RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 CCND2P30279 289 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 IRS1P35568 1242 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 EIF4A3P38919 411 aaKnown RBP8.92□□□□□ -0.98
SCARB2-220ENST00000640076 MMP16P51512 607 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 PWP1Q13610 501 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 GRB14Q14449 540 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 BRD3Q15059 726 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 NIPA1Q7RTP0 329 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 PLEKHH3Q7Z736 793 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 PLA2G4DQ86XP0 818 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 SLC9A9Q8IVB4 645 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 MXRA8Q9BRK3 442 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 PRR14Q9BWN1 585 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 SCHIP1Q9P0W5 487 aaPredicted RBP8.92□□□□□ -0.98
SCARB2-220ENST00000640076 PLAAQ9Y263 795 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 UBIAD1Q9Y5Z9 338 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 ZNF236Q9UL36 1845 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 KIAA1217Q5T5P2 1943 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 SMAD7O15105 426 aaKnown RBP8.92□□□□□ -0.98
SCARB2-220ENST00000640076 MSH4O15457 936 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 PMLP29590 882 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 LONP1P36776 959 aaKnown RBP8.92□□□□□ -0.98
SCARB2-220ENST00000640076 TXKP42681 527 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 HLTFQ14527 1009 aaKnown RBP eCLIP8.92□□□□□ -0.98
SCARB2-220ENST00000640076 ZRSR2Q15696 482 aaKnown RBP8.92□□□□□ -0.98
SCARB2-220ENST00000640076 DDR2Q16832 855 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 KLHL40Q2TBA0 621 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 SKOR2Q2VWA4 1001 aaPredicted RBP8.92□□□□□ -0.98
SCARB2-220ENST00000640076 RESP18Q5W5W9 173 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 ZNF280DQ6N043 979 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 BPHLQ86WA6 291 aaPredicted RBP8.92□□□□□ -0.98
SCARB2-220ENST00000640076 SLFN12Q8IYM2 578 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 FSIP1Q8NA03 581 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 MRPS27Q92552 414 aaKnown RBP8.92□□□□□ -0.98
SCARB2-220ENST00000640076 GJA10Q969M2 543 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 FAM20AQ96MK3 541 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 INPP4AQ96PE3 977 aaPredicted RBP8.92□□□□□ -0.98
SCARB2-220ENST00000640076 GOLPH3LQ9H4A5 285 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 TTC12Q9H892 705 aaPredicted RBP8.92□□□□□ -0.98
SCARB2-220ENST00000640076 JADE2Q9NQC1 790 aa8.92□□□□□ -0.98
SCARB2-220ENST00000640076 FBXO9Q9UK97 447 aaPredicted RBP8.92□□□□□ -0.98
SCARB2-220ENST00000640076 LRRC37A2A6NM11 1700 aa8.91□□□□□ -0.98
SCARB2-220ENST00000640076 FAM237AA0A1B0GTK4 181 aa8.91□□□□□ -0.98
SCARB2-220ENST00000640076 A0A1B0GVL5 298 aa8.91□□□□□ -0.98
SCARB2-220ENST00000640076 SLC15A5A6NIM6 579 aa8.91□□□□□ -0.98
SCARB2-220ENST00000640076 COBLO75128 1261 aa8.91□□□□□ -0.98
SCARB2-220ENST00000640076 STAM2O75886 525 aa8.91□□□□□ -0.98
SCARB2-220ENST00000640076 ARP10275 920 aa8.91□□□□□ -0.98
SCARB2-220ENST00000640076 PSMA6P60900 246 aaKnown RBP8.91□□□□□ -0.98
SCARB2-220ENST00000640076 ZNF792Q3KQV3 632 aa8.91□□□□□ -0.98
SCARB2-220ENST00000640076 SPECC1Q5M775 1068 aa8.91□□□□□ -0.98
SCARB2-220ENST00000640076 USP49Q70CQ1 688 aa8.91□□□□□ -0.98
SCARB2-220ENST00000640076 DDX42Q86XP3 938 aaKnown RBP eCLIP8.91□□□□□ -0.98
SCARB2-220ENST00000640076 SYNPOQ8N3V7 929 aa8.91□□□□□ -0.98
SCARB2-220ENST00000640076 IGSF22Q8N9C0 903 aa8.91□□□□□ -0.98
SCARB2-220ENST00000640076 THAP3Q8WTV1 239 aaPredicted RBP8.91□□□□□ -0.98
SCARB2-220ENST00000640076 ZNF296Q8WUU4 475 aaPredicted RBP8.91□□□□□ -0.98
SCARB2-220ENST00000640076 UIMC1Q96RL1 719 aa8.91□□□□□ -0.98
SCARB2-220ENST00000640076 ARPC5LQ9BPX5 153 aa8.91□□□□□ -0.98
SCARB2-220ENST00000640076 NT5C1AQ9BXI3 368 aa8.91□□□□□ -0.98
SCARB2-220ENST00000640076 WDR11Q9BZH6 1224 aa8.91□□□□□ -0.98
SCARB2-220ENST00000640076 ZNF700Q9H0M5 742 aa8.91□□□□□ -0.98
SCARB2-220ENST00000640076 KCNH7Q9NS40 1196 aa8.91□□□□□ -0.98
SCARB2-220ENST00000640076 MGAMO43451 1857 aa8.91□□□□□ -0.98
SCARB2-220ENST00000640076 B4DLN1 442 aa8.9□□□□□ -0.98
SCARB2-220ENST00000640076 TBC1D8O95759 1140 aa8.9□□□□□ -0.98
SCARB2-220ENST00000640076 PFKFB1P16118 471 aa8.9□□□□□ -0.98
SCARB2-220ENST00000640076 HSPA6P17066 643 aa8.9□□□□□ -0.98
SCARB2-220ENST00000640076 TECP42680 631 aa8.9□□□□□ -0.98
SCARB2-220ENST00000640076 NDUFA8P51970 172 aa8.9□□□□□ -0.98
SCARB2-220ENST00000640076 FAM160A1Q05DH4 1040 aa8.9□□□□□ -0.98
SCARB2-220ENST00000640076 MTMR1Q13613 665 aa8.9□□□□□ -0.98
SCARB2-220ENST00000640076 PDIA5Q14554 519 aa8.9□□□□□ -0.98
SCARB2-220ENST00000640076 LRRC41Q15345 812 aa8.9□□□□□ -0.98
SCARB2-220ENST00000640076 STXBP2Q15833 593 aa8.9□□□□□ -0.98
SCARB2-220ENST00000640076 TMEM266Q2M3C6 531 aa8.9□□□□□ -0.98
SCARB2-220ENST00000640076 CCDC73Q6ZRK6 1079 aa8.9□□□□□ -0.98
SCARB2-220ENST00000640076 ENGASEQ8NFI3 743 aa8.9□□□□□ -0.98
SCARB2-220ENST00000640076 SLC5A5Q92911 643 aa8.9□□□□□ -0.98
SCARB2-220ENST00000640076 SHDQ96IW2 340 aa8.9□□□□□ -0.98
SCARB2-220ENST00000640076 EPSTI1Q96J88 318 aa8.9□□□□□ -0.98
SCARB2-220ENST00000640076 AK8Q96MA6 479 aa8.9□□□□□ -0.98
SCARB2-220ENST00000640076 AGO4Q9HCK5 861 aaKnown RBP8.9□□□□□ -0.98
SCARB2-220ENST00000640076 RNF186Q9NXI6 227 aa8.9□□□□□ -0.98
SCARB2-220ENST00000640076 PCDHA12Q9UN75 941 aa8.9□□□□□ -0.98
SCARB2-220ENST00000640076 HPSEQ9Y251 543 aa8.9□□□□□ -0.98
SCARB2-220ENST00000640076 IPO5O00410 1097 aaKnown RBP8.9□□□□□ -0.99
SCARB2-220ENST00000640076 TRPA1O75762 1119 aa8.9□□□□□ -0.99
SCARB2-220ENST00000640076 C1QTNF8P60827 252 aa8.9□□□□□ -0.99
SCARB2-220ENST00000640076 SPIRE1Q08AE8 756 aa8.9□□□□□ -0.99
SCARB2-220ENST00000640076 SNW1Q13573 536 aaKnown RBP8.9□□□□□ -0.99
SCARB2-220ENST00000640076 C4orf48Q5BLP8 95 aa8.9□□□□□ -0.99
SCARB2-220ENST00000640076 PPP4R4Q6NUP7 873 aa8.9□□□□□ -0.99
SCARB2-220ENST00000640076 ARMCX6Q7L4S7 300 aa8.9□□□□□ -0.99
SCARB2-220ENST00000640076 DPP9Q86TI2 863 aa8.9□□□□□ -0.99
SCARB2-220ENST00000640076 NLRX1Q86UT6 975 aa8.9□□□□□ -0.99
SCARB2-220ENST00000640076 RELL1Q8IUW5 271 aa8.9□□□□□ -0.99
SCARB2-220ENST00000640076 FMR1NBQ8N0W7 255 aaPredicted RBP8.9□□□□□ -0.99
SCARB2-220ENST00000640076 ZNF577Q9BSK1 485 aa8.9□□□□□ -0.99
SCARB2-220ENST00000640076 SRRTQ9BXP5 876 aaKnown RBP8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms