RNA–Protein interactions for RNA: ENST00000628090.1

LINC01943-202, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 5 BASIC

Gene LINC01943, Length 926 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-202ENST00000628090 LCTP09848 1927 aa11.17□□□□□ -0.62
LINC01943-202ENST00000628090 DNAJC25-GNG10A0A024R161 153 aa11.17□□□□□ -0.62
LINC01943-202ENST00000628090 SOWAHBA6NEL2 793 aa11.17□□□□□ -0.62
LINC01943-202ENST00000628090 EIF3DO15371 548 aaKnown RBP eCLIP11.17□□□□□ -0.62
LINC01943-202ENST00000628090 ATP9AO75110 1047 aa11.17□□□□□ -0.62
LINC01943-202ENST00000628090 GCNT3O95395 438 aa11.17□□□□□ -0.62
LINC01943-202ENST00000628090 PGK1P00558 417 aa11.17□□□□□ -0.62
LINC01943-202ENST00000628090 SUPT20HL2P0C7V6 817 aa11.17□□□□□ -0.62
LINC01943-202ENST00000628090 ZNF865P0CJ78 1059 aaPredicted RBP11.17□□□□□ -0.62
LINC01943-202ENST00000628090 MAPTP10636 758 aaKnown RBP11.17□□□□□ -0.62
LINC01943-202ENST00000628090 SFPQP23246 707 aaKnown RBP eCLIP11.17□□□□□ -0.62
LINC01943-202ENST00000628090 ACTR2P61160 394 aa11.17□□□□□ -0.62
LINC01943-202ENST00000628090 IRX5P78411 483 aaPredicted RBP11.17□□□□□ -0.62
LINC01943-202ENST00000628090 FKBP3Q00688 224 aaKnown RBP11.17□□□□□ -0.62
LINC01943-202ENST00000628090 RAD51AP2Q09MP3 1159 aa11.17□□□□□ -0.62
LINC01943-202ENST00000628090 TSR1Q2NL82 804 aaKnown RBP11.17□□□□□ -0.62
LINC01943-202ENST00000628090 XKR3Q5GH77 459 aa11.17□□□□□ -0.62
LINC01943-202ENST00000628090 CDKAL1Q5VV42 579 aa11.17□□□□□ -0.62
LINC01943-202ENST00000628090 C1orf186Q6ZWK4 172 aa11.17□□□□□ -0.62
LINC01943-202ENST00000628090 CYFIP1Q7L576 1253 aa11.17□□□□□ -0.62
LINC01943-202ENST00000628090 FILIP1Q7Z7B0 1213 aa11.17□□□□□ -0.62
LINC01943-202ENST00000628090 DHX37Q8IY37 1157 aaKnown RBP11.17□□□□□ -0.62
LINC01943-202ENST00000628090 MSL3Q8N5Y2 521 aaKnown RBP11.17□□□□□ -0.62
LINC01943-202ENST00000628090 ARRDC4Q8NCT1 418 aa11.17□□□□□ -0.62
LINC01943-202ENST00000628090 MCPH1Q8NEM0 835 aa11.17□□□□□ -0.62
LINC01943-202ENST00000628090 SEPT1Q8WYJ6 367 aa11.17□□□□□ -0.62
LINC01943-202ENST00000628090 KIFAP3Q92845 792 aa11.17□□□□□ -0.62
LINC01943-202ENST00000628090 IQCDQ96DY2 449 aa11.17□□□□□ -0.62
LINC01943-202ENST00000628090 CEP63Q96MT8 703 aa11.17□□□□□ -0.62
LINC01943-202ENST00000628090 VTA1Q9NP79 307 aa11.17□□□□□ -0.62
LINC01943-202ENST00000628090 SAMSN1Q9NSI8 373 aaKnown RBP11.17□□□□□ -0.62
LINC01943-202ENST00000628090 EXOC7Q9UPT5 735 aa11.17□□□□□ -0.62
LINC01943-202ENST00000628090 ATP11BQ9Y2G3 1177 aa11.17□□□□□ -0.62
LINC01943-202ENST00000628090 WDR81Q562E7 1941 aa11.17□□□□□ -0.62
LINC01943-202ENST00000628090 CHD9Q3L8U1 2897 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 PRUNE2Q8WUY3 3088 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 ESPNB1AK53 854 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 CETN3O15182 167 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 AP5Z1O43299 807 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 DGAT1O75907 488 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 SNAI1O95863 264 aaPredicted RBP11.16□□□□□ -0.62
LINC01943-202ENST00000628090 ATP1A3P13637 1013 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 SP4Q02446 784 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 EHHADHQ08426 723 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 KNOP1Q1ED39 458 aaKnown RBP11.16□□□□□ -0.62
LINC01943-202ENST00000628090 EDRF1Q3B7T1 1238 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 CCDC40Q4G0X9 1142 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 ARSHQ5FYA8 562 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 ODR4Q5SWX8 454 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 SPECC1LQ69YQ0 1117 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 ANKRD40Q6AI12 368 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 SWSAP1Q6NVH7 229 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 METTL7BQ6UX53 244 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 HS2ST1Q7LGA3 356 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 CCDC186Q7Z3E2 898 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 SFR1Q86XK3 245 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 VSTM4Q8IW00 320 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 TDHQ8IZJ6 230 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 SYCP3Q8IZU3 236 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 KIAA0895Q8NCT3 520 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 CCDC112Q8NEF3 446 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 MORC4Q8TE76 937 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 LRRC15Q8TF66 581 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 CEP170P1Q96L14 293 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 IFT74Q96LB3 600 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 JPH2Q9BR39 696 aaPredicted RBP11.16□□□□□ -0.62
LINC01943-202ENST00000628090 RUSC1Q9BVN2 902 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 TMEM206Q9H813 350 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 C17orf75Q9HAS0 396 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 TBC1D7Q9P0N9 293 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 CGNQ9P2M7 1197 aaKnown RBP11.16□□□□□ -0.62
LINC01943-202ENST00000628090 SEPT9Q9UHD8 586 aaPredicted RBP11.16□□□□□ -0.62
LINC01943-202ENST00000628090 ZKSCAN5Q9Y2L8 839 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 EYSQ5T1H1 3165 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 CDH23Q9H251 3354 aa11.16□□□□□ -0.62
LINC01943-202ENST00000628090 NPHP3-ACAD11A0A0J9YXS1 232 aa11.15□□□□□ -0.62
LINC01943-202ENST00000628090 A0A1B0GTH6 734 aa11.15□□□□□ -0.62
LINC01943-202ENST00000628090 TRIM43BA6NCK2 446 aa11.15□□□□□ -0.62
LINC01943-202ENST00000628090 KBTBD13C9JR72 458 aa11.15□□□□□ -0.62
LINC01943-202ENST00000628090 PDXKO00764 312 aa11.15□□□□□ -0.62
LINC01943-202ENST00000628090 NKRFO15226 690 aaKnown RBP eCLIP11.15□□□□□ -0.62
LINC01943-202ENST00000628090 CCP110O43303 1012 aa11.15□□□□□ -0.62
LINC01943-202ENST00000628090 USO1O60763 962 aaKnown RBP11.15□□□□□ -0.62
LINC01943-202ENST00000628090 HIP1RO75146 1068 aa11.15□□□□□ -0.62
LINC01943-202ENST00000628090 GGPS1O95749 300 aa11.15□□□□□ -0.62
LINC01943-202ENST00000628090 CCNE2O96020 404 aa11.15□□□□□ -0.62
LINC01943-202ENST00000628090 RFC5P40937 340 aa11.15□□□□□ -0.62
LINC01943-202ENST00000628090 RARRES1P49788 294 aa11.15□□□□□ -0.62
LINC01943-202ENST00000628090 SLC26A2P50443 739 aa11.15□□□□□ -0.62
LINC01943-202ENST00000628090 DNM2P50570 870 aa11.15□□□□□ -0.62
LINC01943-202ENST00000628090 COPB1P53618 953 aaKnown RBP11.15□□□□□ -0.62
LINC01943-202ENST00000628090 SNRPFP62306 86 aaKnown RBP11.15□□□□□ -0.62
LINC01943-202ENST00000628090 PPP2R3AQ06190 1150 aa11.15□□□□□ -0.62
LINC01943-202ENST00000628090 DMP1Q13316 513 aaPredicted RBP11.15□□□□□ -0.62
LINC01943-202ENST00000628090 LAMC2Q13753 1193 aa11.15□□□□□ -0.62
LINC01943-202ENST00000628090 LRIT3Q3SXY7 679 aa11.15□□□□□ -0.62
LINC01943-202ENST00000628090 TRIM60Q495X7 471 aa11.15□□□□□ -0.62
LINC01943-202ENST00000628090 HSP90AA4PQ58FG1 418 aa11.15□□□□□ -0.62
LINC01943-202ENST00000628090 FAM102BQ5T8I3 360 aa11.15□□□□□ -0.62
LINC01943-202ENST00000628090 TTI2Q6NXR4 508 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms