RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 CD248Q9HCU0 757 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 LMTK3Q96Q04 1460 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 CFAP69A5D8W1 941 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 GOLGA8IPA6NC78 632 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 GOLGA8JA6NMD2 632 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 SFI1A8K8P3 1242 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 PPIP5K2O43314 1243 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 PRKG1Q13976 671 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 TEDDM1Q5T9Z0 273 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 SPOPLQ6IQ16 392 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 HACE1Q8IYU2 909 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 HEMGNQ9BXL5 484 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 SNX5Q9Y5X3 404 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 PLA2R1Q13018 1463 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 NT5C2P49902 561 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 FAM98CQ17RN3 349 aaKnown RBP12.46□□□□□ -0.41
COL11A1-211ENST00000635193 SLC26A7Q8TE54 656 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 SLC7A3Q8WY07 619 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 DDX28Q9NUL7 540 aaKnown RBP12.46□□□□□ -0.41
COL11A1-211ENST00000635193 PRPSAP2O60256 369 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 KPNA2P52292 529 aaKnown RBP12.46□□□□□ -0.41
COL11A1-211ENST00000635193 FMR1Q06787 632 aaKnown RBP eCLIP12.46□□□□□ -0.41
COL11A1-211ENST00000635193 IFRD2Q12894 506 aaPredicted RBP12.46□□□□□ -0.41
COL11A1-211ENST00000635193 TXNRD1Q16881 649 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 HP1BP3Q5SSJ5 553 aaPredicted RBP12.46□□□□□ -0.41
COL11A1-211ENST00000635193 USPL1Q5W0Q7 1092 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 FAM160B1Q5W0V3 765 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 CCNI2Q6ZMN8 369 aaPredicted RBP12.46□□□□□ -0.41
COL11A1-211ENST00000635193 NYAP1Q6ZVC0 841 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 RNF169Q8NCN4 708 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 DNAJC9Q8WXX5 260 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 CHP1Q99653 195 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 FBXO2Q9UK22 296 aaPredicted RBP12.46□□□□□ -0.41
COL11A1-211ENST00000635193 PRR36Q9H6K5 1346 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 NEO1Q92859 1461 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 M0QZ92 97 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 NVLO15381 856 aaKnown RBP12.46□□□□□ -0.41
COL11A1-211ENST00000635193 ZRANB2O95218 330 aaKnown RBP eCLIP12.46□□□□□ -0.41
COL11A1-211ENST00000635193 HSPA4LO95757 839 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 LSP1P33241 339 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 ARL4AP40617 200 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 HDAC4P56524 1084 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 RARS2Q5T160 578 aaKnown RBP12.46□□□□□ -0.41
COL11A1-211ENST00000635193 PDXDC1Q6P996 788 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 SFR1Q86XK3 245 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 STAG2Q8N3U4 1231 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 ZBTB10Q96DT7 871 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 THAP11Q96EK4 314 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 SEC16BQ96JE7 1060 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 MTA3Q9BTC8 594 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 SHROOM2Q13796 1616 aa12.46□□□□□ -0.41
COL11A1-211ENST00000635193 SYCE1LA8MT33 242 aa12.46□□□□□ -0.42
COL11A1-211ENST00000635193 HNRNPCL1O60812 293 aaKnown RBP12.46□□□□□ -0.42
COL11A1-211ENST00000635193 ZBED1O96006 694 aa12.46□□□□□ -0.42
COL11A1-211ENST00000635193 CD58P19256 250 aa12.46□□□□□ -0.42
COL11A1-211ENST00000635193 MRPS15P82914 257 aaKnown RBP12.46□□□□□ -0.42
COL11A1-211ENST00000635193 MED21Q13503 144 aa12.46□□□□□ -0.42
COL11A1-211ENST00000635193 CYLC2Q14093 348 aaPredicted RBP12.46□□□□□ -0.42
COL11A1-211ENST00000635193 NBPF20Q3BBV1 942 aa12.46□□□□□ -0.42
COL11A1-211ENST00000635193 AGGF1Q8N302 714 aaeCLIP12.46□□□□□ -0.42
COL11A1-211ENST00000635193 ENAHQ8N8S7 591 aaPredicted RBP12.46□□□□□ -0.42
COL11A1-211ENST00000635193 GGT7Q9UJ14 662 aa12.46□□□□□ -0.42
COL11A1-211ENST00000635193 MAGED2Q9UNF1 606 aaPredicted RBP12.46□□□□□ -0.42
COL11A1-211ENST00000635193 PPME1Q9Y570 386 aa12.46□□□□□ -0.42
COL11A1-211ENST00000635193 CCDC159P0C7I6 412 aa12.46□□□□□ -0.42
COL11A1-211ENST00000635193 BMP3P12645 472 aa12.46□□□□□ -0.42
COL11A1-211ENST00000635193 SERPINB3P29508 390 aa12.46□□□□□ -0.42
COL11A1-211ENST00000635193 CDK8P49336 464 aa12.46□□□□□ -0.42
COL11A1-211ENST00000635193 SEMA3FQ13275 785 aa12.46□□□□□ -0.42
COL11A1-211ENST00000635193 TFDP1Q14186 410 aa12.46□□□□□ -0.42
COL11A1-211ENST00000635193 STOX1Q6ZVD7 989 aa12.46□□□□□ -0.42
COL11A1-211ENST00000635193 RIN2Q8WYP3 895 aaPredicted RBP12.46□□□□□ -0.42
COL11A1-211ENST00000635193 RBM41Q96IZ5 413 aaKnown RBP12.46□□□□□ -0.42
COL11A1-211ENST00000635193 TBC1D23Q9NUY8 699 aa12.46□□□□□ -0.42
COL11A1-211ENST00000635193 CFAP74Q9C0B2 1584 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 LOC102724428A0A0B4J2F2 783 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 TLR3O15455 904 aaKnown RBP12.45□□□□□ -0.42
COL11A1-211ENST00000635193 SUPT3HO75486 399 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 ABCD1P33897 745 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 SERPINB4P48594 390 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 SIK1P57059 783 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 TFAMQ00059 246 aaKnown RBP12.45□□□□□ -0.42
COL11A1-211ENST00000635193 EXOSC10Q01780 885 aaKnown RBP12.45□□□□□ -0.42
COL11A1-211ENST00000635193 KLHL38Q2WGJ6 581 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 SYDE2Q5VT97 1194 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 TC2NQ8N9U0 490 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 FAM149B1Q96BN6 582 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 ZWILCHQ9H900 591 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 ITIH6Q6UXX5 1313 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 REREQ9P2R6 1566 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 HSPA9P38646 679 aaKnown RBP12.45□□□□□ -0.42
COL11A1-211ENST00000635193 NOP14P78316 857 aaKnown RBP12.45□□□□□ -0.42
COL11A1-211ENST00000635193 SLC44A4Q53GD3 710 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 TBC1D9BQ66K14 1250 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.45□□□□□ -0.42
COL11A1-211ENST00000635193 FAF2Q96CS3 445 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 KIF9Q9HAQ2 790 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 SLC38A10Q9HBR0 1119 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 STK32BQ9NY57 414 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 DONSONQ9NYP3 566 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms