RNA–Protein interactions for RNA: ENST00000624138.3

LINC00963-218, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 261 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-218ENST00000624138 CLLU1OSQ5K130 101 aa8.3□□□□□ -1.08
LINC00963-218ENST00000624138 SPECC1Q5M775 1068 aa8.3□□□□□ -1.08
LINC00963-218ENST00000624138 USP17L6PQ6QN14 398 aa8.3□□□□□ -1.08
LINC00963-218ENST00000624138 DDX53Q86TM3 631 aaKnown RBP8.3□□□□□ -1.08
LINC00963-218ENST00000624138 ECHDC2Q86YB7 292 aa8.3□□□□□ -1.08
LINC00963-218ENST00000624138 CMASQ8NFW8 434 aaPredicted RBP8.3□□□□□ -1.08
LINC00963-218ENST00000624138 PJA1Q8NG27 643 aa8.3□□□□□ -1.08
LINC00963-218ENST00000624138 SMARCC2Q8TAQ2 1214 aa8.3□□□□□ -1.08
LINC00963-218ENST00000624138 RSAD2Q8WXG1 361 aa8.3□□□□□ -1.08
LINC00963-218ENST00000624138 AUTS2Q8WXX7 1259 aa8.3□□□□□ -1.08
LINC00963-218ENST00000624138 CHAMP1Q96JM3 812 aa8.3□□□□□ -1.08
LINC00963-218ENST00000624138 RHOBTB2Q9BYZ6 727 aa8.3□□□□□ -1.08
LINC00963-218ENST00000624138 KRT23Q9C075 422 aa8.3□□□□□ -1.08
LINC00963-218ENST00000624138 AZI2Q9H6S1 392 aa8.3□□□□□ -1.08
LINC00963-218ENST00000624138 JADE2Q9NQC1 790 aa8.3□□□□□ -1.08
LINC00963-218ENST00000624138 EPS15L1Q9UBC2 864 aa8.3□□□□□ -1.08
LINC00963-218ENST00000624138 SLC9A2Q9UBY0 812 aa8.3□□□□□ -1.08
LINC00963-218ENST00000624138 FBXO4Q9UKT5 387 aa8.3□□□□□ -1.08
LINC00963-218ENST00000624138 GINS2Q9Y248 185 aa8.3□□□□□ -1.08
LINC00963-218ENST00000624138 COL1A2P08123 1366 aa8.3□□□□□ -1.08
LINC00963-218ENST00000624138 COL4A3Q01955 1670 aa8.3□□□□□ -1.08
LINC00963-218ENST00000624138 NFASCO94856 1347 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 FASNP49327 2511 aaKnown RBP8.29□□□□□ -1.08
LINC00963-218ENST00000624138 IGKV6D-21A0A0A0MT36 114 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 HBP1O60381 514 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 LILRB5O75023 590 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 GPR32O75388 356 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 PAPLNO95428 1278 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 RFX1P22670 979 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 CA8P35219 290 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 ALDH7A1P49419 539 aaKnown RBP8.29□□□□□ -1.08
LINC00963-218ENST00000624138 SLC26A2P50443 739 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 METAP2P50579 478 aaKnown RBP eCLIP8.29□□□□□ -1.08
LINC00963-218ENST00000624138 CLCN4P51793 760 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 MFAP1P55081 439 aaKnown RBP8.29□□□□□ -1.08
LINC00963-218ENST00000624138 STARD6P59095 220 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 MTMR1Q13613 665 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 CYP26C1Q6V0L0 522 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 ZNF598Q86UK7 904 aaKnown RBP8.29□□□□□ -1.08
LINC00963-218ENST00000624138 ABI1Q8IZP0 508 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 ZBTB44Q8NCP5 570 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 GPR152Q8TDT2 470 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 NELL1Q92832 810 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 CUL5Q93034 780 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 SECISBP2LQ93073 1101 aaKnown RBP8.29□□□□□ -1.08
LINC00963-218ENST00000624138 TMEM169Q96HH4 297 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 OSMRQ99650 979 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 UBAC1Q9BSL1 405 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 EPC1Q9H2F5 836 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 CNNM2Q9H8M5 875 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 JPH1Q9HDC5 661 aaPredicted RBP8.29□□□□□ -1.08
LINC00963-218ENST00000624138 WDR6Q9NNW5 1121 aaKnown RBP8.29□□□□□ -1.08
LINC00963-218ENST00000624138 ARHGEF3Q9NR81 526 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 SLC2A4RGQ9NR83 387 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 RALYQ9UKM9 306 aaKnown RBP8.29□□□□□ -1.08
LINC00963-218ENST00000624138 PCDHGA2Q9Y5H1 932 aa8.29□□□□□ -1.08
LINC00963-218ENST00000624138 A0A0U1RQF3 1178 aa8.28□□□□□ -1.08
LINC00963-218ENST00000624138 CARNS1A5YM72 827 aa8.28□□□□□ -1.08
LINC00963-218ENST00000624138 ZBTB42B2RXF5 422 aa8.28□□□□□ -1.08
LINC00963-218ENST00000624138 LILRB3O75022 631 aa8.28□□□□□ -1.08
LINC00963-218ENST00000624138 ZSCAN20P17040 1043 aaPredicted RBP8.28□□□□□ -1.08
LINC00963-218ENST00000624138 PDE1AP54750 535 aa8.28□□□□□ -1.08
LINC00963-218ENST00000624138 ACTR2P61160 394 aa8.28□□□□□ -1.08
LINC00963-218ENST00000624138 HNRNPUQ00839 825 aaKnown RBP eCLIP8.28□□□□□ -1.082e-9■■■□□ 15
LINC00963-218ENST00000624138 WTAPQ15007 396 aa8.28□□□□□ -1.08
LINC00963-218ENST00000624138 PTPN14Q15678 1187 aa8.28□□□□□ -1.08
LINC00963-218ENST00000624138 KIZQ2M2Z5 673 aa8.28□□□□□ -1.08
LINC00963-218ENST00000624138 ZNF484Q5JVG2 852 aa8.28□□□□□ -1.08
LINC00963-218ENST00000624138 C20orf194Q5TEA3 1177 aa8.28□□□□□ -1.08
LINC00963-218ENST00000624138 DCLRE1AQ6PJP8 1040 aa8.28□□□□□ -1.08
LINC00963-218ENST00000624138 TMEM173Q86WV6 379 aaPredicted RBP8.28□□□□□ -1.08
LINC00963-218ENST00000624138 TMEM87AQ8NBN3 555 aa8.28□□□□□ -1.08
LINC00963-218ENST00000624138 IGSF21Q96ID5 467 aa8.28□□□□□ -1.08
LINC00963-218ENST00000624138 KLHL5Q96PQ7 755 aa8.28□□□□□ -1.08
LINC00963-218ENST00000624138 MRPL9Q9BYD2 267 aaKnown RBP8.28□□□□□ -1.08
LINC00963-218ENST00000624138 PKD2L1Q9P0L9 805 aa8.28□□□□□ -1.08
LINC00963-218ENST00000624138 ASPMQ8IZT6 3477 aa8.27□□□□□ -1.09
LINC00963-218ENST00000624138 ANHXE9PGG2 379 aa8.27□□□□□ -1.09
LINC00963-218ENST00000624138 SLC30A4O14863 429 aa8.27□□□□□ -1.09
LINC00963-218ENST00000624138 LAMTOR5O43504 91 aa8.27□□□□□ -1.09
LINC00963-218ENST00000624138 TBC1D4O60343 1298 aa8.27□□□□□ -1.09
LINC00963-218ENST00000624138 LRRN2O75325 713 aa8.27□□□□□ -1.09
LINC00963-218ENST00000624138 GALTP07902 379 aa8.27□□□□□ -1.09
LINC00963-218ENST00000624138 GBP2P32456 591 aaPredicted RBP8.27□□□□□ -1.09
LINC00963-218ENST00000624138 TROAPQ12815 778 aa8.27□□□□□ -1.09
LINC00963-218ENST00000624138 PPM1JQ5JR12 505 aa8.27□□□□□ -1.09
LINC00963-218ENST00000624138 PPP4R3CPQ6ZMV5 832 aa8.27□□□□□ -1.09
LINC00963-218ENST00000624138 CYB5R4Q7L1T6 521 aa8.27□□□□□ -1.09
LINC00963-218ENST00000624138 HELQQ8TDG4 1101 aa8.27□□□□□ -1.09
LINC00963-218ENST00000624138 ATRIPQ8WXE1 791 aa8.27□□□□□ -1.09
LINC00963-218ENST00000624138 RSPH1Q8WYR4 309 aa8.27□□□□□ -1.09
LINC00963-218ENST00000624138 STAMQ92783 540 aa8.27□□□□□ -1.09
LINC00963-218ENST00000624138 SHDQ96IW2 340 aa8.27□□□□□ -1.09
LINC00963-218ENST00000624138 MYADMQ96S97 322 aa8.27□□□□□ -1.09
LINC00963-218ENST00000624138 DDX23Q9BUQ8 820 aaKnown RBP8.27□□□□□ -1.09
LINC00963-218ENST00000624138 VN1R3Q9BXE9 311 aa8.27□□□□□ -1.09
LINC00963-218ENST00000624138 EMILIN2Q9BXX0 1053 aa8.27□□□□□ -1.09
LINC00963-218ENST00000624138 OSBPL6Q9BZF3 934 aa8.27□□□□□ -1.09
LINC00963-218ENST00000624138 FOXQ1Q9C009 403 aa8.27□□□□□ -1.09
LINC00963-218ENST00000624138 PARD6AQ9NPB6 346 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms