RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 GRXCR1A8MXD5 290 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 E9PMD0 336 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 EFCAB14O75071 495 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 EIF4BP23588 611 aaKnown RBP10.84□□□□□ -0.67
LINC00339-210ENST00000635675 DDIT3P35638 169 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 FXR1P51114 621 aaKnown RBP eCLIP10.84□□□□□ -0.67
LINC00339-210ENST00000635675 WDR5P61964 334 aaKnown RBP10.84□□□□□ -0.67
LINC00339-210ENST00000635675 SMAD3P84022 425 aaKnown RBP10.84□□□□□ -0.67
LINC00339-210ENST00000635675 GRB10Q13322 594 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 ATL3Q6DD88 541 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 PADI6Q6TGC4 694 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 FAM43BQ6ZT52 329 aaPredicted RBP10.84□□□□□ -0.67
LINC00339-210ENST00000635675 KCNK18Q7Z418 384 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 RHPN2Q8IUC4 686 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 KSR1Q8IVT5 923 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 KCTD17Q8N5Z5 321 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 PHOSPHO2Q8TCD6 241 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 TCP11Q8WWU5 503 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 CCDC43Q96MW1 224 aaKnown RBP10.84□□□□□ -0.67
LINC00339-210ENST00000635675 MTRQ99707 1265 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 CSRNP2Q9H175 543 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 BHMT2Q9H2M3 363 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 ATP6V0A4Q9HBG4 840 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 ERVK-5Q9HDB9 667 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 BMP2KQ9NSY1 1161 aaPredicted RBP10.84□□□□□ -0.67
LINC00339-210ENST00000635675 DNM3Q9UQ16 869 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 A0A087WZ62 844 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.83□□□□□ -0.68
LINC00339-210ENST00000635675 ARHGEF35A5YM69 484 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 ASAP2O43150 1006 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 USO1O60763 962 aaKnown RBP10.83□□□□□ -0.68
LINC00339-210ENST00000635675 RPS6KA5O75582 802 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 YEATS4O95619 227 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 EYA4O95677 639 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 DARSP14868 501 aaKnown RBP10.83□□□□□ -0.68
LINC00339-210ENST00000635675 ATP2A2P16615 1042 aaKnown RBP10.83□□□□□ -0.68
LINC00339-210ENST00000635675 CYP11B2P19099 503 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 ARL2P36404 184 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 UBA7P41226 1012 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 KCNJ6P48051 423 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 LAMTOR4Q0VGL1 99 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 PAK2Q13177 524 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 STK38Q15208 465 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 FOXD4L6Q3SYB3 417 aaPredicted RBP10.83□□□□□ -0.68
LINC00339-210ENST00000635675 TMEM119Q4V9L6 283 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 FOXD4L3Q6VB84 417 aaPredicted RBP10.83□□□□□ -0.68
LINC00339-210ENST00000635675 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.83□□□□□ -0.68
LINC00339-210ENST00000635675 USP49Q70CQ1 688 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 RTN4RL1Q86UN2 441 aaPredicted RBP10.83□□□□□ -0.68
LINC00339-210ENST00000635675 CABP7Q86V35 215 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 ZNF410Q86VK4 478 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 FAM228AQ86W67 206 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 KRI1Q8N9T8 703 aaKnown RBP10.83□□□□□ -0.68
LINC00339-210ENST00000635675 NLRP7Q8WX94 980 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 PSPC1Q8WXF1 523 aaKnown RBP10.83□□□□□ -0.68
LINC00339-210ENST00000635675 LRCH3Q96II8 777 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 EPSTI1Q96J88 318 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 ZNF668Q96K58 619 aaPredicted RBP10.83□□□□□ -0.68
LINC00339-210ENST00000635675 CLIC6Q96NY7 704 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 SLC9A7Q96T83 725 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 FDXACB1Q9BRP7 624 aaPredicted RBP10.83□□□□□ -0.68
LINC00339-210ENST00000635675 CCSER1Q9C0I3 900 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 NT5C3AQ9H0P0 336 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 TMX1Q9H3N1 280 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 IFT122Q9HBG6 1241 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 ST3GAL5Q9UNP4 418 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 COL4A3BPQ9Y5P4 624 aa10.83□□□□□ -0.68
LINC00339-210ENST00000635675 LAMA3Q16787 3333 aa10.82□□□□□ -0.68
LINC00339-210ENST00000635675 MICAL3Q7RTP6 2002 aa10.82□□□□□ -0.68
LINC00339-210ENST00000635675 ENPP3O14638 875 aa10.82□□□□□ -0.68
LINC00339-210ENST00000635675 GPR182O15218 404 aa10.82□□□□□ -0.68
LINC00339-210ENST00000635675 SPTLC2O15270 562 aa10.82□□□□□ -0.68
LINC00339-210ENST00000635675 PPP6R2O75170 966 aa10.82□□□□□ -0.68
LINC00339-210ENST00000635675 DEFB103AP81534 67 aa10.82□□□□□ -0.68
LINC00339-210ENST00000635675 DNM1Q05193 864 aaKnown RBP10.82□□□□□ -0.68
LINC00339-210ENST00000635675 NFX1Q12986 1120 aaKnown RBP10.82□□□□□ -0.68
LINC00339-210ENST00000635675 MXD4Q14582 209 aaPredicted RBP10.82□□□□□ -0.68
LINC00339-210ENST00000635675 ZRSR1Q15695 479 aaKnown RBP10.82□□□□□ -0.68
LINC00339-210ENST00000635675 SPECC1Q5M775 1068 aa10.82□□□□□ -0.68
LINC00339-210ENST00000635675 ODR4Q5SWX8 454 aa10.82□□□□□ -0.68
LINC00339-210ENST00000635675 HERC6Q8IVU3 1022 aa10.82□□□□□ -0.68
LINC00339-210ENST00000635675 MCPH1Q8NEM0 835 aa10.82□□□□□ -0.68
LINC00339-210ENST00000635675 LINC01599Q8WXQ3 324 aa10.82□□□□□ -0.68
LINC00339-210ENST00000635675 PLIN2Q99541 437 aa10.82□□□□□ -0.68
LINC00339-210ENST00000635675 FTHL17Q9BXU8 183 aa10.82□□□□□ -0.68
LINC00339-210ENST00000635675 GCOM2Q9BZD3 368 aaPredicted RBP10.82□□□□□ -0.68
LINC00339-210ENST00000635675 RCOR1Q9UKL0 485 aa10.82□□□□□ -0.68
LINC00339-210ENST00000635675 CFAP45Q9UL16 551 aa10.82□□□□□ -0.68
LINC00339-210ENST00000635675 PTPRSQ13332 1948 aa10.82□□□□□ -0.68
LINC00339-210ENST00000635675 LAMA2P24043 3122 aaKnown RBP10.81□□□□□ -0.68
LINC00339-210ENST00000635675 CSDE1O75534 798 aaKnown RBP10.81□□□□□ -0.68
LINC00339-210ENST00000635675 AMHP03971 560 aa10.81□□□□□ -0.68
LINC00339-210ENST00000635675 SRGAP2CP0DJJ0 459 aa10.81□□□□□ -0.68
LINC00339-210ENST00000635675 GLRA2P23416 452 aa10.81□□□□□ -0.68
LINC00339-210ENST00000635675 PBX2P40425 430 aa10.81□□□□□ -0.68
LINC00339-210ENST00000635675 POU5F1BQ06416 359 aa10.81□□□□□ -0.68
LINC00339-210ENST00000635675 KARSQ15046 597 aaKnown RBP10.81□□□□□ -0.68
LINC00339-210ENST00000635675 GPR153Q6NV75 609 aa10.81□□□□□ -0.68
LINC00339-210ENST00000635675 C1orf186Q6ZWK4 172 aa10.81□□□□□ -0.68
LINC00339-210ENST00000635675 MAEAQ7L5Y9 396 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms