RNA–Protein interactions for RNA: SCR1

SCR1, Transcript of RNA subunit of the Signal Recognition Particle (SRP), yeastyeast

Gene SCR1, Length 522 nt, Biotype ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCR1SCR1 HDA2Q06629 674 aa13.27□□□□□ -0.29
SCR1SCR1 CRT10Q08226 957 aa13.27□□□□□ -0.29
SCR1SCR1 RDL2Q08742 149 aaKnown RBP13.27□□□□□ -0.29
SCR1SCR1 DFG16Q99234 619 aa13.27□□□□□ -0.29
SCR1SCR1 YOL087CQ99247 1116 aa13.27□□□□□ -0.29
SCR1SCR1 RPL24AP04449 155 aaKnown RBP13.26□□□□□ -0.29
SCR1SCR1 KRE6P32486 720 aa13.26□□□□□ -0.29
SCR1SCR1 HBS1P32769 611 aaKnown RBP13.26□□□□□ -0.29
SCR1SCR1 GPX1P36014 167 aa13.26□□□□□ -0.29
SCR1SCR1 MGE1P38523 228 aa13.26□□□□□ -0.29
SCR1SCR1 PEX18P38855 283 aa13.26□□□□□ -0.29
SCR1SCR1 YEL068CP39977 110 aa13.26□□□□□ -0.29
SCR1SCR1 YNL195CP40168 261 aa13.26□□□□□ -0.29
SCR1SCR1 PRY1P47032 299 aa13.26□□□□□ -0.29
SCR1SCR1 OGG1P53397 376 aaPredicted RBP13.26□□□□□ -0.29
SCR1SCR1 IRC19Q07843 230 aa13.26□□□□□ -0.29
SCR1SCR1 CAR2P07991 424 aaKnown RBP13.25□□□□□ -0.29
SCR1SCR1 MCM1P11746 286 aa13.25□□□□□ -0.29
SCR1SCR1 BAT2P47176 376 aaKnown RBP13.25□□□□□ -0.29
SCR1SCR1 HMO1Q03973 246 aaKnown RBP13.25□□□□□ -0.29
SCR1SCR1 SEC13Q04491 297 aaKnown RBP13.25□□□□□ -0.29
SCR1SCR1 GRE1Q08969 168 aa13.25□□□□□ -0.29
SCR1SCR1 HER1Q12276 1246 aa13.25□□□□□ -0.29
SCR1SCR1 SCO1P23833 295 aa13.24□□□□□ -0.29
SCR1SCR1 GSH1P32477 678 aa13.24□□□□□ -0.29
SCR1SCR1 IDS2P46958 469 aa13.24□□□□□ -0.29
SCR1SCR1 SHE4P51534 789 aa13.24□□□□□ -0.29
SCR1SCR1 SOK2P53438 785 aaPredicted RBP13.24□□□□□ -0.29
SCR1SCR1 YPL191CQ08930 360 aa13.24□□□□□ -0.29
SCR1SCR1 RLM1Q12224 676 aa13.24□□□□□ -0.29
SCR1SCR1 RRP7P25368 297 aaPredicted RBP13.23□□□□□ -0.29
SCR1SCR1 HSP30P25619 332 aa13.23□□□□□ -0.29
SCR1SCR1 APE2P32454 952 aaKnown RBP13.23□□□□□ -0.29
SCR1SCR1 TIM12P32830 109 aa13.23□□□□□ -0.29
SCR1SCR1 MDL1P33310 695 aa13.23□□□□□ -0.29
SCR1SCR1 JEN1P36035 616 aa13.23□□□□□ -0.29
SCR1SCR1 YMR262WP38430 313 aa13.23□□□□□ -0.29
SCR1SCR1 SWD1P39706 426 aa13.23□□□□□ -0.29
SCR1SCR1 NIT2P47016 307 aa13.23□□□□□ -0.29
SCR1SCR1 TFB3Q03290 321 aa13.23□□□□□ -0.29
SCR1SCR1 YPR127WQ06494 345 aa13.23□□□□□ -0.29
SCR1SCR1 NTG2Q08214 380 aa13.23□□□□□ -0.29
SCR1SCR1 RCN2Q12044 265 aa13.23□□□□□ -0.29
SCR1SCR1 VIK1Q12045 647 aa13.23□□□□□ -0.29
SCR1SCR1 CTA1P15202 515 aa13.22□□□□□ -0.29
SCR1SCR1 NUP1P20676 1076 aa13.22□□□□□ -0.29
SCR1SCR1 ATG15P25641 520 aa13.22□□□□□ -0.29
SCR1SCR1 TRS65P32893 560 aa13.22□□□□□ -0.29
SCR1SCR1 CHK1P38147 527 aa13.22□□□□□ -0.29
SCR1SCR1 SKN7P38889 622 aa13.22□□□□□ -0.29
SCR1SCR1 CAK1P43568 368 aaPredicted RBP13.22□□□□□ -0.29
SCR1SCR1 RMR1P53060 241 aa13.22□□□□□ -0.29
SCR1SCR1 YGL235WP53071 178 aa13.22□□□□□ -0.29
SCR1SCR1 COQ10Q08058 207 aa13.22□□□□□ -0.29
SCR1SCR1 SKI7Q08491 747 aaPredicted RBP13.22□□□□□ -0.29
SCR1SCR1 PEP4P07267 405 aaKnown RBP13.21□□□□□ -0.29
SCR1SCR1 MDH2P22133 377 aa13.21□□□□□ -0.29
SCR1SCR1 ALP1P38971 573 aa13.21□□□□□ -0.29
SCR1SCR1 VHR1P40522 640 aa13.21□□□□□ -0.29
SCR1SCR1 AGP3P43548 558 aa13.21□□□□□ -0.29
SCR1SCR1 FAR7P43592 221 aa13.21□□□□□ -0.29
SCR1SCR1 MDE1P47095 244 aa13.21□□□□□ -0.29
SCR1SCR1 MON1P53129 644 aa13.21□□□□□ -0.29
SCR1SCR1 SWA2Q06677 668 aa13.21□□□□□ -0.29
SCR1SCR1 MET2P08465 486 aa13.2□□□□□ -0.3
SCR1SCR1 MAK32P23060 363 aa13.2□□□□□ -0.3
SCR1SCR1 YGR016WP53209 190 aa13.2□□□□□ -0.3
SCR1SCR1 BUD9P53226 547 aa13.2□□□□□ -0.3
SCR1SCR1 PLB2Q03674 706 aa13.2□□□□□ -0.3
SCR1SCR1 HFD1Q04458 532 aa13.2□□□□□ -0.3
SCR1SCR1 CRR1Q05790 422 aa13.2□□□□□ -0.3
SCR1SCR1 YAL064W-BO13512 126 aa13.19□□□□□ -0.3
SCR1SCR1 HAP4P14064 554 aa13.19□□□□□ -0.3
SCR1SCR1 CDC3P32457 520 aaKnown RBP13.19□□□□□ -0.3
SCR1SCR1 MSN4P33749 630 aa13.19□□□□□ -0.3
SCR1SCR1 MAE1P36013 669 aaKnown RBP13.19□□□□□ -0.3
SCR1SCR1 SIC1P38634 284 aa13.19□□□□□ -0.3
SCR1SCR1 RIX1P38883 763 aaPredicted RBP13.19□□□□□ -0.3
SCR1SCR1 MSY1P48527 492 aa13.19□□□□□ -0.3
SCR1SCR1 YGR126WP53274 230 aa13.19□□□□□ -0.3
SCR1SCR1 RBG2P53295 368 aaKnown RBP13.19□□□□□ -0.3
SCR1SCR1 YDR239CQ03780 787 aa13.19□□□□□ -0.3
SCR1SCR1 SNT309Q06091 175 aaPredicted RBP13.19□□□□□ -0.3
SCR1SCR1 NFI1Q12216 726 aa13.19□□□□□ -0.3
SCR1SCR1 YPK2P18961 677 aa13.18□□□□□ -0.3
SCR1SCR1 RHB1P25378 209 aa13.18□□□□□ -0.3
SCR1SCR1 ARC19P33204 171 aaKnown RBP13.18□□□□□ -0.3
SCR1SCR1 MRPL39P36533 70 aa13.18□□□□□ -0.3
SCR1SCR1 SRO77P38163 1010 aa13.18□□□□□ -0.3
SCR1SCR1 POP1P41812 875 aa13.18□□□□□ -0.3
SCR1SCR1 MPP6P53725 186 aaPredicted RBP13.18□□□□□ -0.3
SCR1SCR1 VBA4Q04602 768 aaKnown RBP13.18□□□□□ -0.3
SCR1SCR1 RSA3Q05942 220 aaKnown RBP13.18□□□□□ -0.3
SCR1SCR1 BTS1Q12051 335 aa13.18□□□□□ -0.3
SCR1SCR1 YPR015CQ12531 247 aa13.18□□□□□ -0.3
SCR1SCR1 PRP28P23394 588 aa13.17□□□□□ -0.3
SCR1SCR1 YCR100CP25606 316 aa13.17□□□□□ -0.3
SCR1SCR1 YKL071WP36086 256 aa13.17□□□□□ -0.3
SCR1SCR1 FET3P38993 636 aa13.17□□□□□ -0.3
SCR1SCR1 NAB3P38996 802 aaKnown RBP RIP-Chip data13.17□□□□□ -0.3not detected
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms