RNA–Protein interactions for RNA: ENST00000636271.1

CHRNA7-212, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,974 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-212ENST00000636271 FAM207AQ9NSI2 230 aaPredicted RBP17.22■□□□□ 0.35
CHRNA7-212ENST00000636271 DDX41Q9UJV9 622 aaKnown RBP17.22■□□□□ 0.35
CHRNA7-212ENST00000636271 CDC23Q9UJX2 597 aa17.22■□□□□ 0.35
CHRNA7-212ENST00000636271 KIAA1217Q5T5P2 1943 aa17.21■□□□□ 0.35
CHRNA7-212ENST00000636271 NFASCO94856 1347 aa17.21■□□□□ 0.35
CHRNA7-212ENST00000636271 SPDYE4A6NLX3 237 aa17.21■□□□□ 0.35
CHRNA7-212ENST00000636271 EIF3CLB5ME19 914 aaKnown RBP17.21■□□□□ 0.35
CHRNA7-212ENST00000636271 IPO7O95373 1038 aaKnown RBP17.21■□□□□ 0.35
CHRNA7-212ENST00000636271 GNA14O95837 355 aa17.21■□□□□ 0.35
CHRNA7-212ENST00000636271 HNRNPH3P31942 346 aaKnown RBP17.21■□□□□ 0.35
CHRNA7-212ENST00000636271 FCGRTP55899 365 aa17.21■□□□□ 0.35
CHRNA7-212ENST00000636271 CCDC62Q6P9F0 684 aa17.21■□□□□ 0.35
CHRNA7-212ENST00000636271 RSRC2Q7L4I2 434 aaKnown RBP17.21■□□□□ 0.35
CHRNA7-212ENST00000636271 KCTD17Q8N5Z5 321 aa17.21■□□□□ 0.35
CHRNA7-212ENST00000636271 BANK1Q8NDB2 785 aa17.21■□□□□ 0.35
CHRNA7-212ENST00000636271 EIF3CQ99613 913 aaKnown RBP17.21■□□□□ 0.35
CHRNA7-212ENST00000636271 ZHX3Q9H4I2 956 aa17.21■□□□□ 0.35
CHRNA7-212ENST00000636271 MMRN2Q9H8L6 949 aa17.21■□□□□ 0.35
CHRNA7-212ENST00000636271 SLC5A4Q9NY91 659 aa17.21■□□□□ 0.35
CHRNA7-212ENST00000636271 GABRQQ9UN88 632 aa17.21■□□□□ 0.35
CHRNA7-212ENST00000636271 PLAGL2Q9UPG8 496 aa17.21■□□□□ 0.35
CHRNA7-212ENST00000636271 SAMM50Q9Y512 469 aa17.21■□□□□ 0.35
CHRNA7-212ENST00000636271 ZSWIM8A7E2V4 1837 aa17.21■□□□□ 0.35
CHRNA7-212ENST00000636271 PLXNA1Q9UIW2 1896 aa17.21■□□□□ 0.35
CHRNA7-212ENST00000636271 ZNF236Q9UL36 1845 aa17.21■□□□□ 0.34
CHRNA7-212ENST00000636271 ZBTB39O15060 712 aa17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 EPHB6O15197 1021 aa17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 TGFB3P10600 412 aa17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 KRT76Q01546 638 aa17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 PPP4R3CPQ6ZMV5 832 aa17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 TPH2Q8IWU9 490 aa17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 SOCS4Q8WXH5 440 aa17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 REEP2Q9BRK0 252 aa17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 OGFRQ9NZT2 677 aa17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 SLC9A2Q9UBY0 812 aa17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 GUCA1BQ9UMX6 200 aa17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 FARP2O94887 1054 aaPredicted RBP17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 HSPA6P17066 643 aa17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 RGS2P41220 211 aa17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 MARSP56192 900 aaKnown RBP17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 CBX1P83916 185 aa17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 EDRF1Q3B7T1 1238 aa17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 ZNF746Q6NUN9 644 aaPredicted RBP17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 KIAA1328Q86T90 577 aa17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 ZC3H3Q8IXZ2 948 aaKnown RBP17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 GOLGA1Q92805 767 aa17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 COPS5Q92905 334 aa17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 ARGLU1Q9NWB6 273 aaPredicted RBP17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 TRIM10Q9UDY6 481 aa17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 SYNGAP1Q96PV0 1343 aa17.2■□□□□ 0.34
CHRNA7-212ENST00000636271 GGPS1O95749 300 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 IGHA2P01877 340 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 CYP2C19P33261 490 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 CLCN6P51797 869 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 ACTR2P61160 394 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 UGCGQ16739 394 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 PRAMEF19Q5SWL8 479 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 TEX35Q5T0J7 233 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 CCDC122Q5T0U0 273 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 GJC2Q5T442 439 aaPredicted RBP17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 SRGAP1Q7Z6B7 1085 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 GPR161Q8N6U8 529 aaKnown RBP17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 CEP112Q8N8E3 955 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 APBA2Q99767 749 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 LXNQ9BS40 222 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 VTA1Q9NP79 307 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 HTTP42858 3142 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 WDR64B1ANS9 1081 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 KRT86O43790 486 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 EYA4O95677 639 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 TXNP10599 105 aaKnown RBP17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 ADCYAP1R1P41586 468 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 FLT3LGP49771 235 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 C1QTNF8P60827 252 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 PRKCZQ05513 592 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 SFR1Q86XK3 245 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 NEK11Q8NG66 645 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 PIGOQ8TEQ8 1089 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 SCFD2Q8WU76 684 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 RABGGTAQ92696 567 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 JAKMIP2Q96AA8 810 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 EDEM3Q9BZQ6 932 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 BHMT2Q9H2M3 363 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 TUFT1Q9NNX1 390 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 PCDHA10Q9Y5I2 948 aa17.19■□□□□ 0.34
CHRNA7-212ENST00000636271 THSD7BQ9C0I4 1608 aa17.18■□□□□ 0.34
CHRNA7-212ENST00000636271 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.18■□□□□ 0.34
CHRNA7-212ENST00000636271 GPR25O00155 361 aa17.18■□□□□ 0.34
CHRNA7-212ENST00000636271 SFNP31947 248 aa17.18■□□□□ 0.34
CHRNA7-212ENST00000636271 CASP5P51878 434 aa17.18■□□□□ 0.34
CHRNA7-212ENST00000636271 JAK3P52333 1124 aa17.18■□□□□ 0.34
CHRNA7-212ENST00000636271 CHMP4BP1P59074 171 aa17.18■□□□□ 0.34
CHRNA7-212ENST00000636271 ACVR2BQ13705 512 aa17.18■□□□□ 0.34
CHRNA7-212ENST00000636271 NEDD9Q14511 834 aa17.18■□□□□ 0.34
CHRNA7-212ENST00000636271 TTLL4Q14679 1199 aa17.18■□□□□ 0.34
CHRNA7-212ENST00000636271 TRIM59Q8IWR1 403 aa17.18■□□□□ 0.34
CHRNA7-212ENST00000636271 MSL3Q8N5Y2 521 aaKnown RBP17.18■□□□□ 0.34
CHRNA7-212ENST00000636271 EHBP1Q8NDI1 1231 aa17.18■□□□□ 0.34
CHRNA7-212ENST00000636271 CD99L2Q8TCZ2 262 aa17.18■□□□□ 0.34
CHRNA7-212ENST00000636271 CCDC42Q96M95 316 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms