBR260C	SSU1	P41930	458 aa		5.73	□□□□□ -1.49
RGD1	YBR260C	MEP2	P41948	499 aa		5.73	□□□□□ -1.49
RGD1	YBR260C	QRI7	P43122	407 aa		5.73	□□□□□ -1.49
RGD1	YBR260C	COS10	P52924	374 aa		5.73	□□□□□ -1.49
RGD1	YBR260C	MTL1	P53214	551 aa		5.73	□□□□□ -1.49
RGD1	YBR260C	VOA1	P53262	265 aa		5.73	□□□□□ -1.49
RGD1	YBR260C	YKR011C	Q02209	353 aa		5.73	□□□□□ -1.49
RGD1	YBR260C	SEC13	Q04491	297 aa	Known RBP	5.73	□□□□□ -1.49
RGD1	YBR260C	MRH1	Q12117	320 aa	Predicted RBP	5.73	□□□□□ -1.49
RGD1	YBR260C	LPX1	Q12405	387 aa	Known RBP	5.73	□□□□□ -1.49
RGD1	YBR260C	RPL9A	P05738	191 aa	Known RBP	5.72	□□□□□ -1.49
RGD1	YBR260C	UNG1	P12887	359 aa		5.72	□□□□□ -1.49
RGD1	YBR260C	ZRC1	P20107	442 aa		5.72	□□□□□ -1.49
RGD1	YBR260C	SEC62	P21825	274 aa		5.72	□□□□□ -1.49
RGD1	YBR260C	VPH1	P32563	840 aa	Known RBP	5.72	□□□□□ -1.49
RGD1	YBR260C	SNC2	P33328	115 aa		5.72	□□□□□ -1.49
RGD1	YBR260C	TSA1	P34760	196 aa	Known RBP	5.72	□□□□□ -1.49
RGD1	YBR260C	GMH1	P36125	273 aa		5.72	□□□□□ -1.49
RGD1	YBR260C	APE3	P37302	537 aa	Known RBP	5.72	□□□□□ -1.49
RGD1	YBR260C	YBR063C	P38083	404 aa		5.72	□□□□□ -1.49
RGD1	YBR260C	TSL1	P38427	1098 aa	Known RBP	5.72	□□□□□ -1.49
RGD1	YBR260C	ARP1	P38696	384 aa		5.72	□□□□□ -1.49
RGD1	YBR260C	VAB2	P40003	282 aa		5.72	□□□□□ -1.49
RGD1	YBR260C	BUR6	P40096	142 aa		5.72	□□□□□ -1.49
RGD1	YBR260C	YIL108W	P40483	696 aa	Known RBP	5.72	□□□□□ -1.49
RGD1	YBR260C	GAB1	P41733	394 aa		5.72	□□□□□ -1.49
RGD1	YBR260C	SLS1	P42900	643 aa		5.72	□□□□□ -1.49
RGD1	YBR260C	RMD8	P43620	662 aa		5.72	□□□□□ -1.49
RGD1	YBR260C	RPL9B	P51401	191 aa	Known RBP	5.72	□□□□□ -1.49
RGD1	YBR260C	YNR065C	P53751	1116 aa		5.72	□□□□□ -1.49
RGD1	YBR260C	CWC27	Q02770	301 aa		5.72	□□□□□ -1.49
RGD1	YBR260C	TRS31	Q03337	283 aa		5.72	□□□□□ -1.49
RGD1	YBR260C	SHS1	Q07657	551 aa		5.72	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms