RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 RPS6KB1P23443 525 aa16.34■□□□□ 0.21
TUBB3-215ENST00000625617 HSPA4P34932 840 aa16.34■□□□□ 0.21
TUBB3-215ENST00000625617 JAK3P52333 1124 aa16.34■□□□□ 0.21
TUBB3-215ENST00000625617 LRCH2Q5VUJ6 765 aa16.34■□□□□ 0.21
TUBB3-215ENST00000625617 ECHDC2Q86YB7 292 aa16.34■□□□□ 0.21
TUBB3-215ENST00000625617 RNF169Q8NCN4 708 aa16.34■□□□□ 0.21
TUBB3-215ENST00000625617 SUSD6Q92537 303 aa16.34■□□□□ 0.21
TUBB3-215ENST00000625617 CCDC136Q96JN2 1154 aa16.34■□□□□ 0.21
TUBB3-215ENST00000625617 ZNF668Q96K58 619 aaPredicted RBP16.34■□□□□ 0.21
TUBB3-215ENST00000625617 RPGRIP1Q96KN7 1286 aa16.34■□□□□ 0.21
TUBB3-215ENST00000625617 CASD1Q96PB1 797 aa16.34■□□□□ 0.21
TUBB3-215ENST00000625617 RIT2Q99578 217 aa16.34■□□□□ 0.21
TUBB3-215ENST00000625617 NRBP2Q9NSY0 501 aa16.34■□□□□ 0.21
TUBB3-215ENST00000625617 RNF19AQ9NV58 838 aa16.34■□□□□ 0.21
TUBB3-215ENST00000625617 TMEM221A6NGB7 291 aa16.33■□□□□ 0.2
TUBB3-215ENST00000625617 M0R296 226 aa16.33■□□□□ 0.2
TUBB3-215ENST00000625617 MSH4O15457 936 aa16.33■□□□□ 0.2
TUBB3-215ENST00000625617 DARSP14868 501 aaKnown RBP16.33■□□□□ 0.2
TUBB3-215ENST00000625617 IFNAR1P17181 557 aa16.33■□□□□ 0.2
TUBB3-215ENST00000625617 SFNP31947 248 aa16.33■□□□□ 0.2
TUBB3-215ENST00000625617 PBX3P40426 434 aa16.33■□□□□ 0.2
TUBB3-215ENST00000625617 MRE11P49959 708 aa16.33■□□□□ 0.2
TUBB3-215ENST00000625617 GPC3P51654 580 aa16.33■□□□□ 0.2
TUBB3-215ENST00000625617 TBC1D8BQ0IIM8 1120 aa16.33■□□□□ 0.2
TUBB3-215ENST00000625617 NTRK3Q16288 839 aa16.33■□□□□ 0.2
TUBB3-215ENST00000625617 UGCGQ16739 394 aa16.33■□□□□ 0.2
TUBB3-215ENST00000625617 KCNT2Q6UVM3 1135 aa16.33■□□□□ 0.2
TUBB3-215ENST00000625617 TRIM67Q6ZTA4 783 aa16.33■□□□□ 0.2
TUBB3-215ENST00000625617 FBXL16Q8N461 479 aa16.33■□□□□ 0.2
TUBB3-215ENST00000625617 NLRP7Q8WX94 980 aa16.33■□□□□ 0.2
TUBB3-215ENST00000625617 TEKT3Q9BXF9 490 aa16.33■□□□□ 0.2
TUBB3-215ENST00000625617 AGXT2Q9BYV1 514 aa16.33■□□□□ 0.2
TUBB3-215ENST00000625617 NGRNQ9NPE2 291 aaKnown RBP16.33■□□□□ 0.2
TUBB3-215ENST00000625617 PSMA5P28066 241 aa16.32■□□□□ 0.2
TUBB3-215ENST00000625617 TECP42680 631 aa16.32■□□□□ 0.2
TUBB3-215ENST00000625617 USP11P51784 963 aa16.32■□□□□ 0.2
TUBB3-215ENST00000625617 ZXDAP98168 799 aa16.32■□□□□ 0.2
TUBB3-215ENST00000625617 KRT17Q04695 432 aa16.32■□□□□ 0.2
TUBB3-215ENST00000625617 CLLU1OSQ5K130 101 aa16.32■□□□□ 0.2
TUBB3-215ENST00000625617 ANKRD54Q6NXT1 300 aa16.32■□□□□ 0.2
TUBB3-215ENST00000625617 LLGL2Q6P1M3 1020 aa16.32■□□□□ 0.2
TUBB3-215ENST00000625617 LRRC55Q6ZSA7 311 aa16.32■□□□□ 0.2
TUBB3-215ENST00000625617 BMP8AQ7Z5Y6 402 aa16.32■□□□□ 0.2
TUBB3-215ENST00000625617 SUGP1Q8IWZ8 645 aaKnown RBP16.32■□□□□ 0.2
TUBB3-215ENST00000625617 SLC5A5Q92911 643 aa16.32■□□□□ 0.2
TUBB3-215ENST00000625617 UNC45AQ9H3U1 944 aa16.32■□□□□ 0.2
TUBB3-215ENST00000625617 NCOA5Q9HCD5 579 aaKnown RBP16.32■□□□□ 0.2
TUBB3-215ENST00000625617 PLXNA4Q9HCM2 1894 aa16.32■□□□□ 0.2
TUBB3-215ENST00000625617 SPG21Q9NZD8 308 aa16.32■□□□□ 0.2
TUBB3-215ENST00000625617 SEPT9Q9UHD8 586 aaPredicted RBP16.32■□□□□ 0.2
TUBB3-215ENST00000625617 HIDE1A8MVS5 230 aa16.31■□□□□ 0.2
TUBB3-215ENST00000625617 NLRP5P59047 1200 aa16.31■□□□□ 0.2
TUBB3-215ENST00000625617 KCNC3Q14003 757 aa16.31■□□□□ 0.2
TUBB3-215ENST00000625617 TMEM184AQ6ZMB5 413 aa16.31■□□□□ 0.2
TUBB3-215ENST00000625617 TRIM22Q8IYM9 498 aa16.31■□□□□ 0.2
TUBB3-215ENST00000625617 RDM1Q8NG50 284 aa16.31■□□□□ 0.2
TUBB3-215ENST00000625617 PBXIP1Q96AQ6 731 aa16.31■□□□□ 0.2
TUBB3-215ENST00000625617 MRPL9Q9BYD2 267 aaKnown RBP16.31■□□□□ 0.2
TUBB3-215ENST00000625617 C22orf23Q9BZE7 217 aa16.31■□□□□ 0.2
TUBB3-215ENST00000625617 SH3GLB2Q9NR46 395 aa16.31■□□□□ 0.2
TUBB3-215ENST00000625617 DACT1Q9NYF0 836 aa16.31■□□□□ 0.2
TUBB3-215ENST00000625617 LOXHD1Q8IVV2 1947 aa16.3■□□□□ 0.2
TUBB3-215ENST00000625617 A0A0U1RQF3 1178 aa16.3■□□□□ 0.2
TUBB3-215ENST00000625617 EDIL3O43854 480 aa16.3■□□□□ 0.2
TUBB3-215ENST00000625617 REC8O95072 547 aa16.3■□□□□ 0.2
TUBB3-215ENST00000625617 HOXB8P17481 243 aaPredicted RBP16.3■□□□□ 0.2
TUBB3-215ENST00000625617 FGFR4P22455 802 aa16.3■□□□□ 0.2
TUBB3-215ENST00000625617 PDIA3P30101 505 aaKnown RBP16.3■□□□□ 0.2
TUBB3-215ENST00000625617 CCT2P78371 535 aaKnown RBP16.3■□□□□ 0.2
TUBB3-215ENST00000625617 SMC1AQ14683 1233 aaKnown RBP16.3■□□□□ 0.2
TUBB3-215ENST00000625617 MIER3Q7Z3K6 550 aa16.3■□□□□ 0.2
TUBB3-215ENST00000625617 TMC7Q7Z402 723 aa16.3■□□□□ 0.2
TUBB3-215ENST00000625617 SLC39A11Q8N1S5 342 aa16.3■□□□□ 0.2
TUBB3-215ENST00000625617 HELQQ8TDG4 1101 aa16.3■□□□□ 0.2
TUBB3-215ENST00000625617 TBCKQ8TEA7 893 aa16.3■□□□□ 0.2
TUBB3-215ENST00000625617 GJA10Q969M2 543 aa16.3■□□□□ 0.2
TUBB3-215ENST00000625617 APOL5Q9BWW9 433 aa16.3■□□□□ 0.2
TUBB3-215ENST00000625617 S1PR5Q9H228 398 aa16.3■□□□□ 0.2
TUBB3-215ENST00000625617 FNDC1Q4ZHG4 1894 aaPredicted RBP16.3■□□□□ 0.2
TUBB3-215ENST00000625617 TECTAO75443 2155 aa16.3■□□□□ 0.2
TUBB3-215ENST00000625617 PSMD10O75832 226 aa16.29■□□□□ 0.2
TUBB3-215ENST00000625617 TDP2O95551 362 aa16.29■□□□□ 0.2
TUBB3-215ENST00000625617 EOMESO95936 686 aa16.29■□□□□ 0.2
TUBB3-215ENST00000625617 SFPQP23246 707 aaKnown RBP eCLIP16.29■□□□□ 0.2
TUBB3-215ENST00000625617 SIGLEC14Q08ET2 396 aa16.29■□□□□ 0.2
TUBB3-215ENST00000625617 DRP2Q13474 957 aa16.29■□□□□ 0.2
TUBB3-215ENST00000625617 TARBP2Q15633 366 aaKnown RBP16.29■□□□□ 0.2
TUBB3-215ENST00000625617 MTERF2Q49AM1 385 aa16.29■□□□□ 0.2
TUBB3-215ENST00000625617 XKR3Q5GH77 459 aa16.29■□□□□ 0.2
TUBB3-215ENST00000625617 SYCE2Q6PIF2 218 aa16.29■□□□□ 0.2
TUBB3-215ENST00000625617 ZNF598Q86UK7 904 aaKnown RBP16.29■□□□□ 0.2
TUBB3-215ENST00000625617 CASP10Q92851 521 aa16.29■□□□□ 0.2
TUBB3-215ENST00000625617 GCOM2Q9BZD3 368 aaPredicted RBP16.29■□□□□ 0.2
TUBB3-215ENST00000625617 PCDHA4Q9UN74 947 aa16.29■□□□□ 0.2
TUBB3-215ENST00000625617 C5orf42Q9H799 3197 aa16.29■□□□□ 0.2
TUBB3-215ENST00000625617 ZNF318Q5VUA4 2279 aa16.29■□□□□ 0.2
TUBB3-215ENST00000625617 SP100P23497 879 aaPredicted RBP16.28■□□□□ 0.2
TUBB3-215ENST00000625617 CA8P35219 290 aa16.28■□□□□ 0.2
TUBB3-215ENST00000625617 DNM2P50570 870 aa16.28■□□□□ 0.2
TUBB3-215ENST00000625617 PTPN5P54829 565 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms